Array 1 27222-28181 **** Predicted by CRISPRDetect 2.4 *** >NZ_VBSD01000032.1 Apilactobacillus kunkeei strain UASWS1867-NN5 Contig33, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 27222 36 100.0 30 .................................... TGATTGGCAAAAGATGTCAATTGATGACTT 27288 36 100.0 30 .................................... AGTTTCAATCATTCATTGAATATGTACATG 27354 36 100.0 30 .................................... TTAGACAACTACGAGTTGAATAAAGAATTA 27420 36 100.0 30 .................................... CTTAGTGGTAAATGGTACCGACTGTTCCAA 27486 36 97.2 30 ............................C....... CGTATATGGACAATCAATGGCCACAGGCTG 27552 36 100.0 30 .................................... GCTGCTTTCCAGTTCGATACATATATTCGT 27618 36 100.0 30 .................................... ACTATAATACATGCAATGCTTGATGATAAT 27684 36 100.0 30 .................................... AAACATACCCTTTTCATTTTCTTGACTTAC 27750 36 100.0 30 .................................... GACCGTTGTAAACAATAAAGCCGTTGTCGT 27816 36 100.0 30 .................................... TAACGAGCTACTAATTGCGGTTGCTACAGC 27882 36 100.0 30 .................................... TGTACAGTTCATTCTAGCTGGTGCAAGTTC 27948 36 100.0 30 .................................... TTTTTTTACAGACCGACAAACAAAAAAATT 28014 36 100.0 30 .................................... TTGAAAATCATAGTCCATCATTCCATTGTC 28080 36 100.0 30 .................................... GATTAATTAAAAAATCGATCGACGGACTAA 28146 36 94.4 0 ................................A..A | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 99.4 30 GTTTTAGAAGTATGTCATATCAATGAGGTTTAGAAC # Left flank : ATGGTCTATCTACTAAACAAATTAGTTCTATTATAAAGAAGGTAGTTGGTTATTTTGATAATGACGATATCGACTATATGCAAAGAAATATTTCATCGTTGAATAATTTTATTCAAGAAAAATTGTTTTTTTGGGATATACCATTATTAATTACTCAAGATATTGATATAGAAAAAACTATAAAAAAGCTGAATATTCATTTAAATCCAGACATTGAAGGAAATCCTTATGATATAATAGAATTATTGATAAGGTTAAAGATGGAAACTCAAGATAAGTCATTGATTGTTGTAAATAATTTAGCTAATTATTTGAACAGCGATCAGCTACAAAGCATTGAAAAATTATGTAAGGAGTTTGAAGTTCCATTATTAGATATTGAATTTGGTAAAAACAATGATATTAATAATACTGATTTTTCATTTTGTCAGTATTACTTTATAGATGATAACTTTGTTGACTGGCATTCTTAAAAATTAGATTTTGATTATAAAATATCG # Right flank : AGAGCTTGCTATATAAGCTCTTTTTTAGAAATAGATTTAAAATAAGATATATTCTATCTTATTAATTATGATTACGTTTCAGTTATCTATGATTGTAAAATGAAAATTTATAATAAAGATGTAGTGAATATTCAGATTATATGATTTTAACACTCACAATATAATCTTAATAAAAAATTAATAAACTTTACTTTTTCTTAATATTTTCGTATAATACAGAAGTAGGTAGTCATTCCAGATGATTTATCTTAATGTTTATTATTTACAACTCTCTATAAATCTAATTGTGCACCTCTCTATGTAATCACGCACAAATTAGGTTGGCCTGTCCGCTTGTTGGGCAGGCTTTTTATTTACTCTATTTTATTTATGAATAATGATATACTTAATTTATTATAGATTTGGAAGATGCTATTAGAATTAAAGGAATTATATTAGAAATAATCGAATCAATATTTTGGGGTATGTCCAGAACTGTTGCAGAATATCTTTTTGAACAT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTATGTCATATCAATGAGGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //