Array 1 1-682 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDGJ01000183.1 Calderihabitans maritimus strain KKC1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 1 29 100.0 37 ............................. TATTATCGCCAAAATTAATTAAGTCCTGTCCTGGCAA 67 29 100.0 36 ............................. CCGTAATAAAAGATTCTCTTGATGACGCTATATTTG 132 29 100.0 37 ............................. GATACTGATGCTATTCAGAAGTATGCTGTAATAGGTC 198 29 100.0 35 ............................. GGTAGGAGTTCCCTAGCTAAAAGGGCCAATAACTA 262 29 100.0 36 ............................. TTTGTTGAGAATATAGTTTCTCCATCCCTTTTTCTA 327 29 100.0 37 ............................. CTAAAGCATATAATACATTTCCAACAACGAAGCGAAC 393 29 100.0 37 ............................. TCATACAACCTTGCAAGTTGAAGCCGGTTAATCCCGG 459 29 100.0 36 ............................. TTGGTATTACGAAACACCTGGCGATCAACCGAAATA 524 29 100.0 36 ............................. TGCTAGGATAGAAAAATTTAGCCCAGGGGGGAACCC 589 29 100.0 36 ............................. GTTTTGATTTTACTTCACTTGCACAATACGGAGCAA 654 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 11 29 100.0 36 GTTCAAATTCCTCTATGGACGATGGTTAC # Left flank : | # Right flank : T # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAATTCCTCTATGGACGATGGTTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 447-603 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDGJ01000189.1 Calderihabitans maritimus strain KKC1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================== ================== 447 30 100.0 33 .............................. CCCATGTCCCTGCTTCTGAAAAATATGCTACTG 510 30 100.0 34 .............................. TTTTTTTCGTATTGCAGTTTCCAAATCTATCCCC 574 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== ================================== ================== 3 30 98.9 34 GTAACCATCGTCCATAGAGGAATTTGAACT # Left flank : GGTAACCATCGTCCATAGAGGAATTTGAACAAGAAAGGAACTTAAAGAGGAACTTCGGGAAGCCTAGTAACCATCGTCCATAGAGGAATTTGAACCAAGAAGAAGGAAGTAATAAAGAGCCTTCTTCCCTAAGTAACCATCGTCCATAGAGGAATTTGAACTGCTTTCCTTTCCCTGCGTTCTTCTCTCCTTCGTGCGTAACCATCGTCCATAGAGGAATTTGAACTCCTCTTAATTGGTCTGGAACAAGGGCGGTGGCGCGGGTAACCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCCATAGAGGAATTTGAACTAAATCTAAAAATTCTTCAAACTCACTAGTAGACTTAG # Right flank : | # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAACCATCGTCCATAGAGGAATTTGAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 1 82060-81704 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDGJ01000126.1 Calderihabitans maritimus strain KKC1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 82059 29 100.0 37 ............................. CTATGCATATGGCAATGTAACGTCCGAAACATACCGA 81993 29 100.0 36 ............................. TTACTCTCGAAAGGAGGGAAGGCGTTTGAGAAGGTT 81928 29 100.0 36 ............................. TAAGAAAATATGCTAGAGGTTTTTGATTATACTATG 81863 29 100.0 37 ............................. CTCCCCTACCCGCTGCCACCGGGGAAAAGTCATGGTA 81797 29 100.0 36 ............................. CTGCAGCGGATATTGTCTCGTTACCCACCAGGTTAT 81732 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 6 29 100.0 37 GTTCAAATTCCTCTATGGACGATGGTTAC # Left flank : | # Right flank : AGCAGTCGAAGTGTCGAATTCTCTTGGGATTGAGAGTATAAGAAGATTGGTTTTTGCGTCAAACTCTCGGTTTGCATTTTACAGTCACACAAGTTATATGAAGTTATCGGTTGGATCAGGGGTATTTGTAATAATATCACGTTGCAATTTACTCCCATCGTTTAGAGTATAAATTATGACAAAATCACGTTCTCTGTCAACGGTGGACTTCAAATCTCTTTTTAGAAGCGCCAGTTTCCCTTCGGGTAAATCTCCTTCAAATACCGATTTTTGAACATGCGTCAAATACTTTCGGCAGGTCTTCATAGTTTTAGCCAGCCGTTTCCTACCTTCCCTATCTTCAGTATTAATATCGTATACAAGTATAACCCTTATGCTACCACCACACTTTCATAGGAGTATAGGTATCTTCTTTCAAAATATGTTTAATTAGCTTATACAAGTCTAGGCGAACCAGACTTTTATACTTTATTTTTCTTTTTAAATTTCGGTGCAAAATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAATTCCTCTATGGACGATGGTTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 682-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDGJ01000091.1 Calderihabitans maritimus strain KKC1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 681 29 100.0 36 ............................. GTCTTTGCAGGTAAAGTACAGAGATAACAAAGGCGG 616 29 100.0 36 ............................. ACTTTCTTAGCTCTTCACTGCCTGCCGCCAAAAGTG 551 29 100.0 38 ............................. CTTCGAGTATTGCTATTTTGTGTGCTTTATTTACTCCC 484 29 100.0 36 ............................. CTTTTTGTTCCGGTGAGCGAACGTAAGTTTGGGAAG 419 29 100.0 37 ............................. GCAGAACGTGTGCTTGAGCAAAGAAGAAAAAGAGGAC 353 29 100.0 36 ............................. GGTAAAGCATAGGTATAGCTCAGCATAGCTTTGCAG 288 29 100.0 35 ............................. TTGCTCCGGTAAGCGAACGTGAGTTTGGGGAGGGG 224 29 100.0 36 ............................. TCTGCTACCAGTCTTAACAGAGATTGAGAAAAAACA 159 29 100.0 36 ............................. CCATTCCTCCGGCAGAAGTCTTTTTGCCTCCACCAA 94 29 100.0 36 ............................. GAAGCGGAGCGGTCCCTTGACACGGGGGAGGCCCCC 29 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 11 29 100.0 36 GTTCAAATTCCTCTATGGACGATGGTTAC # Left flank : AAGCTTGCCGGTGCAAACTATGATATCTTTTCTGCTCAGGCAATAGAAGCCATTACCTCCAGGTCCAGGGGTTGGCCGAGATTAATCAACAAACTGGCGGTTAATTCTCTTCTTTTGGGCTACCAGATGAGGTCAGAGACCATTGATGAGGAGATTGTCTTTAAAGCAGCTCAGGAGGCGGGATTATGATGCTACCTTTATGCTTTTAGGCATAGTTTTATTCTTAACCCCGTAATTACCAGCTTGAACTCATGACCGCACTTTTCAAGGGCTGCCGTTTAGCAGGGCGATAGCCTTTACCTTTGAAAAGGATGGGCATGAGTTCTATACTTTTTACAGGAGTTAGGCGTTCCAAATAATTCCTAACTTATCGTGATAATTTGAAAAATCTCATTTCCTAATCTAATTTGAACAATTTTCACGTTAGGATGTTTTTTTGCCCTGATATATTTTGAAAATTTGGGGTGGGTTTAATTTGCAAATTCACAACTACCGCCCAC # Right flank : C # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAATTCCTCTATGGACGATGGTTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //