Array 1 30122-31661 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSVW01000007.1 Ligilactobacillus salivarius strain FCQHC8_L1 Scaffold7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 30122 36 100.0 30 .................................... CGCTCAAGGAGTTATCGTTAAAGCCACTCA 30188 36 100.0 30 .................................... AGTCTCAGCTAGAGAGCTACATGAAACATT 30254 36 100.0 30 .................................... AATGACAACTCTAATTGTTGGGGAGGGTTA 30320 36 100.0 30 .................................... TAAGCTAACTGAATATTATGAACGAACTAT 30386 36 100.0 30 .................................... GATTAACTTCTGGTAAATTATAAGGATTAT 30452 36 97.2 30 .................C.................. AAGCAGTAACAACTAGTTTACAAGTAGCAA 30518 36 100.0 30 .................................... AAACCCATTGCCAAAAGTGAAAAGCCATCG 30584 36 100.0 30 .................................... AAGCAGTAACAACTAGTTTACAAGTAGCAA 30650 36 100.0 30 .................................... TTACTGAAATGGTTAGTGAAGGCATTAAGT 30716 36 100.0 30 .................................... ATTATTTCCAGTTACTCTTTCTTTAAACAC 30782 36 100.0 30 .................................... GGCTCAAAAAGTTATCTGGGGTGCGTTCTT 30848 36 100.0 30 .................................... TAGCCGGGCAGTATAAACAAGCATTTTTCC 30914 36 100.0 30 .................................... GTAAGTCTAATAACGAACTAAACGCAACTT 30980 36 100.0 30 .................................... CAATCATAGATTTTATAAAAACATTGTTAA 31046 36 100.0 30 .................................... TAGACTTTTGATAACCATTCTCGACCATGA 31112 36 100.0 30 .................................... AAACACTCCAAGTGTTCAAGCAGCTAGAGG 31178 36 100.0 30 .................................... GAACCATTTACTTCATACGTGATGTTGGCG 31244 36 100.0 30 .................................... TTGCTGTCTTACACCTATGTCAATTCAACT 31310 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 31376 36 86.1 29 ..........T.........T...A......G.T.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC C [31409] 31442 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 31560 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 31626 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 23 36 97.5 32 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : TAACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAAC # Right flank : CTAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATGAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAACTAGGGAGGGGGAATAATAATGAAC # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.15, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [75.0-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //