Array 1 3177-3504 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAEMFI010000039.1 Vibrio cholerae strain Vc518 NODE_39_length_8606_cov_117.952867, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
      3177	    28	 100.0	    32	............................	AAACAGGAAAAACAAGATGCGGCCATCTACGA	
      3237	    28	 100.0	    32	............................	TGATTCAAATTCGGACGTTGTTCAATCTGTTA	
      3297	    28	 100.0	    32	............................	TAAATGAAACTGAGCATTTCTTGCTTGAGTCC	
      3357	    28	 100.0	    32	............................	TATAACTCTGGTCGCCTATATGTTAACGGGCT	
      3417	    28	 100.0	    32	............................	TTGCACCAGCCGATCATGTTTCGGATTTGCTG	
      3477	    28	 100.0	     0	............................	|                               	
==========	======	======	======	============================	================================	==================
         6	    28	 100.0	    32	GTTCACTGCCGCACAGGCAGCTTAGAAA	                                	       

# Left flank :   AGCAAGCAACTTTTCGAACTTTCTGGTGAGGGTACACAACCTATAACGTTAGAGCCTCAGCTAAAAGAAATTGTAGACTTTGTTATTAACGCTACAAAAGATAAGAATTACGAAGAGTTTATAAAACTCGTCTACTCGACATACCCAGTTTTATCTAGTAATAAATATAGCGATTTAGACTTGGTTCAAAAAGCTAGAGAATATAAGGCTCATCTCGTCGCACATTAGAATGCTAACAAAGCATTTAAGTGGGACTCTCAACGCATGGCATTTTTGTCATGCGTTTGTTTTTGTGATTAAGGTGCTATGCATCAATTACGGTTGTGCGTTGTTCGCCCCTTAATGCGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAGTTTTAAGTTATTGATTTATATTGATAATAAATCTAGTAAAAAATAAAAGGTTATTTTGGGAAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAATTTTTATA
# Right flank :  ATATTTATAACTTTGGCATTTGGGATCGGCCAGTTAACAAACGCCTCAAAGGGACTGTCAACGCGTAGCGTTTCCAGTCCCTTTGAACCGCGGTGGTTATGGTTGTTGTATTTAAGTTTAGTGTTAATGCGTTGCCAGCCCCTTAGGCGGGCGTTATGCGATTAAAGGGAATCATCGACTAATGTTGGAAATTGAAAGACTTAATGAATCACATATCAATGCTATTCAAAAAGTGAGCGTTGAAGATGAACAGTTAAGATTTGCTGGTACAGCAGAGGAATTTCTGCAAGACGGCAGTGATACAGCTCATCTCCATGTCATCAAGCATGATGGTTCAATTGTTGGCTTCTTCAAATTGGACATTGCTTACTCAGAAAGTTATCAATTTTGTCCATCTGACGGGCTTGGTTTAAGATTTTTCGTTATAGACAAGTCGCAACAAGGCAAAGGCCTTGGGACGAAAGCGGTAAAAGCATTGTTTGATTATCTGAAAAAGAGCT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGCACAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.00,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [80.0-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.51,0.41   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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