Array 1 6566-4767 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJVB01000041.1 Acidomonas methanolica NBRC 104435 sequence041, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6565 29 100.0 32 ............................. GCTCGTGCTGTCATACGTGACCGTCACGCTCG 6504 29 100.0 32 ............................. ATCTGGTGGCCGAATTTATACGCAGCTAATTT 6443 29 100.0 32 ............................. GTCTCGGCACATAACATCGGGGTGGGCGTTCC 6382 29 100.0 32 ............................. GTGACAGCTCCTGTCACAGGCGACGTCACGGG 6321 29 100.0 32 ............................. GAGTGGATGTTCAGCGCGCTCCCTACTGGCTA 6260 29 100.0 32 ............................. ACGGCAGCAGCAGCGGCAGCACAGACGATGGC 6199 29 100.0 32 ............................. CATTTGCACTATCTACCGCGACTGGAGTTATG 6138 29 100.0 32 ............................. CTAGTCACACAGATTTTTCGGATGTTCACACA 6077 29 100.0 32 ............................. GCGCCAGATGGCGGAAAACATAGGCGCACAAA 6016 29 100.0 32 ............................. CCGCATGGCTGTTGAAAAGGGTTTGACAAAAG 5955 29 100.0 32 ............................. GTCTGGCTATCCATCATCTTCACAAATGGGAT 5894 29 100.0 32 ............................. GCCTATCTTGACCTGTATATGCCGGTGATAAA 5833 29 100.0 32 ............................. AATACAACCACCGTATTCAATATACGGCCCAA 5772 29 100.0 32 ............................. GATGACGACGAAATCAGGCTCCTGACATGGGG 5711 29 100.0 32 ............................. GGCAGGGAGCCGACTAAGAACGCGGACAAGGT 5650 29 100.0 32 ............................. CCTTCAGTAAATGCTCCAAAAACAGCCATGGA 5589 29 96.6 32 ............................T GGTCTGTGGTAATGGGCATAATATCTCCATAA 5528 29 100.0 32 ............................. AGGGCGCTTTATACGGCGGCTCTAAAGGCGGG 5467 29 100.0 32 ............................. CGGCTCGGCCCGCGCCACTTTGCCCCGGCTTG 5406 29 100.0 32 ............................. CTCCGGCGCGCATGAGGATCGTGCTGCGTGGC 5345 29 100.0 32 ............................. GGCTCCCTCACGCCGGAAATTATCGGCGGTCC 5284 29 100.0 32 ............................. TGATGGAAGGCATCCTTGACTCTAAGTCGGTC 5223 29 100.0 32 ............................. ATCCGACACCCCAGATTATCCGCTGGATCGGC 5162 29 100.0 32 ............................. GAATGGTGGTGACCCGTCGCTTCGCCGTGCGC 5101 29 100.0 32 ............................. GACGATCCGGGTCTGAAAGCGGCAGCGGAGAT 5040 29 100.0 32 ............................. GCAGCGCGGGCGTCTTCGGTAACGGCTGCGTC 4979 29 100.0 32 ............................. GTGACGATGAAATCCTGCCAGTTGATCTTGTA 4918 29 100.0 32 ............................. GTCACCGCAGAGAGCCAATACACGCCGGACGG 4857 29 100.0 32 ............................. CTGTCCGCGAACAAGCCGCTGCTTACGCCGGG 4796 29 82.8 0 .....A..................TCGA. | G [4769] ========== ====== ====== ====== ============================= ================================ ================== 30 29 99.3 32 GGCTCCCCCGCACACGCGGGGATCGGCCC # Left flank : GAGGCGACGAAGAAGCCCGATATGCCGATCGAGCGGATCACTCGGCGCCTGGCTGGCGGCATTTTGCAGCGAGAGGGCGTGATTCCCGCCATGATCGACCGGATCAAGGCCTTGTTTGAGCCGGAGGTATAGCGCGTCATGCCGATGACCCTGGTAGTGACGCGCGATGTGGAGGATCGCTACCGTGGCTTCCTCTCCTCGGTGATGCTGGAATTGGCGCCGGGGGTCTATACCGGCCCGCGCCTGAGCAGGGCGGTTCGCGAGCGGGTATGGCGGGTGCTGAGTGAGTGGCATGGAGAGCTTCGGCGCGGGTCGATCATCATGACCTGGCGGGATGTGAACGCGCCCGGCCATCAATCCATTCTCACTTTGGGCGAGCCGCGACGGACCCTGGCAGACCTTGATGGTGTCTTGCTGGTGCGGCGCGAGATCTAGAATTTGCCGCTTTGTCTTGCCCTGTTCTTTGACAAGTGAATAGAGTCATATATTTAAAGGCAAGA # Right flank : GCACTCGTCCTGCGTACGCCGCTGGCCGGGCGGCTGACGAATTTCGATCTCCAGCCCGGCCAGTCCCTCAAGGCGGGCGACAAGATCGGGCAGATCGACAGCGAGGGGCGCTACCGGCTCGACGCGGATATAGACGAGTTCTATCTCGGCCGCGTCGCCGTCGGCGAGCGGGCCGAGGCAGATATCGGCGACGTGAAACTCCCCCTGACCGTCTCCCGCGTGCATCCGCAGGTGACGAACGGCCAGTTTCGCGCGGAGTTGACCTTCGACACGCCGCCCCCCGCCAGATTGCGGCGCGGCGAGAGCGTGGATATCCGCATCACGCTGGGCGAGACGCAGACGGCGCTCGTGCTGCCCAACGGCGCATGGCTGGAGGCCGGCGGCGGGTCGTCGGCCTTCGTCATGGCCCCGAACGGACGGAGCGCGGACCGGGTGAGCATCGCCTCCGGGCGGCGCAATCCCGAGCAGGTGGAACTCACCGGCGGCCTGCGCGCGGGCGA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACACGCGGGGATCGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //