Array 1 3706897-3708010 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ195572.1 Streptomyces sp. CS057 scaffold00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3706897 29 100.0 32 ............................. GGCTGTGGCCGCCCCGTCTGCGGCCCGGACAA 3706958 29 100.0 32 ............................. CCGCCCCGGGAGGAGCTGCTCGCCGTCGGCGA 3707019 29 100.0 32 ............................. ACCCCCACGCTCATGACATGACACGGAGTGGC 3707080 29 96.6 32 ......G...................... ACCCCCACGCTCATGACATGACACGGAGTGGC 3707141 29 96.6 32 ......G...................... GCGGCCCAGGGGGAGATACAGGAGGCGGCCCA 3707202 29 93.1 32 ..............C.T............ GGCATCGAGACCCTGCGGACCCAGCTCGACAT 3707263 29 100.0 32 ............................. GTACTGGACGCAAGGGAGATCCCTTGGCCTTT 3707324 29 100.0 29 ............................. GTGTCGCCGTCGTCGTCGCCGTCCTCCTG 3707382 29 100.0 33 ............................. CCGTTGGCGCCGCAGCCGATCGCCTGGCAGTCG 3707444 29 100.0 32 ............................. CGTCCCGTACGGGAGGTCAACGGGCTGTACCT 3707505 29 100.0 32 ............................. TCGTCGCCTCCGAGGCGGCCGACCGCGGCGCG C [3707510] 3707567 29 100.0 32 ............................. CCCACCGACGTCTCCGCGTACTCGAACGGATT 3707628 29 100.0 32 ............................. TGGTCGAACCTGCCGGTGCAGGCAGGCGGCAC 3707689 29 89.7 19 ........................A..AA TGAGAGCCCGGGGACCTTC Deletion [3707737] 3707737 29 100.0 32 ............................. ACCCACTGGACCGCGGACTCGTACCTGCGGGA 3707798 29 100.0 32 ............................. CTCACCGTCGGGAAGGTCGACGCCGTCGCGTG 3707859 29 100.0 33 ............................. AGGGGTCAGGTGCAGCTCGCCGGCCGGTTCAGC 3707921 29 93.1 32 .C..........................T GTCGTCAACTCGATCAACCTCTTCGGAATCGT 3707982 29 86.2 0 .....................GC.GC... | ========== ====== ====== ====== ============================= ================================= ================== 19 29 97.6 31 GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Left flank : TGCCCACCGCCGGAAGCCCCCCGCCCGACGCACCGACCCCCACCCACCACCTCCTCGTGGAATGCACCGACTGCGGCCGCCCCGGACCCCCGCAAGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCGAAGCCCACTCCGGCTCCGTGGACAGAGAGAACTCGCCCCACCCCACCGACATCGCCGACGTCAAAGCACACATGAACAACCTCCGGGGCCTGCTCAAGCCCGTCTAAGTGCGACAGTGCGGCACACCTGACGGCACCGGCACACAGAAGCCATGAGCGAGCTGCACCCAGCGAAACGAACGCCCCTCGGTACGGGACGATCACGACCCTTGCTTTCAGGACGCCGCCTCTGGCAGCCCGGAAAGGGCAGAATGAATCCCGACGTTTAGAGCGACGAGCAGAACCGCTCACAACCCAGGGGGCGATATGTCCTTTTCTCTGAAGCTTGCCGAAAAGCACCACTCGCCTGCATAGAACCGCAGGTCACGAACT # Right flank : CCTCCGGTCGTCCGAAATCGCCGGCATCTACAACATCTCCACCCTGGCCGCCCACCGCCGGCGCGGCTACGGCGGTGCCATCACGCTCGCGGCCCTCCGCACGGCCCGCGAGTGAGACCACCGCATCGCGGTCCTGCAGGCATCGGGTGACGGTGAGCCCGTCTACCGCCGCCTGGGGTTCCGCTCTTGCGGCCAGTTCACCGAACATGCCGTCAACCCCTGAACTGCCAAGGCTCCACGGACCGTCCGTCCGCCATTCCTGAATGGGCCGGTCACAGCCACTCATTGATGGCCGCTACGAGGACAGTGGCCCTTCCCAGCCTGTGATCGCGGGGCTCGGTGAACACACCGTCCGGCGACTCCTTCCGCAGGTCACCCCGTTTGCGTGCCCCGGGCCTCGGTCCTAGTTACCTCGTTGTGTGTACGCCCCTTGCGGCCGATCATGGGCGTCGGAACCAGCAAGGAGGAACAGGATGGGGCTCATGCTCTCCCCCGGCGAC # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 4549480-4549024 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ195572.1 Streptomyces sp. CS057 scaffold00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4549479 29 100.0 32 ............................. TGCCCCTCCCCCTGCGGCGGTTGGTGCCCTCC 4549418 28 96.6 32 .....................-....... GAGCGGCGTATCCGGCGGGCTCGCCGACGGGT 4549358 29 100.0 32 ............................. TGGCGGGCGTCGGGGGCGATCTCCGGGCCACA 4549297 29 100.0 32 ............................. AGGAGAATCGCCCGTGCGCACATACTCACGGG 4549236 29 100.0 32 ............................. CATCTGACTTGGCTCCGTGACTTACTTTGAAG 4549175 29 100.0 32 ............................. TACGAGATGCTTCTGCCGCTGGGCCTGCTCCT 4549114 29 82.8 32 .....................G..AC.GT CAGCTCGCAGAGCCCTCGAACGGGTGACAGAC 4549053 29 69.0 0 .....T.....AG.CC..C.....CG.G. | T [4549033] ========== ====== ====== ====== ============================= ================================ ================== 8 29 93.5 32 GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Left flank : TGGTGACCGTCATCGTCCTCACCAACTGCCCGGTCGGCCTCAGAGGCTTCCTCACCCGCTGGCTGCTGGAAATCTCCCCGGGCGTCTTCCTAGGCTCTCCGTCCACCCGCATGCGCGACCTCCTGTGGGCCGAAGTCCGCGAGTACGCCGGCCAGGGCCGCGCGCTGCTCGCCTACCAGACGGACAACGAGCAGGGCTACGCCTTCGAAACCCACGACCACACCTGGCACCCGACCGACCACGAGGGCCTCACCCTGATCCACCGCCCGAGCATCCACGCCCGGCGGGCGGGCAGTCCGGAGAGCGCGGTGACCGACGTTCCCCAACAGGGCTGGAGCAAGGCGTCGAAACGACGGAGGTTCGGGGGCGGAAGGTAGGCGCGGCTTCGAGAGCTGGGTCAGGTCGGCGTGCACCACTGGACAGGAGAGCCCTTTATGTTCGATTTCAAGGAAGTGGGTAAGAACAGGCTCCTGACCGCGTAGAACACCAGGTCAATGACT # Right flank : CACCACGGCGGGATGCGTCACAGACCTGTCTCGGACCTTGACGGAAGCAGGATGTAATGACCAGTGCGCCGGACTACAGCCAAGGCATCGACACCGAGCGCGCCCTTAAGTTCGCTGTGCAGCGCATTCGCGGGGACCGTGTCCAGATCGTTGAGGGGATCATCGAACCGGTGTCACCGACGTGGGACCACGAGCGCGCTGCCAAGCTCGTACGCCGCCAGATCGAGAGGCGAGTCGACGAGCTCGGGTGCGTGGAAGGGTCCGGGAATCTGGACCTGCCCGGGTCCTCGAACTGGTATGTCCCGGACATCGCCGTTGTGCCGGAGGATCTGGCCAAAGGAGGCAGCGCCCTGCTTCCCGACCAGACGCTGCTGATCGTAGAAGTGACATCCGAGTCGAACGCGGAGACGGACCGGGTCGTCAAGCGACGTAGGTACGCCGAGTACGGGGCGCCCCTGTACCTGCTCGTCGACCGCATCGATCGCAGCATCACGCTCTTC # Questionable array : NO Score: 5.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 4560849-4559600 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ195572.1 Streptomyces sp. CS057 scaffold00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4560848 29 100.0 32 ............................. GTCCACTCGGGCCGGATGCCCAGGTCCGCGAC 4560787 29 100.0 32 ............................. GTTCGGCGCTTCGACTGAGAGCCGCTGAACTG 4560726 29 100.0 32 ............................. TCAGGCTCGGATCGGTCATCGGCCGGCGCCCT 4560665 29 100.0 32 ............................. CCCCTTCGTGCTTCCCCTGTTTTTGATCATGA 4560604 29 96.6 32 ............................T CCTGGCCATACGGGTCTCCAGACGTGACAAAG 4560543 29 100.0 32 ............................. GCGTGCGCGTGCCCCAACTGGGCACCGCTGCC 4560482 29 100.0 32 ............................. TGCAGCGTCAGGTCATCGCCGATCTCGGCGAC 4560421 29 96.6 32 ............................A CGCAAGTCATCCCGGATCTACTACTGCGACAC 4560360 29 100.0 32 ............................. GCAGGACTTCGCGAGGGGATCAAGGGTGAGCG 4560299 29 100.0 32 ............................. GGCGGGACATCGCAGCGGGGAGCGGCCGGTAG 4560238 29 100.0 32 ............................. CGACAGCGGGGCCGGGCAGGGTGATCCTGTCC 4560177 29 100.0 32 ............................. GTCCGACCGGTCGCAGGCGGCGGTCCTGGACG 4560116 29 100.0 32 ............................. CCGAGCCCGCCGGTCGTCGCGGTCGCGACGAT 4560055 29 100.0 32 ............................. CTGCCCGTCTCCTACGTCCACCCCAGCACCGT 4559994 29 100.0 32 ............................. CAGCCAGCCTGCTCCTGGAGCAGACTGTTGAT 4559933 29 100.0 32 ............................. GCCACCATCCGGACCCTGGCCGGCCTCGTCGG 4559872 29 100.0 32 ............................. CGGCGGGCCGCCCAGCAGGTGAAGCAGGCCCA 4559811 29 100.0 32 ............................. CAAAGCTCCCCGAGTACGTCCCGTGGAAGTCG 4559750 29 100.0 32 ............................. AGCGTCAGGCAGTCCCCGCCGCACCCGGACCC 4559689 29 100.0 32 ............................. TCGCCCGAGGATCAAGGCCGCAGGGCCGTGCG 4559628 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.7 32 GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Left flank : GGCTCCATGGACAGAGAGAACTCGCCCCACCCCGCCGACATCGCCGACGTCAAGGCACACATGAGCAACCTCCGGGGCCTGCTCAAACCCGTCTGAGTGCGACAGTGCGGCACACGTCACGGCTCCGGCATACAGAAGCCATGAGCGAGCTGCACCCACCGAAACGAACGCCCCGCAGTACGGGACGATCACGCCCCTTGCCTTCAGAACGCCACCTCTGGCAGCCCGCAAAGGGCAGAATGAATCCCGACGTTTAGAGCGACGAGCAGAACCGCTCACAACCCAGGGGCGATATGTCCTATTCTCTGAAGCTTGCCGAAAAGCACCACGCGCCTGCATAGAACCGCAGGTCACGAACTGTGGTCCCCGCGCGTGCGGGGTTGTTCCCACCGGAACCACCGCGCTGGCCATGGTGCCGTAGTGGTCCCCGCGCGTGCGGGGTTNNNNNNNNNNNNNNNNNNNNNNNNNGGGGCGCCCTTGCGGACAGCTCCCTTCTCGGT # Right flank : GTCCAGTACGGGCTGGCCGAGCTCCGGCGCGAGTGGTCCCCGCGTGCGGGTGTACCCCTGATCCGAAGGATTGCCGGATTGGTAAACCGGCGTGGTCCCTGCGCCAGCGGGGCACCCCGGAGTCAAGTAGCGCTGCATAGAGCACAGTTGAAGCTCGCGCGAAATGGCACCCGCACTACTACAGCTCCCGCCACGCCCCACACTCCGCGAGTCGACCGGCGGAGCCCGGCAACCAGGGCCACCTCCGGCTCCAGGTTGCACACCAAGCCCCGGCGCACGTCAGCAGATCACTCTCCCCTCGGTCACTCTCGGTCAAATAGGCGCACTTGCGTTCACCTTCGACCATTGCAACCGCCGTATGGCTTCGACGATGTCCAATACGCCCATGAGCCGCGATGATCCGGAAAGCCTGTCGGCTTACGCCCACCTGTCCCCCACCTCCCGCACGGCCTGGGGCAAGCACGACCGGCAGACCGAGCAGTGGCTCCCCCTCTGGCGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [25.0-18.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,4.5 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 4 5268133-5266943 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ195572.1 Streptomyces sp. CS057 scaffold00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 5268132 29 100.0 32 ............................. TCGCGGAGGTCGGCACCGACCTCGCCGGTATC 5268071 29 96.6 32 ......T...................... TCCTGCGCCTTCTTCACCGCGACCTGGAGCCC 5268010 29 100.0 32 ............................. GACGATCCAGCCGGGCTCGAACCCGGTGAGCA 5267949 29 100.0 32 ............................. AACTTCGTGCTCCCGTCCCTCCCGGCCCCCGG 5267888 29 100.0 32 ............................. ACGCAGGACCCGTACACCCGTGTTCGGGGCGT 5267827 29 100.0 32 ............................. GCTCACCGTCATCACGAACGACATCGCCGCCG 5267766 29 96.6 32 ............................A TTGGCCTACTGCTGGTGGCGGTACGGGATCAG 5267705 29 100.0 32 ............................. GCATCGGTGGCCTCCGCGACGGGGGCATCGAC 5267644 29 100.0 33 ............................. GTCCCCGACGGGCGCCGCGGAAACGGGGGCGTC 5267582 29 100.0 32 ............................. ACCGTGCACATTCAGGACGAGGGCGGGGAGTG 5267521 29 100.0 32 ............................. CTCTGGGACCCGTCGGCCGTGCAGGCCGCGGC 5267460 29 100.0 32 ............................. CGCCGTGCCGTAGACGAAGGTCTCGACCCCGG 5267399 29 100.0 32 ............................. TCCGGCAAGGGAACGAAGGCGTTCGACCAGAT 5267338 29 100.0 32 ............................. ACCGAACGAGGGCCTGACCGAGACGCAGCTTC 5267277 29 96.6 33 .............C............... ACGGCCAGGACCGCGGCGACGGCGAGCGACCGC 5267215 29 100.0 32 ............................. TGCGTCGCAGGGTCCCCGACCTCCCGGAACCT 5267154 29 100.0 32 ............................. TGGTCGCTGTGGAAGGGCTGGACCCCTGGTTG 5267093 29 100.0 32 ............................. TGGCCGGCTTCCTCCACCTCTGCCAGCGCACC 5267032 29 100.0 32 ............................. ACCAGGCGGTCTGGGTTGAATGACCGACTCCC 5266971 29 72.4 0 .................AA....AGGAAA | ========== ====== ====== ====== ============================= ================================= ================== 20 29 98.1 32 GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Left flank : CTGCCCACGACCGGAAGCCCCCCGCCCGACGCACCGACCCCCGCCCACCACCTCCTCGTGGAATGCACCGACTGCCGCCGCCCCGGACCCCCGCAAGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCGAAGCCCACTCCGGCTCCATGGACAGAGAGAACTCGCCCCACCCCACCGACATCGCCGACGTCAAGGCACACATGAGCAACCTCCGGGGCCTGCTCAAACCCGTCTGAGTGCGACAGTGCGGCACACGTCACGGCTCCGGCATACAGAAGCCATGAGCGAGCTGCACCCACCGAAACGAACGCCCCGCAGTACGGGACGATCACGCCCCTTGCCTTCAGAACGCCACCTCTGGCAGCCCGCAAAGGGCAGAATGAATCCCGACGTTTAGAGCGACGAGCAGAACCGCTCACAACCCAGGGGCGATATGTCCTATTCTCTGAAGCTTGCCGAAAAGCACCACGCGCCTGCATAGAACCGCAGGTCACGAACT # Right flank : AGGGCCTGCACGTGGCAGGCACCTCGTCGCGCGGCCTACCCAACCGCCCGGCCCAAGCAGCGGCGCGGCCTGGCCATGCGAACCGACAAGCTTGCCATCGCGAATCAGGCCTCAGTCCACCTGACCGCCATCCCTATCTGGGCTCGTCGCTGACCAGGCATGACGACGCGTCACCGAGCGGAGAAACCTGGTGGTCCCTACCCGAAGAGGCCCATAGCATCCGCCTATGACCGAGGACATCAGGATTGCATACGACGATCATGACGCAGAGGCTGAAAGGCAACTCGTCTGGAGGGCCGAGTCCGTCGGCCTCGCAGCGCTCGACATAGACGACGCCGAGCTCATGCACAGCTGGAGATCTGACCCCGTAGCCGCCCACCAAATCGGCATCTGGCCACGCTCACTCACCGCGGTACGCGAGCGCATCGAGCGCGACATCGAGGACGACGATCGCGACGACTTCCTCATCCTCTCTCCCGACAGCGCCCCTGTCGGCTACG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //