Array 1 17606-13229 **** Predicted by CRISPRDetect 2.4 *** >NZ_QROP01000046.1 Prevotella copri strain AF38-11 AF38-11.Scaf46, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 17605 30 100.0 35 .............................. CCAAGAACTTCACTTTCTCCGAGCTGCACGGAGAG 17540 30 100.0 36 .............................. AGACATCATTTCAACTTTAATTACATAGCAAAATGA 17474 30 100.0 36 .............................. TTCTGGTTCTCAGGCTTCTTATTATTCCCAGATGTC 17408 30 100.0 36 .............................. GAATAATAATCCATTTTATCAATGAAATCATTATCA 17342 30 100.0 36 .............................. TGCCAACATACAGCTGGTCATCATCAGCATTATTAG 17276 30 100.0 35 .............................. TGACTTATGATGATGATAATTTGCCTTTGTTCTCA 17211 30 100.0 34 .............................. ATGTTTAACTTTATATTTCGTGACGTTGGCAGCG 17147 30 100.0 35 .............................. TGGGGTCTGCCGACGGCTTTCTTTTTGGCATTGCC 17082 30 100.0 33 .............................. CATTTATGCGGCTACTAAAAAGTTATATATATG 17019 30 100.0 36 .............................. AACACCTTATAAGCATTTGCTTGACTTGAATATTCA 16953 30 100.0 34 .............................. TTGTCTATAAAGATAATGGTCATTACAAATCTTA 16889 30 100.0 36 .............................. TACCAAGTTCCTTGCGGTAAATGTATCGCTTGCCAA 16823 30 100.0 35 .............................. TTGCTGATAGCGAGAGTCGGTCAAATCCATTTTCT 16758 30 100.0 36 .............................. AGAGTAATACGACCGCCAAACGGAATAAGGGTTCTC 16692 30 100.0 34 .............................. TAGTCAGCAGAATCGGTACGAGCATTCAAAGAAA 16628 30 100.0 34 .............................. TGGGATAGTAGCAGCGTTCCAAATCTCTTGCCAA 16564 30 100.0 34 .............................. TAGCTTGATAACCACCTGCAATAGTATTACCTAC 16500 30 100.0 34 .............................. TTCAGAACTAAAGGAGACTGATTAATAAACTTAA 16436 30 100.0 35 .............................. TTTTGTTTTTGGTATCGTCTTTTCTCAGAAAGTTT 16371 30 100.0 35 .............................. ACGATTTGGAAGTTATCGAGTGCGTAAAGTATGGC 16306 30 100.0 35 .............................. AATTTGAGGCGGAGCACAGAGCCGAAGAACGCAAG 16241 30 100.0 37 .............................. AGCAGTTGAGGGCATCGTGTTATTCGGCCTTCTCTCT 16174 30 100.0 36 .............................. TAATATTGGAACCTTCTGCAGGTTCGGGAAATATCG 16108 30 100.0 35 .............................. ATCAAGAATGCAGGTAACTTCATCCTTAATCTCGG 16043 30 100.0 36 .............................. TTAGTAGTAGAAACACTAAAAATATCTGAACCTTGA 15977 30 100.0 36 .............................. AGCGTTAGTTATCGTTAGTTGTTAAAGGCTCGCTTG 15911 30 100.0 34 .............................. GACTGTTGCTTAGCCATATCAGAAGATAAGAGAC 15847 30 100.0 35 .............................. AGTGCATAAATAAGCACCTTAATAACAATTTTCAA 15782 30 100.0 34 .............................. TCAGAACAAGGAAAACAACGGTACATTGGCAAAT 15718 30 100.0 35 .............................. CTTTATACAGTACTCTTCCCCAAAAACTCACAAAA 15653 30 100.0 34 .............................. CCATATAGCTTTAACTCCTTCCTCAAAATGCAAT 15589 30 100.0 34 .............................. AGCTTCACTGGCTTCGATGCGTAAAACCCCATCT 15525 30 100.0 34 .............................. TCAACGGCTTTTACGACTTGTAAGCGTAGGCCGT 15461 30 100.0 34 .............................. TTTTTCACTGTGCGCTACTCGGAAGGAAACAAAT 15397 30 100.0 34 .............................. CTAGGAGAAAGTACCCAACGACCAAAATCAGTAC 15333 30 100.0 34 .............................. ACTTGAAACTCAGCAGCATTTCAATAAATCACGT 15269 30 100.0 37 .............................. GACGGACAATCCGCTTTTGCGTGATTCTTTGATGTCT 15202 30 100.0 34 .............................. AATGTATAACATTTGTGGAAGGCTTTCCGGAAAA 15138 30 100.0 34 .............................. TTCAAAGTCGCTCCTCAGCGTTGCTTCTATCCTC 15074 30 100.0 35 .............................. TCGCGTATGAACCTGACCTATCTCCCGGAGATAAG 15009 30 100.0 37 .............................. ATGTTAAGATGGACGCGTGACATAAGTCCTAATTATG 14942 30 100.0 36 .............................. AGATTAAGGCAAAGTCTGCTACTTACGGTGATTTCA 14876 30 100.0 34 .............................. AAGTTTCGGTATTCAAGAATATACTAGAAACAAG 14812 30 100.0 34 .............................. TTATTATAAACCATACCTGCAATTTGTGACGCAG 14748 30 100.0 34 .............................. AGCCAATCAGCCAATTTACAAAAATTCTTACTAG 14684 30 100.0 35 .............................. TTAAGAGAGCTATTAACCTGAGGGTTAATATCAAT 14619 30 100.0 34 .............................. ATCAGCAAGGTTAGAGTTAACCTGAGGATTGATA 14555 30 100.0 34 .............................. GAAAGAGAACCTTGACCTAGATTAACAACAGACT 14491 30 100.0 34 .............................. ACTCATGGGAGTCGAAGAAAAATAGCAGATGCCA 14427 30 100.0 35 .............................. AGGGCATAAATCAATACTTTGATGATAATCTTTAA 14362 30 100.0 37 .............................. TTGCCAGCTTGCTGTTGAAGACGGTACAACTTATCAA 14295 30 100.0 34 .............................. TTTTTAGTGTTAGCCCCGCTTAGAGAGAGCGTCT 14231 30 100.0 34 .............................. GTGGTTAGGTATATCGGCCACCTGCGCTACGGTG 14167 30 100.0 35 .............................. ATAGGGCATGCACCGAAGTGCATAACCCTTGGATA 14102 30 100.0 35 .............................. GTTCTAGATGGAACAAGGTAATCAATGTTACATAA 14037 30 100.0 34 .............................. TGCAAACCCATGATATTTGAACGATTTGCCATGT 13973 30 100.0 37 .............................. TAGTTTGAATATTCTGCAAGGTAGCTGCTAAACCTGC 13906 30 100.0 34 .............................. TTCTTAGCGTCCTGCGCATCCTGGTAACTCTTGA 13842 30 100.0 33 .............................. GAGAGACTTCTTCTCTTGCGTAAAGCGTTGCTT 13779 30 100.0 37 .............................. TAATGTTTGAACGATTAGCCATAATCTTATAAATTAG 13712 30 100.0 35 .............................. TCGGATAGTCTTCGATTGAAAGAAGAGAAGGTGCA 13647 30 100.0 34 .............................. GCAGTAAAGAAGGTAAAGACTTGGGAAGACATTC 13583 30 100.0 34 .............................. AAAGAAACAAAAGGCTAGTGTTTTTCATAGGTAT 13519 30 100.0 36 .............................. ACTGAGACATAAAATTCTTAGTCTTTTCAACCTTAT 13453 30 100.0 34 .............................. TTTCTTGATGAAGTCGGCATTGTCCTTCTCGTAG 13389 30 100.0 34 .............................. ACAGTCTGCAAATTAGCTTGAGCAACACGCGCAT 13325 30 100.0 37 .............................. TACTGTAGAAATCTCCTTTAAGTCTTACTTTAACATA 13258 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 68 30 100.0 35 GTTCTAATCGCACCTTTATGGAATTGAAAT # Left flank : CTTTTAAAATGTATTGGTGATATGTATGTGATTATAGTTTATGATGTAGGTGAGAAGCGAGTAGGCAAAATGTTGAAACTTTGCCGCCAATATTTGTGTTGGATTCAGAACTCAGTTTTGGAGGGGGAATTATCTGAAGCTAAACTTCGGGAATTGCAAATGAAGATGAAAGCTATCATTGATGAATCCGAGGATAGTGTCATTGTTTTCACCAATAAAATGGGGTATAATATGAACAAACAGATTCTTGGAAAAGAAAGAATGTCTACCGATAATTTCTTATAAAGAGTTGTCGATGTGGTTCTATTTTTCCGTTTCTAGGTTCGGAAAAACCTCCGAAAGTGTTCTTTGACTTATTGAAACCTCCATAAATAGGCAGGTTGTCGTAAGGCCGCAGAAAAAATATCTTTAGGCATCGACATTTTTTCTGAAGATTTTTTTGTATCTTTGCACCCACAAACCCATAGACTTTTCGGGCATTTACGCCCAAGACTTAACGG # Right flank : TCAAGGAAGATGAAAACTTGTGGTACATCAATAATAATGTCCTGAGTCCACTTTAAAAAGGGGCATATTTTGAAGTGGACTCAAGATTATCCTTAGCATCTTGTTTAGATAAAAATGCTATTTTTAGTTATTGCTGTTTGATTAAACTAGGAAACTCAATCTTCACTCTCGCGCACGTATGTGCGTGAGATAAAAAATGGGGAAGAACCTGTTGGTATTCCCCATAAAACAAAAGTCGCCATAGCCTTGTGGCGCAGTCAACCACAACGAACAGTTGCTTGTACTTCATAACAAATAAGATTACTTTAACCCAAGTTTGACACTTTAGGGAAATTTGCATAATTTTTCGGGCGCACCAGTAAAATCCTGTGTCTATAATGTAGGATTATGTGACGATAGCGCTGTATCGGTACCACACGTAGCGTTGTAATCGGTACCATGCTATCACTGCAAGCGGTACCAAGATTTCAGTTCTGCTATGGCATCTGCCAAGGTAGGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTAATCGCACCTTTATGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA //