Array 1 15121-18851 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAESCJ010000002.1 Chryseobacterium sp. Marseille-P9602, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 15121 47 83.0 30 TA..CTT..A.TC.................................. GGCACAACCATGAGCAAAGAATCTATCAAG 15198 47 100.0 30 ............................................... ATAATTCTATTGTTGTGAATGGACTTTCTT 15275 47 100.0 30 ............................................... AAACTTTTAAATGCCCAACAGCGTTTGTGG 15352 47 100.0 30 ............................................... TTTTTCCTTCGTCACCGGTAATTACTAATG 15429 47 100.0 30 ............................................... TTTCTTCAATAAATAAATAAAATGAATACA 15506 47 100.0 30 ............................................... ATCGCAGGGGAATGGTTGATTGAGGAACAA 15583 47 100.0 30 ............................................... ATATTTTTTATAAATGAAATTATCTTTATT 15660 47 100.0 30 ............................................... CGAAATTATTAACAATAATTGCACCTGCCG 15737 47 100.0 30 ............................................... ATGCTTTTCGAAAATATGGCATTGCCGTAT 15814 47 100.0 30 ............................................... AGAACTTTTTCATTCCTGTTTTCGATTTTG 15891 47 100.0 30 ............................................... TTGTTCTTTCAGGAACAGGTTGCATTGTTC 15968 47 100.0 30 ............................................... CGGTACTTTAAATTTGATCAAAGTTGGTGA 16045 47 100.0 30 ............................................... GTGCAAATTTTGTTCTCATTTATTTTACGC 16122 47 100.0 30 ............................................... TTGAAACATCTTGGATGCATCAGTTCAATA 16199 47 100.0 29 ............................................... CATCACATTGGGAATGGACAAGGCTCAAA 16275 47 100.0 30 ............................................... CTAACGATATCTTTTCATAAGCTGACACAT 16352 47 100.0 30 ............................................... ACAATTTCTGTAGAAGAAGTTACTCAAGGT 16429 47 100.0 30 ............................................... GATCCTATACTGGATGAAAATGAGATCTTC 16506 47 100.0 30 ............................................... TAGTCGATTTTAAATGAAAAGGAGCAGGTT 16583 47 100.0 30 ............................................... CCGGACATGATAAACGACGCTTTGTTGAAC 16660 47 100.0 30 ............................................... GCTTTGAAAATGACAAACAAATTCGCACCT 16737 47 100.0 30 ............................................... TTTTATAATAATTTTAAAAACCGCCCTAAC 16814 47 100.0 30 ............................................... GAACAAACCATCAAACAACAGTTGCTTGCA 16891 47 100.0 30 ............................................... TTATTTTAAGTAATATTGAATATAGTTCTT 16968 47 100.0 30 ............................................... AACTTTGGGCATATCCGAGACGTTACATTA 17045 47 100.0 30 ............................................... CAGAAATAAAAACGCCTGCATTCTCAAGTA 17122 47 100.0 30 ............................................... AAAATTGATTAGTATATGAGAACGTTTATA 17199 47 100.0 30 ............................................... TACAGAACAATGAATGTTGTAGATCTGGGA 17276 47 100.0 30 ............................................... TAAATGGAAAGCTGGAGCAATTTATACTTA 17353 47 100.0 30 ............................................... GAATGGATGGGAACTAATTTCAGTGATTTA 17430 47 100.0 30 ............................................... TTTACTTTTGAAAGAATTGCGAAAGAGTTT 17507 47 100.0 30 ............................................... AGTAAAGGAATTGTTTTTAAATCCTTCAGG 17584 47 100.0 30 ............................................... GTTGGGGAACTAAGCCCTGGGAGATCGATA 17661 47 100.0 30 ............................................... GGAACAATTGGACGACGACGTTTGGGCAAT 17738 47 100.0 30 ............................................... TATGGCTTGAAGCATTTGGCAGCCCTGGAA 17815 47 100.0 30 ............................................... CAGTAAAGATCAAACGGTTAGAGTTAGATA 17892 47 100.0 30 ............................................... TAGAGTACGAGGATCATATTAATGCAATCG 17969 47 85.1 19 .....................................TGGCA.TC.. TGGATTGTCAATGAAAAAG Deletion [18035] 18035 47 100.0 30 ............................................... GTTTCAGATAAATATTATTCTGTTGAAATA 18112 47 100.0 30 ............................................... GTGGATCTCGGCATCTCTTTTACTGCAGTA 18189 47 100.0 30 ............................................... AAATCCAGGACATTACCTTCTACCAAAGAA 18266 47 100.0 30 ............................................... CGATCAGAGCAGCGTTCAAAAGTGTTTTAT 18343 47 100.0 30 ............................................... CGAATCAAAAAAAGCTTTGAAGAAGAATGT 18420 47 100.0 30 ............................................... CTTACAAAAAAAGCCGCACTTGAATATTTT 18497 47 100.0 30 ............................................... ATCCTGGGGAATTATATAAACCTTCAGTTA 18574 47 97.9 30 ..........A.................................... GCAATACAAAACATTAAAAGCAATGTTAGA 18651 47 100.0 30 ............................................... AAGTTAGAATTTTTTAGCGCCGACGCGCCC 18728 47 100.0 30 ............................................... CAGAAATTGAAAAAGCTCTAAAGCAAATCT 18805 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 49 47 99.3 30 GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC # Left flank : AAAAATCATTGGTTTATAATGTTTGTTAAAGATACATGAATTCGTACAAGAAATTCTATTTCCTTTAGATTGCAAAGGTTTTTCTAATTTTGTAATTCTCAAAAACAAAATTAATGACAATACACGATTTGATAGGAAGCTATTCTATTCAAGGAAGCAATCAGGTAGAAAGCAATGAAATTACCTACCAGGGAATTCTCACCCTATCTCTAGACGAAAACAACAGAATTATTGCTAAATGGATAATTGATGACCATATTCAAAATGGAACAGGTTTTTATAAGAATGAAATTTTGGTCATCAACTTTAATTACGAAAGTGAAGATGAAATGATTTATAAAGGTGTTGCTGTTTACCGCTGCATCAATAAAAATATACTAGATGGCTTCTGGTCTGAGAAACACGGCAACCCACTCTATCTTGGAATTGAATACTGCGTAAGAATCAATACTTCTGGGTTTTTAAACTGATCTCTTAAATATTCGGAGAAAAAACTTTGA # Right flank : CCTCAAAAGCTAAACCTACTGTTTATCAGTAGGTTTTATTTATTTTTAGAATTTCAAATTTTGCATTTTTGGATGGGATATAAAATTAATTTCTGTCATTTTTTGATTCTTAAAAATCCCATTATTAAAACTAAAATAATTATTACAGCAATCACAAGACTTACACTATTACCTAAGCTTGATATTTCATTTATGAAAGTCATAAGATAAACCAAAGCCAAAAGAAAAATTGGCCATAACCAAAAGATAACGACTATCGCGATTAAAATATATATAAAATACTTCATTTGCGAAAGGCCTAAAATTTTAAAACAGTTCTAATTGTTGGAAAGTTGGTGGCGGTTCTTCTTTGTTTCTGGCAAAAAATATTTCTATATCGCCAAATTGCTTATCGGTAATGCACATAATGGCCACTTTTCCTGCTTTTGGGAGCATAAACTTTACTCTTTTAATATGAACCTCCGCGTTTTCTCGACTTGGACAATGACGAACGTACATTG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //