Array 1 17967-18911 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMGD010000004.1 Leminorella grimontii isolate MGYG-HGUT-02305, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 17967 29 100.0 32 ............................. TAACGCGATACAGCAGAGATCGAGCCAAACGC 18028 29 100.0 32 ............................. TCAGCCACCCAGGCATAAGCATCTTCGCCTGG 18089 29 100.0 32 ............................. TAGATCCGGGTTGATAATGCTTCAGTGCTGGA 18150 29 100.0 32 ............................. GGATGCAATGGATTGCAGAACGCTACGCCTCT 18211 29 100.0 32 ............................. GACTGATAACCACTCTACAGAAGCGTAGAAAT 18272 29 100.0 32 ............................. AAACCGGGTATACTAAGTTCACGTTCATGCGC 18333 29 100.0 32 ............................. TGTTCACATCAGTAACGCTGTGTTTCGCGGTA 18394 29 100.0 32 ............................. CTGAACGTCGAAGCCGGCCTCTGTGGCCGCAT 18455 29 100.0 32 ............................. AATGTATATATATTATTTATAGGCAGAAGTCA 18516 29 100.0 32 ............................. CCAGGATCATGCGACAATTCCAGCGCAGTTGC 18577 29 100.0 32 ............................. GGCAAAAAGCCGGTGAAGATGTTCCGCCGCCT 18638 29 100.0 32 ............................. TCCGTTAACGATCAAGACCCGGTGATGTCAAT 18699 29 100.0 32 ............................. GTCACGCGGTAGCCGCGATCGGCGGTCCATAA 18760 29 93.1 32 ............TT............... CGGCCTTCCGCTTTCCAATAGGGATATTATAC 18821 29 96.6 33 .............T............... GCAGAACGTCGCGAATTGATGCGTCGGCATGGC 18883 29 82.8 0 ............T............TAAA | ========== ====== ====== ====== ============================= ================================= ================== 16 29 98.3 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GGGCCTCTACCAAAGGGCGCGCCGGGGCGAAATCCCTCAGTTTACCGGCATCGATCTGCCGTACGAACCGCCGCTAGAGCCAGCTGTGCGTCTCGACGGCCAAAGGCCGGTGGAAGAACTGGTGGCGCAGCTGGTGGCTGCGCTGCGGGAGCGGGGGATTGTTGGAGCGAATAGGTAAGAAAGTAGAAAGCAGGCTGACGCGCAGCGGCTTTTGTCAGCATGTTGGCAGTAAGCGGAGAGGATGAACCGCTGCTGTCGGACTGAGTGCCAGCAGTTATCTCACTATTTATTTGATTATTAATGATAAAGATGAAATTTTTCCACCGGAATGTTTGACCCTATGGCTAAAATAAAACCGTTCCGGTAGATTAAGGGAGAACGTTAGGCGTGATATTTTTTTCTATAGTGATTAATGGGTTAGCGTTCTTTAAAAATAGGGATATGCTGGTGGACTTTATTGGTGGATAAAACATTTTTAAAATCAATTGGATAGTTTTAGA # Right flank : ACCCCAAATTATTTTTCTGACTCAATACCGCGCCGATCCAGCTCTCTGCGTAGTAACCGTTTAATCCAGCCAGCCTTATTGTCATCGCCATCTTCTTTCATGGCGATAGTCAGCCTTTCCGATAAATCAGCATCTAGGCGAAGTTGCACGACGTATCGCTCTTTTTGATGTTCGTTGGTTGACATTGGTTATCACTCATGTATATTTTGTTTGCTGGTTTTAAATGTACATCAATGTATAGCAATCAGTAAAGCAACGCCTCGGAGTGCTGGAACACATCCGAGGCGTCTAACCACAACATTAATAGGAGTAATGCTATGGCTACCGCCAATGGTATCACGCACGCACATCCAAATCTCTACACTTTCCTGAACGTCCGTTCCAACTGCCCGCTCTGTGAAATTCAGCAGCTGATTTCCATATCGGCCACAACGGAGGCCGAAGCTCGTCGCCTGTTGGCCAGTCTCCCTCTGGTGTCCGTCTCCTGTAAACCGCAGGAG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //