Array 1 97523-96396 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHDAY010000019.1 Raoultella ornithinolytica strain LAM1 NODE_19_length_98325_cov_103.009, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     97522	    29	  96.6	    32	............................A	CACGGAAAACGATTATTTCGTCCTGAATGATC	
     97461	    29	 100.0	    32	.............................	TGTTAAACGCTTATTCACATTGCACCCCCGAT	
     97400	    29	 100.0	    32	.............................	GGTTGCAGGTGGTGGCGGTATCCGGCTGTTTT	
     97339	    29	 100.0	    32	.............................	ATAAACAACGGCGTAGGCATACCGGAGTCATC	
     97278	    29	 100.0	    32	.............................	TAAGCCCGTCGGGAATTTTTATAGAGAATCGG	
     97217	    29	 100.0	    32	.............................	GGGTATTACATCGATGTACGCACACACGACGT	
     97156	    29	 100.0	    32	.............................	GGTCGGGTGTGACCTTCTTACCGACCAGGTTC	
     97095	    29	 100.0	    32	.............................	CGCGCCCGCCGTCCCTGGTGTGCGTGATGCGG	
     97034	    29	 100.0	    32	.............................	GGGAATTGAAATGCGTACATTAAACATTTTCA	
     96973	    29	 100.0	    32	.............................	TTGGCTGATTATGTGCAGCTGTATAACGACGA	
     96912	    29	 100.0	    32	.............................	AATATCGAAATAGTCGGCTTTATTTGACATGG	
     96851	    29	 100.0	    32	.............................	AAGACGGGGTGGTAGTACCAGGCGTCCGGGGT	
     96790	    29	 100.0	    32	.............................	GCCAGACCAGCCTCGATGATCTGCTGTGGTTC	
     96729	    29	  96.6	    32	............T................	CTATATATTGTCTGGTCATCATCACCGACTAT	
     96668	    29	 100.0	    32	.............................	GTTCGGCAATCGCCCTGGTGCTGCCAGTGGAA	
     96607	    29	 100.0	    32	.............................	CTTTCACGTTTGCTCATAGGGATTTTTTTTCC	
     96546	    29	 100.0	    32	.............................	TGCAGATATTTCCCTGATTTGGGGATCCAAGA	
     96485	    29	  96.6	    32	.............T...............	GTCCGTGTGCGCGGAATATTCCCGGATGCGTC	
     96424	    29	  93.1	     0	A...........T................	|                               	
==========	======	======	======	=============================	================================	==================
        19	    29	  99.1	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   CTTATTGAAGAGGTTCTTGCCGCGGGGGAAATCCAACCTCCAGCTCCCCCTGAAGATTCGCAACCCGTTGCGATCCCACTTCCTGTCTCGTTGGGAGACTCTGGCCATCGGAGTAATTGAGGATGAGTATGCTGGTTGTTGTGACTGAAAATGTACCACCGCGACTGCGAGGAAGGCTGGCTGTCTGGCTACTGGAGATTCGTGCTGGGGTGTATGTTGGCGATATTTCGGCCAAGGTCCGCGAGATGATATGGCTACAAATCTCCGTTTTGGCGCAAGAGGGAAATGTCGTGATGGCATGGGCAACGAATACTGAATCAGGATTTGAATTTCAGACTTTCGGTGAAAACCGACGTATTCCGGTAGATCTGGATGGGCTGAGACTGGTGTCATTTTTACCCATTAAAATTCAATAAGTTAGTGTTCTTTAAAAATACGGAAAGTTTGGTAGGATTGAGTGTGTTGAAAAAAGTCTTTTAGTTCAGTTGCATAGCGTTAGA
# Right flank :  CAGCGCTGTATTACTGCCTGGTAACGCAGGGATGTGCACCTTCCCCGTAACAGAAAACGCCGGCTAGCCGCGCTTTTCCGCCTTTGCCAGCTCTTTTATCAGCGGCAGCATCACCTTGACGACATCGCGGCTGCGGTGTTCGATACGACCCGGCAGAGCCTTATCAATATGCTGCTGGTTATCCAGCTGTACGTCATGCCAGCTGGTTCCTCGCGGGAAGGAGGCGGATTTGTTGCGCTGTTGATAGCCATCTTTCTTACCCAGAGACCAGTTCGTGGCCTCCACGGACAGGACCGGGATCCCCGCGCTATCAAAAATGCTGGCGTCATTACAGCAGCCGGTACCCTGCGGATAATCATGATTGAGGCCAGGGTTGGTATAGGCGGTAATCCCTTTGCTGCGCGCAATAGCCAGCGCGCGGTCTCGGGTGAGTTTGCGAATCGAGGCGGGAGTGCTGCGCCCGCTATTAAAATAGAGCTTATCGCCAACCACCAGATTAT

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [4-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [45.0-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//