Array 1 813-1176 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZDR01000026.1 Companilactobacillus farciminis KCTC 3681 = DSM 20184 Scaffold26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 813 36 100.0 30 .................................... TATTTAACACTCACAACAGTAACCCAAGTA 879 36 100.0 30 .................................... TAGCCGAAATTACCGCTTGGTTGAAAGCTC 945 36 100.0 30 .................................... ATATTTGATGCGTATTCAACGTTTAGTTGA 1011 36 100.0 30 .................................... TACCTGCGAACATTAGTCTAGTGCCCCCCC 1077 36 100.0 27 .................................... AATAATTATTTCTAAAAGTATCAAGTA 1140 35 86.1 0 ...........CA........C.-...C........ | CT [1149] ========== ====== ====== ====== ==================================== ============================== ================== 6 36 97.7 30 GTTTTTGTACCTTAAAGAATCTAGAAATAGTAAAAC # Left flank : AATTTCGTTTGGAAAATACCGGTTTACCAGTTTGGTTGATACTTTATAACTTAGATAGTTTTATCGCTCCAAGAGATATCGACTATTTATTGATTAAAGTTAAGGAGCTAATGAAAGAGTATGATTTGAAATTAATTTATTTGGGTAATAGTTTGAATAATATTCCACTAGATTCAAGTGAAATTGATGGTGTAGTGTTAGCGGCTGATGAATTTAACCAGTTACTGCCAATCGATGAATTGATGGAATCTATCAAGCTGCATTATCCTAATAACTTTAATATGTCCGAGAATGAGATTACTGATTCATTAAAAAGAATTATTCCGTTTATAGGAATTAAGGAAAAAGTGTTCATATCTAATAAAGATTTGGTATTATTAAAGGTAGTGAACGATATTTTAGGATATGAGACGTCGTATGATCTAAAATCTCAATCACTAACGGGTGCAGAAACCAAATTTTTGGAAGATTAATTGACGAATTAAGATTTTGAATTTGAG # Right flank : CCCAAAGAAGACTAGATCATGGTGGAATCTAGTCTTTTTATTTTTGCAAAAGTGTCATTAAATTTAATAATATTACATTTTTTCTAATTAATTTTAACTTTAACCATAAATACCTATTGCCCAAATTAATATTCTCGTTTATGATAGTCTCAAAACTTTCCAAGGAAGAGGGATCACTATGAAGGCAATTTTGACAGTAATTGGTCATGATCACGTTGGTATCGTGGCTAAAGTTTCAACTAAGTTGGCTGAATTGAACGTTAATATTATTGATATTTCGCAAACTTTGATGCACGAGAATTTTACAATGATGATGATGGTAACGCTCGATAACTCAACTCAATTTGACACGGTACAACAAGAGTTAGCTGGTCTTGGTCAAGAAACCGGTTTGGATATTCGCATTCAACGTCAAGAAATTTTCGATGCGATTCAAAAACTTTAGGGGGATCAATGATGGAAACTAATTCGATTTTAGAAACAATCCAGATGGTCTCTGA # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACCTTAAAGAATCTAGAAATAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 37968-37145 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZDR01000015.1 Companilactobacillus farciminis KCTC 3681 = DSM 20184 Scaffold15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================== ================== 37967 37 97.3 29 ....................................G CGAGCAGCCTTTTCGAATTCATAAAGTTA 37901 37 100.0 29 ..................................... ACTGATTGCTTGGCTTTCTCATCGGTTGC 37835 37 100.0 29 ..................................... GGAATACCATACAAATTGGCGTAATAGCG 37769 37 100.0 29 ..................................... TGTGTATCATCAACCAAACCAATTGCTAA 37703 37 100.0 29 ..................................... CGTCAAGGTCAAGTTCCTTCTTGATATCC 37637 37 97.3 23 ..............C...................... AGTGGAATCATTTCTTCAATTCC Deletion [37578] 37577 37 89.2 29 T.C.A.N.............................. TGTGTATCATCAACCAAACCAATTGCTAA 37511 37 100.0 29 ..................................... CGTCAAGGTCAAGTTCCTTCTTGATATCC 37445 37 97.3 29 ..............C...................... AGTGGAATCATTTCTTCAATTCCTTCTAA 37379 37 97.3 30 .....................T............... TATCCTGAATTGCTTTGAAAATACTTATCC 37312 37 97.3 29 .....................T............... AATAATTACACCGGCATGCGTGAATCCGT 37246 37 83.8 29 ...........T......C..T.......G.T..T.. AGCTACAGTAAGGACAAAGATACAGTTAA 37180 36 81.1 0 ...C........C.C..........T-.C......T. | ========== ====== ====== ====== ===================================== ============================== ================== 13 37 95.4 29 GTTTTAGAAGTATGTCTTTCTATTTACTTAAGAACCT # Left flank : AATCTCAGTTCATTCAATCTCAATGCAAGTAGTCAAATGAGAATTATTTTAAAAAAGATAATCGAGGATTCACAAATAATGCTTAACGAAATTGAAAAAGTTAATGCCGATTTAAATAGCGTCGTTTTTGACTCCATTACTAGATATTCATTGCCCTTAACCCTTGATATGTATGCCAATTACGAGAAACTACTAAAATCAAAGGACATCAAAATAGATTTTAGTAGTTGGGCTAATTACTGTGATAAAATTATGGATGTAATCAGTTTTTATTCTGATTTCACTAATAAAAAAATGCTTATTTTTAACAACATTGGTCGCCTATTGAACGTTAATCAGTTAAATGAGATACATGCTTATCTAAAATCCGTTGATTTAAAGCTAGTTTCTTTAGAATCTTACCCTATGATTTTTAAGGAGGAAAAACTAAATGCTAAAGTCTATTCAATCGATAATGATCATGTTAGGTTTGATTATTAGAAGTTGATTAGAAAACAACG # Right flank : GCTATACTTATCCTTGTTAAGAGATTCAAATCAATAAATCATTTTTAGTATGCTTACAAGTACGTCATCTCAATTACTTGCCTTAGAAGTAAATCATCTCAAACAAAAAGCTCTAGTACAGAATCCCAAAAGATTCCAATACTAGAGCTTTTCATTTTTTTATTTCAAACTCTTCATAACATAATCACCCAAAGTCCGGACACGTTTCAAATCGTCTTCGTCTGGATCTTGATCAATCTTCACGGAGTCAGCGACTTGTTCGCCGTTACTGGAATTCAGTCGCATCGTGAAATAATCTACCGCACGACCAAAGTGAATGTGTCCTTTGGAGCTTGATCCTAACACGGTAAACTTAGTTCTTTCCAAGTCAACATCGGCCAAATCTTCATAAAAATCTTGAGCTTCTTCTGGTACTTCGCCGTCATTATAAGTGTATGTGTCAACAATTACAGCATCGTATTCAGAAAGTTCATAAGCATCGGTATCGATTATTTGTTCTA # Questionable array : NO Score: 2.60 # Score Detail : 1:0, 2:0, 3:0, 4:0.77, 5:0, 6:0.25, 7:-0.04, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTATGTCTTTCTATTTACTTAAGAACCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.40,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //