Array 1 91677-95276 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJDL01000017.1 Marinobacter halodurans strain YJ-S3-2 Contig_017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 91677 32 100.0 34 ................................ ATCAAGGCGCTGCTGCTCTGCCTGGCGCCATGGG 91743 32 100.0 34 ................................ CTGTTCGGAGACGCCCTGCTGTTAAGCGTGGGTA 91809 32 100.0 35 ................................ TGCGAACTGGACTACATGCATGAGCAGAAAATCAA 91876 32 100.0 34 ................................ CAGGGCAGGGGCGTGATTAGCCCCTACGACTATG 91942 32 100.0 34 ................................ CGGATGGAAGTGCAAGATCTTGGCATTGAGTGGC 92008 32 100.0 35 ................................ AGTAGTATTTGCTCAGGCTAATACTATAATACAAC 92075 32 100.0 34 ................................ ACCGTGGCCGATATCACCGGTGAAGCCGACCCAT 92141 32 100.0 36 ................................ CCTAAAATCCAGATATACCGCGCCTTACCGCTTAGC 92209 32 100.0 33 ................................ CCCGGTCTGCGGACGTTAGCGCCTCGTCATCGG 92274 32 100.0 34 ................................ TGGGGAGTAAGGCTATTCGGAATGCGAGGAAGAT 92340 32 100.0 34 ................................ CAGTGGCGCCAGCCGTTGGGGCAGTGGAATCCCC 92406 32 100.0 34 ................................ CGATGGGAGACCGAGGGCGACTCGCTGATCCTCG 92472 32 100.0 35 ................................ GGGCTCGTCGCCCTGACGACCGCGCAGCTGTCAAA 92539 32 100.0 33 ................................ GGGTCTCCGATCCATCTTGCGGCGCGTAAACTG 92604 32 100.0 33 ................................ GCCTCGGCCTGCGCGATCGCGTCGATGATCTGC 92669 32 100.0 33 ................................ TCGTTGGTCGCGCCGCCTTTCACGAACGGGACC 92734 32 100.0 34 ................................ GTTGGTGGTGATCTCGATGTTAGGCATTGGAAGC 92800 32 100.0 34 ................................ GCCGGCCCATTTTGCCTCAATGCCGACGTCGGTC 92866 32 100.0 34 ................................ TCGTTGGTCGCGCCGCCTTTCACGAACGGGACCA 92932 32 100.0 34 ................................ AGATATATTTTGAATTCGTTGATCGCTGCCTGGC 92998 32 100.0 34 ................................ ATCAGGCCGTCGATCGTGTCGCGGATTGTCCCGA 93064 32 100.0 34 ................................ AAGGACGGCAGCGGGCACCAGGCATACCCGGCCA 93130 32 100.0 35 ................................ TACAAACTCGACCATGACGCCCCCGTTAGATCAGA 93197 32 100.0 34 ................................ ATAAAGCCAGGGGGTAAGCCGTGAAGTTGTCCAG 93263 32 100.0 34 ................................ CACAAGATATTGGGGTGTAGTACCCAGTCCATCT 93329 32 100.0 35 ................................ CAAAAGGAACAAATCCGCGCCCTGGAACGGGACAA 93396 32 100.0 34 ................................ ACGTAGGTCATGCGGTGGTATTTCGACGGGGCGG 93462 32 100.0 33 ................................ TACAAACTCGACCATGACGCCCCCGTTAGATCA 93527 32 100.0 33 ................................ AGGTTGCCCGGCCCCCAGTTATAGGCCGCCAGG 93592 32 100.0 33 ................................ ATGTAGCGCGCCGCGTAGTGGATGGACGCCACC 93657 32 100.0 34 ................................ CAGGCCACACTCGCGTACCCGCATCCTGGCGTAG 93723 32 100.0 34 ................................ TCGCCCACGGAACTGGAGTGGCCGGCCTTCCAAA 93789 32 100.0 34 ................................ TACGGCAGCGAGAGGACGGAATATTGACCGCAGT 93855 32 100.0 35 ................................ CTGGTAGGTCGCATCCTTGCCCGGTGACACGTAGT 93922 32 100.0 33 ................................ AAAGGCCAGTTTGGTTTTGGTGACAAAATCCAG 93987 32 100.0 34 ................................ AGCTCCAAATAGCCGTTTTCGAGCGTTCCTGTGT 94053 32 100.0 34 ................................ ACATGCTGCAGGGAGCCCATATACAGCGCGGCCA 94119 32 100.0 34 ................................ CAGAAAGACAGGCTGATTGCGGAGCGTCTTTCGC 94185 32 100.0 33 ................................ ACGAAAAGCGGGAAGACGGCAGAAGCTGCGACA 94250 32 100.0 34 ................................ TTGATTGAGAGGATCTCGCCGATGCGATAGCGGG 94316 32 100.0 36 ................................ GCGGGCTCGCCCCCTCCCCTGCGGACCTGCCAGGTC 94384 32 100.0 33 ................................ GGGCGGGTACACAGGAACAGCGGGTTGGATTGA 94449 32 100.0 34 ................................ ATAACGCGTCAGCCTGCACAACTCGCCCTCACGG 94515 32 100.0 34 ................................ CAGATCTTGAAGGTGACCCCCTTCTTCGTCTGGC 94581 32 100.0 35 ................................ CGAAGTGGACATTACCGGCCGCGTCGGTCCATTTA 94648 32 100.0 34 ................................ TTTATGAGGGCGGGCAGAACCAGTCACCTATGGA 94714 32 100.0 35 ................................ CTCGAGCTGGCGGAGCATGCTGGCGGTGATCTTCA 94781 32 100.0 34 ................................ TGGAATCTGGCCCTCGATACCGCGCGGTCAAAGC 94847 32 100.0 34 ................................ TAAAAACACCCGTCCCGGGCCCGCGTTGGGCGGA 94913 32 100.0 33 ................................ TTGCGGCCTGAAATCCAGTCATAAACCGTCTTC 94978 32 100.0 35 ................................ AACAAGTTGGATCAGGTGCGGGTGGCCCTGGAAAT 95045 32 100.0 34 ................................ TTTTGTGACCGGCGCCTGTTGGCCTGCCGGGCGC 95111 32 100.0 34 ................................ TCCTGCCCGGCCGTGAACCCATACCGCCCCGCAG 95177 32 100.0 36 ................................ CTGGTTGATGCCGAAGGTGATCCAGAACAGCATGAG 95245 32 71.9 0 ...........T.T....A..C...GG..CCG | ========== ====== ====== ====== ================================ ==================================== ================== 55 32 99.5 34 GTCGCGCCCTCCGCGGGCGCGTGGATTGAAAC # Left flank : CCTTGTGTGCTCCGATAGGAACCCTACAATGATGGTATTGGTTACATATGATATTTCTCTGGAAGACACTGGCGGATCCGCTCGTCTGAGGAGAGTTGCCAAAGCATGTTTGGATTATGGAGTGAGAGTTCAATACTCGGTCTTCGAATGCGAAGTTGATCCGGCCCAATGGACTTTTTTCAAAGACCGGTTGCTGAGCCTTTTCGATGAAGAAAAGGACAGCCTGCGGTTTTATAAACTGGGGAAAAACTGGAAGAACCGAATCGAACACCATGGTGCCAAACCTGCACCCGATATATTCCGGGACGCAATGATTCTTTGAACGCTAACCGGCGGTGCTCATTAAAAACCCGGAATGTTAGCGAAAAGCCAGGGCTGTTGTGGTGCCTGGCTTTTTTCTTATGAGGTAAAACTTTTTCCAGTCAGAGGCCGTCAGAAATGGTTAGGATAGCGTTTTGGAGTGGTTGGTCGTTTATAAGTCAATAAGATAGGATGGGGCG # Right flank : GCTGCCAATTCCCATATTTACTCCTCGGCCACTCCGTTCCCCGCCTTCGCGGGGTGGGCCGTACTGACTTCGTTGCTGTTTGTTGTGAGCAAATAGTGCTTATTGCCAAGGTTAGGCCCGTCCGATATGGTTGACTTCGTTTTAGGTTGTCACCGTGCTCAGGATGAGTGCGACTCCTTTTCAAGTTCAAGGAAGAGACGATGCGTGATCATACTGGTTTGCAATTCACGGCCCGCCTTGGGTCGTTGCCCGACGATACCTTTGTCGTGGCCGCCTTCGAGCTGAAGGAGGCCTTATCCCGACCGTTTAAACTGACCCTCAAGCTGGCCAGCACCTTCGCCGACCTCGCCGCCAGCGATGTGCTGGACCAGGGCATGGAACTGGTGATCTGGCAGGACGGCCAGGCCCTGCGCAACGTCCAGGGCGTGGTGACGTCTTTCAGCCGGGGCGACAGCGGCCACCGCCGCACCCGCTATGAAGTCGAGGTGCGACCCGCCCTG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTCCGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCTGTGCGGGCGCGTGGGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //