Array 1 510299-513307 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHBGI010000001.1 Litoribacter ruber strain KCTC 22899 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 510299 46 100.0 30 .............................................. TCACCACCTTCACTAAATAAAGTCCCACCA 510375 46 100.0 30 .............................................. CGGGTGGCAAACCTTCTGAAAGCCGTTAGG 510451 46 100.0 30 .............................................. TTGAGCCAATCCCTGATGCGCTCCACCCTG 510527 46 97.8 30 .........................................C.... TTGAGCCAATCCCTGATGCGCTCCACCCTG 510603 46 95.7 30 .............A...........................C.... TTGAGCCAATCCCTGATGCGCTCCACCCTG 510679 46 95.7 30 .............A...........................C.... TTGAGCCAATCCCTGATGCGCTCCACCCTG 510755 46 100.0 30 .............................................. ACTCGTTTATGACTAAGTCATTGGTCACGT 510831 46 97.8 30 ....C......................................... GAAGTGGTCAGCGTGATTTGGGACACCCCT 510907 46 97.8 30 ......................................G....... CCCTCAGCAACCACACAGCAACTTTTAATG 510983 46 97.8 30 ......................................G....... CCCTCAGCAACCACACAGCAACTTTTAATG 511059 46 100.0 30 .............................................. CCCTCAGCAACCACACAGCAACTTTTAATG 511135 46 100.0 30 .............................................. GAAGAGGTAAGCGTGATTTGGGACACCCCT 511211 46 100.0 31 .............................................. CGGATATTGACATCGCTCATGTCGTCAGCAA 511288 46 100.0 30 .............................................. AGGTCAATCGGGTTGATCACAACCCCAGCG 511364 46 100.0 30 .............................................. GGCGTTCGTGCGCGCCGTTGTGGTGTTTGT 511440 46 97.8 30 ................................T............. TTTCCGCCGATGGCATACCCGGGCCGAGGG 511516 46 97.8 30 ......................C....................... TTTCCGCCGATGGCATACCCGGGCCGAGGG 511592 46 100.0 30 .............................................. TTTCCGCCGATGGCATACCCGGGCCGATGG 511668 46 100.0 30 .............................................. AGGTCAATCGGCTTGATCACAACCCCAGCG 511744 46 95.7 30 ..........................A................T.. GGAGTTCTTTCGCCCCTTTTTGTTGTTTGT 511820 46 97.8 30 .....................G........................ GGAGTTCGTGCGCGCCGGTTTGGTGTTTGT 511896 46 97.8 30 .....................G........................ GGAGTTCGTGCGCGCCGGTTTGGTGTTTGT 511972 46 100.0 30 .............................................. GGAGTTCGTGCGCGCCGTTTTGGTGTTTGT 512048 46 100.0 30 .............................................. TAGGATTCGAGTAGCCTGTAGTACTTCTCT 512124 46 100.0 30 .............................................. GACTAGGACGGTGATCATTGGATTCTGGTT 512200 46 97.8 30 ............................................T. GACTAGGACGGTGATCATTGGATTCTGGTT 512276 46 95.7 30 ......C...............T....................... GGTTTGGATGTATGGGCTTTTTCGGCGCTG 512352 46 97.8 30 .............A................................ GACTAGGACGGTGATCATTGGATTCTGGGT 512428 46 100.0 30 .............................................. GGGTTGGATGTATGGGCTTTTTCGGCGCTG 512504 46 100.0 29 .............................................. GGTAACAGCCACGTTGCGGCAACCCAGCA 512579 46 100.0 29 .............................................. CTAGCCAGGAAATTCAAGCCCATCTCCCA 512654 46 100.0 30 .............................................. ATGTTGATCCGGAAATTTACCCGGAGATTT 512730 46 100.0 30 .............................................. ATGGTCAAGATCATTCAGGGGGAAGGTGAC 512806 46 100.0 30 .............................................. AACCGGTGAAGAAAGACTTAAACCCACCTT 512882 46 100.0 30 .............................................. ACATCCACGCAGCTATAAAAGGGCCGGACA 512958 46 97.8 30 ...........................................C.. GGCATTTGTGTTGTTTTGGTTCAAAAACTG 513034 46 97.8 30 ......................G....................... ACATCCACGCAGCTATAAAAGGGCCGGACA 513110 46 100.0 30 .............................................. GGCATTTGTGTTGTTTTGGTTCAAAAACTG 513186 46 97.8 30 ......................G....................... TTAGCCTTCTGGCTCTTCACTAGCAAACGT 513262 46 91.3 0 A....................................T.C..T... | ========== ====== ====== ====== ============================================== =============================== ================== 40 46 98.6 30 GCTGTGATATCCTTAGTAAGGTACAATTTTGAAAGCAATTCACAAC # Left flank : TTGAGTGTTATTTGGGAACGAGCAGGAAAATTATTTACCCGGAATATGGATGAAAGATTTTATTCACGTTTAAACCAATATAGGAGTTTGTGGGTGCTTGTATTTTTTGATTTACCAACAGAGACCAGAAAAGAACGGAAGATCGCTACCTCCTTTCGCAAAAAGCTATTGGACGACGGTTTTGCTATGTTTCAATTCTCCATTTATATGAGGTTTTGTGCCAGTAGGGAAAATGCCGAAGTCCACGTAAAGCGGATACGTAAGAATCTTCCCAAGAAAGGCAAGGTGGGGATTATGCAAATAACAGACAGGCAATTTGGATTGATGGAGGTATTCCATGGAACAAAATTAGCAGAAAAGGAACAGCCTGTCCAGCAGTTAGAATTATTTTGAAATCCAAAATTTAAGAAAGTTTGAAATTCCAGATCAAAAAATCAATTAATTTTCATTTCTGATTTTAGTGATAAATCACAGCATACCAGATGGTTATCTAGGGGTAT # Right flank : CTATCAAATTGAGATTTTCCACTGTGAAATTTATAGAAACATGCATTTAAGATGCTTATTCCACACTCCTTTAAAGAAATATATTATCAGTAAGGTCTAAATAGGTTCTATCCTAAAAAAAATCTAAGACTCCTGGCAAGATCAGATAGGGCATCAGAAATGGTATTTGTATCCTATTAAAATATTATGTAGCCCATTTAAAACCAATTTCTTCTCTTAATAACCGGACTTTTTTTTAATCGTTGATTAACTGCTGGGTAGGATTTCATGGCAGTACATCAATTTTGAAAAGTAAGTTATCTTATGTATTTTGACTATAAGTATTAAGTTCTTTCCAAAAAGATCATTCTGATTCAACTGAGTCCAATAGAATTACCAGATTTGGAGGTGATTAATATTGAAGTGGGATACGGGCTAGGTTGGTTGGAAGTCTCCTGCAAATCGGTTAAGGATAGGTATCGAATCAATTATTTACTGTGGAGTTTAATGGAGTTGAAAAA # Questionable array : NO Score: 3.05 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.86, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTGATATCCTTAGTAAGGTACAATTTTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //