Array 1 72525-73809 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUJN01000007.1 Clostridium sp. AM28-20LB AM28-20LB.Scaf7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 72525 36 100.0 30 .................................... CTGCCGAATCAAACAGTCCTCCTACAAGTG 72591 36 100.0 30 .................................... CCATAGGGGGATTAATATGTCACCCAGCAC 72657 36 100.0 30 .................................... ATGCTTTTGCTGAATAAACCTGTCCTTGCA 72723 36 100.0 30 .................................... AGCGTCCTGCCGCTCTCTCCGTTCCAGCAG 72789 36 100.0 29 .................................... TCGTTCGGAATAAAAAAGGTAAGACGGTA 72854 36 100.0 29 .................................... TGTCGATTGCAGAGTATAGCAAAGTATAG 72919 36 100.0 30 .................................... TAACTCTTTTTCGTCACTTTCCCGCCACTT 72985 36 100.0 29 .................................... TGATTTTACTTGCCATGTAGATGTAAATT 73050 36 100.0 29 .................................... TTCTTTTACTACTAAAACATCATTAGCTA 73115 36 100.0 30 .................................... CAAAATACACAAGATAATAATACACAGCAC 73181 36 100.0 30 .................................... GAGGAATTCGACGAAGGCGTCATGTATCGT 73247 36 100.0 30 .................................... TTAAAAACGGCGGCTACGCCACCGACGTAA 73313 36 100.0 29 .................................... ATTTTCTACAATAGCTCTACAAGTAAGAA 73378 36 100.0 30 .................................... TTTTAGCACTTAGCCAATCACGCAACATAA 73444 36 100.0 30 .................................... TTTGCTGGGATTGTTACAAAGGTTTGGGGT 73510 36 100.0 30 .................................... GATAAAGTTAGGAAAATACGCAGAATCTTT 73576 36 100.0 30 .................................... GAGCACTCCTAGACAGTCCTACAGCCTTTG 73642 36 100.0 30 .................................... ATCAATGATGAATCATTACCAGATACCAGA 73708 36 100.0 30 .................................... TATGGAATGTTTAGCGTTTATCGTTGGATT 73774 36 83.3 0 ....................C..G.AA...G...G. | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 99.2 30 GTTTGAGAACCATGTAAGTTTGTAAGGATCTAAAAC # Left flank : TTTCACAGGAAGAATACTTTCTTTCAAAGAGTATGCTGAATACGGAAACAGTGCGTTATTTGAATGATATTAGTCAAAAGTTGCCGTATGCAATTCAATTTGTAACAGATTTGAACGAGGTGGAATTATTTAAAATATATGATGTTAAATTGGAAGATAAGTTCAGTTCATTGTTGGAAAAATTGACAGAGTATTTGAAAATATTGGCGCTTTTGAGGAATATTAGACTGGTTGTATTGGTTAATCTAAAAGATTATTTGAGCAGTACCCAGGTGAAGGAACTGTATAAAACAGTATTTTATTATAAAATAAATGTTTTGTTAGTAGAATCTTCACAAAAAGAACGGTTGAACTGTGAAGATTATCATATATTGGATGAGCAGGATTGCCTGATTGAGTTTTAAGTGGTAAAATATACAACGTGGTATTAGAAATATAGGCTTACAGCATATGTCAGTATGTAAAAGTTCGGTGAGAACCGTAAAATTTTTAAATTTGAG # Right flank : CATTTTTAAGAATATAGTAGAGATTCTAAGTCATAAAAAAGATATGTGCAATGTCCAATCATAGGGCGATTAAATGCCTGAAAAATGATAGTATCATTCTCCTTATGAGGATAAATCCAGGAGGAAAACAATGCCATTAGCCAACCAAAAATCTTATACCATAGAAGATATATACAATCTTCCCGAAGGCGCACGCGCCGAATTAATTGATGGTTCTCTTTATATGAGGGCGTCGCCCAGCCGGGTGCATCAGGAGATAGTGGGAGAACTGTTTGGGGTTATAAGGGATTATATCAAGAAGGAAAATGGTTCCTGCAAAACTTATGTGGCGCCGTTTGCTGTCTTTTTAAATCAGGATGATCGAACCTATGTGGAACCGGATATCAGTGTGATATGTGATTCGTCCAAGTTAAATGATAGGGGGTGTCTGGGAGCACCTGATTGGATTATTGAAGTGGTTACACCGGGAAGTCAGCGAATCGATTATATGATTAAGCTGT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAACCATGTAAGTTTGTAAGGATCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //