Array 1 131373-131707 **** Predicted by CRISPRDetect 2.4 *** >NZ_MZMW01000003.1 Levilactobacillus brevis strain CRL 2013 scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 131373 29 100.0 32 ............................. GATAATCAAGTTTACGTGAGAGTTAAGGGTGC 131434 29 100.0 32 ............................. CATCATATCCCACCCTCATATCCATTAATGGG 131495 29 96.6 32 ............................C GTTCTCCGCTAATCTAGCCGTCTATGATACTA 131556 29 100.0 32 ............................. TAATGGATAAAGTCAAAGCTGCTGAAAGCGAG 131617 29 93.1 33 ..........................T.C GGCCAATGATGTTGAATTTGCGCTCGGGTGTTA 131679 29 69.0 0 ..T........AT.....T...CAC.A.C | ========== ====== ====== ====== ============================= ================================= ================== 6 29 93.1 32 GTATTCCCCACGGGTGTGGGGGTGATCCT # Left flank : CGTACCCGGCCGTGTTCCATGATAATGAAGCTGGTGGGTATATCGTAACTTTCCCCGATATTGAAGAAGCTATGACCAGCGGCCAAACCCTAGGCGAGAGCCTGGTCAACGCGACAACCGTTCTCGGTCAGACGCTCCATCATCATCCGATGGTACTGCCAACAGCGACGACCATCACTGAGTTGATGCATCAATACCCCATGGCATTCATTCAGTTTGTCGCGGTAGATTTAGACCAAGTCATCGAACACGCAGTACCAACTGATCAAGCAGACCTACAATTGACTTAGTCATTGATGAAATAAAGCATAAAAAGCCGGTCCCGGTTAAAGGGATCGGCTTTTTATTATGTATGAGAGTGAGTTGTCGGATAACGAACCGGATTGCTGTCGCTACGATTCTGCGGTATGCTATAAAATATAGATGAGTCTCATGACGAAACTCATAAAAAACGCCGGTTTTTAAATTTTAAAATTCCGGTGTGGCGGCGTTTCTTTAGT # Right flank : CAGTAGTTGTTCTCTTCTAATTGCCGAATATAATAAAATAACAGCGTACCTCAATCATGGGTACGCTGTTATTTTTAGTTTACTCAGCAAGACGAATGCGAATATCGCCAATCTTTTGTTTTAGATGGTTAATGGATCGGGTTAGTGTTGTGCGTTGTTCTTCCGATGCGCTTAACTGGGCTTGGAGAATGGCCAAGCGTTCCCGCAGCGTACTATCACCTTGTTCGTAGGTAGCGATGAACTGCTTCATTTGCTTGATCGTCATTCCACATTGTTTGACGCAGAGAATGAAGTCCATTCTTTCCAAATCAGTAGTGTTGAAGTCCCGGATACCGTTGATGCGGTTAATGGGGCCGATAAGTCCCTGTTGTTCGTAGTAACGAATGGCCGATGTTGAGATGTGGTAACGCTGAGCCACAGTTTCGATTTTCAAAAATGATCACCTTCTTGACTTAAAGTATACTTTAAGTGGTAAGGTTTTCAACAACGGGTAAATCAGC # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGGGTGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.60,-10.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 131643-131793 **** Predicted by CRISPRDetect 2.4 *** >NZ_MZMW01000002.1 Levilactobacillus brevis strain CRL 2013 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 131643 29 96.6 32 ............................C CTTATCAACTGAACCAACTGATACACTAGTGC 131704 29 100.0 32 ............................. ATTTCGAAGTGAGAAGTTTGAGCTTTCCAATG 131765 29 89.7 0 .........................A.GG | ========== ====== ====== ====== ============================= ================================ ================== 3 29 95.4 32 GTATTCCCCACATGTGTGGGGGTGATCCT # Left flank : TGGAACCATATGATGATTTCAATGTGATGGGAGCGGCATTTTGCCAAGCCCATCCGGAGCAGGTCACCCAACAGCCGCTAGGTCAGCACCATCAGGCCAGGGCGATAGGGATGCGGGCGCTGGTCGACTTTGCGCGCGAGTATTATCGAAAAAAAGATCGACGCGAGATGAGCTAAAAAGTACAAGATATAAAAGCGTAGTTGTTAGCCGCGGTGAACGGAGTAGCGGCTACGTTTTATTGTATTATATAGTCTTCTATCCTTTGATTGTATCAAAAGGTAGTCACGATACTTTGGAACAGGCTAGTGATTTGGCGGCCTGGCTACGTAGATTAAGCAACTGGATCGTTACTAGCAATCTAAGTCGAAATTACTTACAAAAGTAAGGCCACAAATTCCGATTGTTAATCAAATATGAGTAGGGTATGCTTTAATAGTCAAAGTGATAAAATTTGCTGTTTTCTCTAAATGAAAATGCTGGTATATCAAGGATTATTTAGT # Right flank : GAGGCGTTTCAAAAATGATTGTAATGCTGCGCTTAAATCAAAATAGACTTTTTATGGAAAGATAATTGATAGAACAGATCACCCAACAGGCGCTGGATCGGTACCAGTAGGCCATGGTGATAGGATGCAGGTGTTGGGCGACTCTGTACGAGGACATTATCGAAAAAAATCGGCGTGAGATGAACTTATCGAGGAGTCTATCGGGTATTCAGGCACGGGGATCGTATGTATAAATGAGGCTAGCTGTTAAGAAATAAAGTGCTGGTGGTTGACAAAGTTAATGGCTCGCGTTATATTAATAATCGAACGATCGATCTTTTAAAAGGAGCCAATCATGCGAGAAAAAGATACGGCAAAACAAACGAGTATTATTGATGAGGTCAGTAATATTATTTTAAACGAGGGAATTGCAGCAGTCTCAATGTCCAAGATTGCTAAAGCAAGTGGCATTTCTTCATCAACGATTTACGTGTACTTTACGGATAAGGAAGATGTGTTAA # Questionable array : NO Score: 3.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACATGTGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //