Array 1 105721-109405 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGTH010000002.1 Acinetobacter baumannii strain SP2486 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 105721 30 96.7 30 ............................A. GCCCAGAGTTAGCATCTTGATGGTTCTCAA 105781 30 96.7 30 ............................G. AAACAAAGACTTTGATTTAATCTGGTGGAA 105841 30 96.7 30 .............................G AAGCAGAACAAGTTGATATTGATTCACCTA 105901 30 96.7 30 ............................G. GAAGACAATAAGCGTATACCTATTCCAGAA 105961 30 96.7 30 .............................C TCGGCACAGGAGTGCATTCGAAGTTGATGA 106021 30 96.7 30 .............................G AATGGGTATTAGAACTCAGTGAAGATATGT 106081 30 96.7 30 .............................A CTGGCTCAGGCAGAGAAGGCATGTCAATGC 106141 30 93.3 30 ............................CA CTTGGGCATGTTCTTAGATCCAGACACAAA 106201 30 96.7 30 .............................C TACCTGCTAATAGCTTCTTTGCCCTAGTTC 106261 30 100.0 30 .............................. GCTTAACCTTCACGCCATTTGGATAAACTG 106321 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 106381 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 106441 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 106501 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 106561 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 106621 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 106681 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 106741 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 106801 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 106861 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 106921 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 106981 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 107041 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 107101 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 107161 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 107221 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 107281 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 107341 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 107401 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 107461 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 107521 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 107581 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 107641 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 107701 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 107761 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 107821 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 107881 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 107941 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 108001 30 93.3 23 ............................AA CAATTGCCTGAGAGCCACCAGTA Deletion [108054] 108054 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 108114 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 108174 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 108234 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 108294 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 108354 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 108415 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 108475 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 108535 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 108595 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 108655 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 108715 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 108775 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 108835 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 108896 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 108956 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 109016 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 109076 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 109136 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 109196 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 109256 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 109316 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 109376 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 62 30 95.7 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //