Array 1 62455-61495 **** Predicted by CRISPRDetect 2.4 *** >NC_011992.1 Acidovorax ebreus TPSY, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 62454 36 100.0 30 .................................... TCTCGCTCATGCTGTTGTCCCTCCGTCCAG 62388 36 100.0 30 .................................... AGCGATGGCCTCTTCGCGCCGGGCGTAGCC 62322 36 100.0 30 .................................... GGACGCCCAAAAGGCCGCTGGGAACGTGTT 62256 36 100.0 30 .................................... TAACGTCGTTCGCATTACCCACGGCGATCC 62190 36 100.0 30 .................................... GCCGCCGTCGCAGGCCATCCAAGTGGTTAT 62124 36 100.0 30 .................................... CTGGCTTCCGCGCAGTAGACGAACTGCTCA 62058 36 100.0 30 .................................... GCTAGAAAAGGCAGGGGTGACTTACATCGA 61992 36 100.0 30 .................................... AATGCGAAATTACGAGCCACGGGGGGAATG 61926 36 100.0 30 .................................... GAGGAAGCCTCTGCAAAGGCTCAGGCTGAT 61860 36 100.0 30 .................................... TGTCGCGCGTAGCTTGCCGGACCTGCTTTC 61794 36 100.0 30 .................................... TGTCGCGCGTAGCTTGCCGGACCTGCTTTC 61728 36 100.0 30 .................................... ATGCAGCATATGCCCTGCGCTGCATAGCTG 61662 36 100.0 30 .................................... AAATTTAATCGCCTCCCCCAAACCCTGCCG 61596 36 100.0 30 .................................... GAATATCGCTCAGTGGGCCGATATGGGCGT 61530 36 94.4 0 ................................TG.. | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 99.6 30 AGTGTAGCTATCCGGGGTGAGAGAGGGAGCTACAAC # Left flank : GTCGCTGGCGCGCTTGTACGACGGTGGCAGCGAGCAGGTGCTGGAGTTGCCGCGCCTGATCGGCCTGCGGCAGCATGTGTTCGAGATATAGCGGCACCTCACCATGGGCCAGGACACGAGGCGATTTATGCGCATGTTGGTGTTCTTCGATCTGCCCGTAGTCAGCAAGGCCGACCGACGCGCCTACACGGTGTTCCGCCGATTCCTGCTCAACGACGGCTACGACATGATTCAGTTTTCGGTCTATGGCCGCATCCTCAACGGCACCGATGCTGCGCAAAAGCACATGCAACGCCTATTGGCCAACCTGCCATCCGAGGGTTCGGTGCGCGTGCTCACGGTGACCGAAAAGCAATTTGCCAGCATGAAATTGCTAGTCGGGTTGCCATTATTTCAAGAAAAAAAGGTCAACGCGGCACAAATAGCACTGTTTTGAAAAGCATTTTTGATGAACGAAAACCCACGCTCCGCTAAGCGGGGCGCGGGTTTCGCTAAGACCA # Right flank : CGTATTCAAGCGGGATAAACCCGCCTGAATACGGTCAGCGCTTCGCGCACGTCGATCAAGAAGAAAGCAGCGCAGTGACCACAACGAACTCTGCCTTGAGCAGCCAGTCTCTGTCGCGCCACCATCAGCAACCGTTGACTGCTTCCTATTTGGCCGCATCGTCGATGCCCCACCCGCACGCAGCTGCGCTTGTGCTTTACCGCGAGGCTTGCTCCCGCTGGTGTACGGCCACGCAAGGCGCACGCCCTGCGGGACTCTGGCGTAACGACTCAGCCCCCGAACAGCTTGTTGGCCGTCTCGGCCACCAGACGGCCCTGGAAGCGTGCGCCGTCCAGCTCGGTCGCGCTGGGCTGGCGCTGGCCCTGGCCGCCGGCGATGGTGGTCGCACCGTAGGGGGCGCCGCCCACCACTTCGTCCAGCGTCATCTGGCCCTGGAAGCTGTAGGGCAGCCCCACGATCACCATGCCGAAGTGCAGCAGGTTGGTGATGATGGAAAACAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTGTAGCTATCCGGGGTGAGAGAGGGAGCTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.00,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //