Array 1 563855-565044 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LPPU01000034.1 Klebsiella aerogenes strain SMART_543 contig4, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
    563855	    29	 100.0	    32	.............................	TTGTACCCGGATACCAAGGTTGCGTTTCACGT 	
    563916	    29	  96.6	    32	............................C	GTCTCGGCAATACGCGGGCGCATTTTATTGTC 	
    563977	    29	 100.0	    32	.............................	TCGAGGGGGTCTTCATACTCACCGGCGGACGA 	
    564038	    29	 100.0	    32	.............................	CCGATGCATCAGCAGTGCAGGACCTGCAGTCG 	
    564099	    29	 100.0	    32	.............................	CTTGAGGCGATGGGGATAAAAACCGTCCTGCA 	
    564160	    29	 100.0	    32	.............................	AGCATCAGGGCGATATCCCAATCGGGCGCGGG 	
    564221	    29	 100.0	    33	.............................	AATCCATAAATAGCTATTAATTAGCCTGCTAAT	
    564283	    29	 100.0	    32	.............................	CAATACACCGGCGCTGGCATGACGCGCATGGT 	
    564344	    29	 100.0	    32	.............................	CTACTTTCTGAAAGATAGAAGCTGATTTATAA 	
    564405	    29	 100.0	    32	.............................	CCTCAGAACGAATCCTTGCTTAGCTCTGGCTG 	
    564466	    29	 100.0	    32	.............................	GTCTTTAGAAAAATAATCCAGTAACATTTCGC 	
    564527	    29	 100.0	    32	.............................	AACGCGCAGGAGATGGTTAAATTTATCAGCTC 	
    564588	    29	 100.0	    32	.............................	GTAACAACCAGGGGGCAGGTTCAGCAGGTCCC 	
    564649	    29	 100.0	    32	.............................	GCGACGCTCCGCACCGTGCCTTATATGACTGT 	
    564710	    29	 100.0	    33	.............................	CTAATAAACGACTCGCTGAACAGAATACCCGCC	
    564772	    29	 100.0	    32	.............................	TTCAGGCCAACGCCAGCCAGATTGCCGGGGTG 	
    564833	    29	  96.6	    32	.............T...............	TGTGGCTGTATTGTCGAAATCGACCGGGAACC 	
    564894	    29	  93.1	    32	G............T...............	AACGCATAGGAATCAGCAAAAGGAGTCTTGCA 	
    564955	    29	  93.1	    32	G............T...............	GGCACATCGGGTAAACAAACGTTTTCTGGTAT 	
    565016	    29	  82.8	     0	G........C.AT.C..............	|                                	
==========	======	======	======	=============================	=================================	==================
        20	    29	  98.1	    32	ATGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   GTTCTTGCTGCAGGCGAAATTCTGCCTCCTCTGCCCCCTGAAGATGCACAACCTGTTGCGATCCCACTTCCCGTCTCTTTGGGAGATATCGGCCATCGGAGCAACTGATAATGAGCATGTTGGTTGTTGTGACAGAAAACGTACCTCCTCGTCTGCGGGGGCGGCTTGCCATCTGGTTGCTGGAGGTTCGTGCTGGAGTCTACGTTGGCGATACTTCAAAGCGGATCCGGGAAATGATTTGGCAACAGGTGATACAGCTCAGTGATGGCGGAAATGTCGTGATGGCTTGGGCGACGAATAGTGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAGAACCGCCGTATGCCGGTAGATTTGGATGGCTTGCGACTGGTTTCATTTCTTCCCATTGAAAATCAGTGAGTTGCATGTTCTTTAATAATATGAAATTGTTGGAATAAAGTTGGTAGATTGTCGTTGTCTTAAAAAATCATTATAAAACAGTAGTATATGTTTAGT
# Right flank :  GTCTGCAACCGAGTCTAAGGTAAAATCAGCACCGTATTCCCGCTCTTACCGTTGCAACCCTACAAAATATATCTTTGCCAACAATTTCATTCTCTATTTAACTTATGTATCTAATAAAAATTCATATAGCCTATGAAAATTATTCGCTTAATGAATGATTAAATCTAATTAATAATATTAAACGGCATTGTAAAAAATGCTTGTTATTTTTATTTCTATCCATTTAATATGTCGAGGTTGCATTGATTACTGATTTACTAATTCTTGCTCGGTATTATATGCAATATGAATGGAATCTGGTTTGTTATTTATAATGGATGAGGGGAATCTCAGTGAAATAATATAAAGCTGTTATTTATCAGTAGGGTATGCTGGGTAGCCTGTTGTTTGGCGCATCTAAAGTTGATCCGGTAAAATTCTCTGACTTCCTGAACAAGAATGCGAAGAGGGCTGGCGCGTCGTGACCATGGAAAAGGACATCCGCCGCATGATGCTCTTTT

# Questionable array : NO	 Score: 6.16
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [6,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched ATGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [75.0-50.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//