Array 1 589850-588729 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNCV010000001.1 Bacteroides eggerthii strain D6t1_180914_F2 NODE_1_length_700509_cov_27.7151, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 589849 47 100.0 30 ............................................... GGAAAGAAATATCCAAAGAAGAACACGAAG 589772 47 100.0 30 ............................................... GAAATCACCAAGTTTTCCGGCACGTTCGTC 589695 47 100.0 29 ............................................... CAAAGTGAACGAACGAAAGTATACACGTT 589619 47 100.0 30 ............................................... TGAATCCTATCCAAGTCCTGTCCGATATCA 589542 47 100.0 30 ............................................... GATGTCAAAGCTGTCCGTAATCTTGATACT 589465 47 100.0 30 ............................................... GCATCGGCAGCTTATTATGCAGCTTCTTAT 589388 47 100.0 30 ............................................... ACAGTCGGAAAGCGGGAAGCAAGCGTCTGT 589311 47 100.0 30 ............................................... GGTTAACCCTAATTGCCTTGACCCTATTTT 589234 47 100.0 29 ............................................... AATCTGCGAAGTAGTTTCCGATAATGGCA 589158 47 100.0 30 ............................................... GGACGCAGCCGTAGGGCCTTGAAAATAAAA 589081 47 100.0 29 ............................................... AATCTGCGAAGTAGTTTCCGATAATGGCA 589005 47 100.0 30 ............................................... TATATCCAATAATACTTCCATGTTTCCCTT 588928 47 97.9 29 ...............C............................... CCTGTACACCATTTTCAATGCTGTTGACC 588852 47 95.7 30 ...............C........T...................... GTCCTCGTGCTGTGGATCGTAGTGCAACTG 588775 47 97.9 0 ....................................T.......... | ========== ====== ====== ====== =============================================== ============================== ================== 15 47 99.4 30 GTTGTTTCCAATGTTTCAAAGATACTAAAATGAGAGCAAATCACAAC # Left flank : AGCATCTCTGTATAAATGTTTCAGTGGTGAATTGCGCAAAATTTCTTATCCGGAGATGTAATGGACCGGTTTAGTGAATATCGTATTATGTGGGTGTTGGTGCTGTTTGATTTGCCTACCGAAACAAAGAAGGATAAAAAGGCGTATGCGGACTTTAAAAAAAATCTGCAAAGGGATGGATTTACCATGTTCCAATTCTCTATATATGTTCGTCATTGTGCAAGTAGTGAGAATGCAGAGGTACATATAAAAAGAGTTAAATCTTTCTTGCCGGAGCATGGAAATGTTGGAATAATGTGCATTACGGATAAACAATTTGGAAATATAGAACTTTTCTATGGCAAAAAGACAGTAGATGTAAATACCCCTGGGCAGCAATTAGAACTGTTCTGAAAAGAAAATCCCGCCATATAGCGGGATTTTCTTCTTGGAAACGACGTCTTTTTTTATTTCTAATATCTTATGTAACTATGTGTATATTAGATTGTTGTTGATAATCT # Right flank : TCTTGGAGGAAAATATCCTTCATATCATAGCTATTTTCAATGTTTCAAAGATTTTTCGATGAGTGGTAACGTAATCCAGTGTATGCAATATTGAATGACACTGGATTGTTATGTTTTCGTAATGATTCATTTGTTTTTCGATGAATTCACTGTCACTACTGCTATTTGTTCCATAGAGGCTTACGGATACCTCTTCATACATATAATCGAGATATTGTTGGGCTTGTGCCATATCTGGATATGTGTTCTTAGTTAGAAATTCTGTATTGGAGGCTGACACTTACTGTGTACAAAGGTACACAGTAAGTATATTGATAAGAGTTTTATTCGTTTTTTCATGTTTATTTTATCTGTGTTTACCAATTATCTGTTCTAAATGGAGCTACAGGAATACCATAGGTACTGAATACACTTGCTTTTGCATAATTTTTGTAAGCGTATCGAACTGCTATCGGATGCTGCACTTTATCGCATGATACGGCAAGGTGGGTTGTTTTGGT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTTCCAATGTTTCAAAGATACTAAAATGAGAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //