Array 1 3899198-3902431 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP081916.1 Bacteroides faecis strain BFG-108 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================================ ================== 3899198 29 100.0 36 ............................. TCTATCCCTTGCGCAATGACTCCCCACGACTTTTCG 3899263 29 100.0 34 ............................. ACTAATGAAACATACTGGGAAGATGTGCTCTGGT 3899326 29 100.0 35 ............................. ATCAGAACTTATACAACTTTATTCTTTAAGACAAA 3899390 29 100.0 34 ............................. GCCGATATTGTTTAGCTGAATGTTATGCCCATTT 3899453 29 100.0 36 ............................. TCATTTATAGCTCAACAGCCCAATGGTCTTTTCTGT 3899518 29 100.0 37 ............................. CTACCATCTCCCAGATAGGCAAGAGACAGGCATTTGC 3899584 29 100.0 36 ............................. GAGATGGATATGTCGCTGATGGCGTTAGATGATACG 3899649 29 100.0 34 ............................. AATTTCTTACGAAATACAGTGATAACAGCAAAAA 3899712 29 100.0 36 ............................. ATAATAAAGGGAGTAACACCTTTGTCTGCGTATGTG 3899777 29 100.0 35 ............................. AGTGATACCGGTCGTCGGCCTGTGAAATCAAATCA 3899841 29 100.0 34 ............................. ATGGTTTCAAGACAGACCTCATACATACCGATAC 3899904 29 100.0 34 ............................. GGGATTAAGAGTTGAGACTACTACCGCGGTGAAA 3899967 29 100.0 35 ............................. ATGTTATTCAATTGAATGTTGTGACCTCCTACAAA 3900031 29 100.0 32 ............................. CAATATGCCATGGAGCTTTATGCGGTTGACAA 3900092 29 100.0 34 ............................. ACGATAGGCAATGCAGTAGCGAGATATGAGAATG 3900155 29 100.0 35 ............................. ATCACATGGACAACGAACATGCCTGGACAGGAAGC 3900219 29 100.0 34 ............................. ACCAATGAAGCATACTGGGAAGATGTGCTCTGGT 3900282 29 100.0 37 ............................. ATAAAAAGGATTAGTTCCCGCGCCAGTACCATTATTA 3900348 29 100.0 35 ............................. TCGACTAATGCAGAGAAAGATAAATCAGACTCGAA 3900412 29 100.0 34 ............................. TATATAAGAAAAGTCAGTCCATTTTTTCATTATC 3900475 29 100.0 34 ............................. TGGCTATGCATCCCGTAGGAGCCAGCCATTCCTG 3900538 29 100.0 35 ............................. ATGATTTCAATGCATTATTATCCAAAAAGATCACT 3900602 29 100.0 38 ............................. ACTTGTATAGCTTATGTGTTTTTTCTCTATCATCCTCA 3900669 29 100.0 35 ............................. ATGTTAAGTCTAATCTATAAAGGAACTGATGGATA 3900733 29 100.0 34 ............................. GCCTAAACGATTCGCAATTTTTAGCAAGTAAAAA 3900796 29 100.0 35 ............................. ATAATCCGTGAGGCTGGTTCGACTCCAGCACTGTC 3900860 29 100.0 35 ............................. AAGAGTATCCGAGAGAGTATATGTCCTTCCGGAAG 3900924 29 100.0 36 ............................. CTTCTTCTTTCCCGTAAGGTATCAGACCTCCGTATG 3900989 29 100.0 38 ............................. ATTAAAAAAGGTACACTATTCTCACGAACCATGTACCG 3901056 29 100.0 34 ............................. ACGATAGGCAATGCAGTAGCGAGATATGAGAATG 3901119 29 100.0 35 ............................. ATCACATGGACAACGAACATGCCTGGACAGGAAGC 3901183 29 100.0 34 ............................. ACCAATGAAGCATACTGGGAAGATGTGCTCTGGT 3901246 29 100.0 37 ............................. ATAAAAAGGATTAGTTCCCGCGCCAGTACCATTATTA 3901312 29 100.0 35 ............................. TCGACTAATGCAGAGAAAGATAAATCAGACTCGAA 3901376 29 100.0 34 ............................. TATATAAGAAAAGTCAGTCCATTTTTTCATTATC 3901439 29 100.0 34 ............................. TGGCTATGCATCCCGTAGGAGCCAGCCATTCCTG 3901502 29 100.0 35 ............................. ATGATTTCAATGCATTATTATCCAAAAAGATCACT 3901566 29 100.0 38 ............................. ACTTGTATAGCTTATGTGTTTTTTCTCTATCATCCTCA 3901633 29 100.0 35 ............................. ATGTTAAGTCTAATCTATAAAGGAACTGATGGATA 3901697 29 100.0 34 ............................. GCCTAAACGATTCGCAATTTTTAGCAAGTAAAAA 3901760 29 100.0 35 ............................. ATAATCCGTGAGGCTGGTTCGACTCCAGCACTGTC 3901824 29 100.0 35 ............................. AAGAGTATCCGAGAGAGTATATGTCCTTCCGGAAG 3901888 29 100.0 36 ............................. TTTCTTCTTTCCCGTAAGGTATCAGACCTCCGTATG 3901953 29 100.0 38 ............................. ATTAAAAAAGGTACACTATTCTCACGAACCATGTACCG 3902020 29 100.0 35 ............................. GTTGAAAAAGAATTTGCAATAGTGAATAATGTTCC 3902084 29 100.0 96 ............................. GTCGTTACCATCACGTTCGCCCATGTTCTCAAACTCAGTATTAATTGAGTGGAATTGAAACTTCCTTCAGCTAAGAAGAGAGACACACATATAACA 3902209 29 96.6 36 ..........................G.. TCATCTCGAAGTAGCCGGCGTCAATGAACCTTTGTT 3902274 29 100.0 36 ............................. ACTCCTGCAACGCTAGTAGGTAAATTGTCAACCGCT 3902339 29 96.6 34 .................C........... CTGCTTTTCCCGCTGAAATATACACCCAAATCCG 3902402 29 86.2 0 .................CAA......G.. | T [3902424] ========== ====== ====== ====== ============================= ================================================================================================ ================== 50 29 99.6 36 GTATTAATTGTACCTAGTGGAATTGAAAC # Left flank : CCTTTTAAGATGTATTGGTAGAGTATGTATGTCATTTTAGTATATGATTGTGGTGAAAGAAGGGTGGCTAAAATGTTGAAACTGTGTCGTAAATATTTAAATTGGATACAGAATTCTGTTTTTGAGGGTGAAATATCTGAAGTACGCCTAAAAAAACTTCTATATTCAGCTAAAGAATTTATGGATGAATCTGAAGATAGTATTATTATTTTCAAAGGACCTAATCATAGCTCTTTGGAAAAAGAAGTAGTGGGAAAAGAACGGTGTAGTATAGATAATTTTCTGTAATTTAGTTGTCGGAGACTTTAGTAATGTTTCCTTTTTAAGGAAAATTCTTCTTAAGAGTTCTTTGACTTGTTGATTTACAGCAATATAAGTGTGGTGTCGATCTCCAGCACTTTTTGTACTTTTAGGGATCGACACTATTTTTGACCTTTAAATATCTTTTGGGGGATTGTAACTCATTCATTTTAAGTGGTCTTTGGGGGATTGATGGTAGA # Right flank : CATATTTCAATTGTTAATAATATATAAGACTTTTCTCTTATATATGGTTCAAATTACGTTTTGAATCTGCAAGGTACACATATTAATACAGTTGTAGGCCTTTATTGATTGTGGGAATATTGTTTTGTGTAATTACTAGATGAATAGTAGTTTTGGCTTTTTATTATTCTGTTATTATAGTTTGCGTAATAATGAAGATGATCCATTTTTACCACTCATAAGAAATACTTACCTGAGGTACCCATTCCCATTTCTTTCGTATGGTGTTGTATTGATACCGCACATCGGTCTTCAATTTCCAGCCTTTATTTATTTTAAGGATAATGTTGCTGCCCAAAGTAGTTGGTATCACTTCAGATGAAAGTCCCCGATATCTTCGGGCATCCAGATTTTGTTCACCATATATGCTGAGAGACCATTTTTTAGAGATGCTATAATCCATCTGAACTTCAACATGAAAATGGTCCGGATTTTCTCCAAAGTTACTTTTACTGTGCAAA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGTACCTAGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 2 5176442-5179013 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP081916.1 Bacteroides faecis strain BFG-108 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 5176442 47 100.0 30 ............................................... AGTATTCAGGACCGGGGACCGGAAAGTGCG 5176519 47 100.0 30 ............................................... TATTTCCCTACCGTTTGCCTGCTTGACATC 5176596 47 100.0 30 ............................................... TACTCCCTTTATAATTATCTGCTGTAGATG 5176673 47 100.0 29 ............................................... GATGCAAAAGCGGGAAGGAACCACTTCCG 5176749 47 100.0 29 ............................................... CGGGTGCAGATGGCAAACCGGGAGAGGAT 5176825 47 100.0 30 ............................................... GCTAACAAGTGAAGTATTAGACTTAATCAT 5176902 47 100.0 30 ............................................... AGAAAGACCTCACGTATATAAAAGTTTTAT 5176979 47 100.0 29 ............................................... CTGTCGGCAACAACTCTGGAGTTAAGTGA 5177055 47 100.0 30 ............................................... TACCGGATTGGAGTTAAACGCTAGAAGCAT 5177132 47 100.0 30 ............................................... TATTAGGATTAACCTTAAAGAACGGATACA 5177209 47 100.0 29 ............................................... CAGTCTGCTTGCGATGTTCTCCATTCGCG 5177285 47 100.0 29 ............................................... GATATTAATTAAATGATGAATACTTAGCT 5177361 47 100.0 30 ............................................... TGCCATCTCTTTGCTTGCGTAATTTTGATT 5177438 47 100.0 29 ............................................... TTAGGAAAGAATACACTAGGCGACAATAA 5177514 47 100.0 29 ............................................... TTATTACGATTGTCACGAATGAATGAATT 5177590 47 100.0 30 ............................................... TTCAGAGATATTGCGCATGAGAGGCATATT 5177667 47 100.0 29 ............................................... CTGATAATGATCAAGAAGACCTCTGTAGG 5177743 47 100.0 30 ............................................... CTCAGAAATGGGAAGAGTTCAAGATATACC 5177820 47 100.0 29 ............................................... ATTTATAGATATTTGCATTAATGCATAGA 5177896 47 100.0 30 ............................................... GCGGCTGCACCGTTGTTAAATGATCCCTGC 5177973 47 100.0 29 ............................................... TTGTTAATTGTTATCTTTTTGATTACACT 5178049 47 100.0 30 ............................................... ATAAGTCCATCTCATTGTTAGATCACACAT 5178126 47 100.0 30 ............................................... TATCCATTGATTTGGAGTTACTTTCATGGT 5178203 47 100.0 29 ............................................... ATCTTTCCCTGCTTAGGCGTGGTAAACAA 5178279 47 100.0 29 ............................................... TCAAGAGCACGATATCCATGACCAAAACG 5178355 47 100.0 29 ............................................... GGGTATAAAAATGATGGATCACAAGATAA 5178431 47 100.0 30 ............................................... ATATCAGAAATTGTAAGCGTTAATTTTGAT 5178508 47 100.0 30 ............................................... TATTGTGGTTATATGCTGAAGATAAAGGCA 5178585 47 100.0 29 ............................................... ACTTCATGGTATTAAACAGACGTTACGAA 5178661 47 100.0 29 ............................................... ACAAACGAAATCTGCAAATGTGGAAAGAG 5178737 47 100.0 30 ............................................... GAGATTGGCTAGAAACAGTATATACAGCGG 5178814 47 100.0 29 ............................................... CTTAAATTTTGTATACCTATGAAACTTAC 5178890 47 100.0 30 ............................................... ACGCTTCTTCAAAAGTAAGCGCGAAGAATG 5178967 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 34 47 100.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGC # Left flank : TAAACGATTTCTTTATTTAAGTAAAATATACGACGGTTATATTGCCGCATACGCTGAACAATAGTGCCGGAAACAAAACTTCCACGGATCAAATCCTTCATGGTACATTCCGCAATCCAAGCCGCATCACGGACATCACTCTTCCTACCAGGCAACTACTTGATGAAATAAGAGTTCACTAACTTGATGTAACTCTTCCAACTCAGGCGTCAAAACACCATATTTGAATTCTAGTTTGTCGCCATTATCATTCAAGATACAGGCAAATACACTATCTTTGTGAACGTCAAGACCACATACTATTCTCATTGGAGATAACATTTTTGAGACTATGAGCTCGTCAAACATTTATTTTGAGGCTCGTCCATCGATACCTCTCACGCCATAAAGATAGGGGTGGGCTTGACTTTTTCTTATTACACTGGCATATAAATCGCAATTTATATCTAAATTTGAGCCATTGAATACAGCGCCATCTCTTTTTTTACGCAACTTGCTTT # Right flank : CCGAATCTACATATCTAACTGTAGCACAACATACTAAAGCCTAATATAGGAAATAAAAAAGAAGCTGTATTTAACAAAAAATCCCGTTTTTTCTACGGGATTTTTTATTTTAAAATAGTTCTAACTGTTGTCCTGGCGTATTCACCATCTGTATCTTTTTCCCATAAAAAAGTTCAATATCCCCAAATTGTTTATCAGTTATGCACATAATTCCAATCTGCCCATATTCAGGAAGAAAAGATTTAACCCTTTTTATATGTACTGCTGCATTTTCACTACTAGCACAATGTCGTACATAAATAGAAAATTGAAACATAGTAAAGCCGTCTTTCTGTAAATTCTTTCTAAAATCAGCATAGGCTCTTTTATCTTTCTTCGTCTCCGTTGGTAAATCAAAAAGAACAAGTACCCACATAATACGATATTCACTAAAACGATCCATTAACGTTCGGGATAACTTATACGACGTAATTCTCCATCAAAACACTTATACAATGATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //