Array 1 490483-493390 **** Predicted by CRISPRDetect 2.4 *** >NC_017098.1 Spirochaeta africana DSM 8902, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 490483 28 100.0 32 ............................ CGAGACAGGATCGGTCACCCGCTTTTCTGCGA 490543 28 100.0 32 ............................ TGAGCCATGGTGGTAGTATGCGTCCCGGGATG 490603 28 100.0 32 ............................ AACCTTTGGTTGCTCCGATATTGCACGAAATT 490663 28 100.0 32 ............................ CTGTGGTGTCATCTGGCATTATTAACAACAAG 490723 28 100.0 32 ............................ TTTACTCCTGTATTGTCACGCAAGCGATATAC 490783 28 100.0 32 ............................ ACTATCCTCAAGTACGAAAGACAAGAATATTG 490843 28 100.0 32 ............................ GTTGTCGTCGAGGATGCCCCATTTTACTGTAT 490903 28 100.0 32 ............................ TCCTTAGAGTCTATTCCATAACCAGTCCCTAA 490963 28 100.0 32 ............................ TGTCTACGACCGCACCGAGCATAAGCAGCTGG 491023 28 100.0 32 ............................ GTCCGTCAGTCGCTGGCATTCCACGGCATCAA 491083 28 100.0 32 ............................ TACCGATTCGCTCATGCGCTGCAGCACGAGTT 491143 28 100.0 32 ............................ TACTTGCAAACTTGGCCGGACAAGCTGTTAAT 491203 28 100.0 32 ............................ TTGCAGTTCTACCCGCATGTCCTGTAGCTTGG 491263 28 100.0 32 ............................ GGTATGATTGGTCTATGCCTATGGTGTAGCTA 491323 28 100.0 32 ............................ TCCTTCAAAAGTTGCCGGGGAGTTACCCCCGG 491383 28 100.0 32 ............................ ATTCTCGCGCTCGGGCAATGCGGCAAGCAAGG 491443 28 100.0 32 ............................ AGCAGCTCCGACAGGTCAGCATTCTTTCTGAC 491503 28 100.0 32 ............................ ATCTAATACAGCTGCATATTGTGACAACGTGT 491563 28 100.0 32 ............................ TTGCAGAGCTGCTGGTAGAGCGCATGACCGGC 491623 28 100.0 32 ............................ AGTATTGTGGAGCATCCGCGCCTGATGTAGTC 491683 28 100.0 32 ............................ TATCACAACCTTATTCCTCCACGACTAGACCC 491743 28 100.0 32 ............................ TGATACTGGCGCAGAAACATATGAAGTCAATT 491803 28 100.0 32 ............................ TTAGATGGCTGCTCTGTTTCGTGTACTTTTCC 491863 28 100.0 32 ............................ TACGTAATCAGGCGGACATCGGCAGCATACTG 491923 28 100.0 32 ............................ TGTCCTATTTCGGTGAACAACCTCAATCCATT 491983 28 100.0 32 ............................ TTAATGGTCAATCAGTCCTGGTGTTGACTGAA 492043 28 100.0 32 ............................ ATCAGGGCGCGCTTCAAATTCGCGATGTCGGA 492103 28 100.0 32 ............................ ATAATGGCCCTCCCTGTCTTTCCCGCTACTGC 492163 28 100.0 32 ............................ TCCTGCAACAGCTACCCGCAATTCACCCGTCA 492223 28 100.0 32 ............................ TCGTCATTCCATAAGAGCTCCCAAGTTGTGCC 492283 28 100.0 32 ............................ CCGAGGGCATGAGCGTGACCGTGCAGGTAACA 492343 28 100.0 32 ............................ GATATGCCCGAGGACTATCCGTACACCGTGAC 492403 28 100.0 32 ............................ GTAAAGCCATATTTTAAACATGATTCAAAGGT 492463 28 100.0 32 ............................ ATCATGATCATGAATGCATCTTCCGAGTCCTC 492523 28 100.0 32 ............................ CCTGTCAGTTCGTTCTGCCTGATCCATTCATC 492583 28 100.0 32 ............................ AGTTTCGGGTCAACCTCATCTGGTATGTGCAT 492643 28 100.0 32 ............................ TTCCACCAATATACACCCGGCCGACACTTTTG 492703 28 100.0 32 ............................ TTCCACCAATATACACCCGGCCGACACTTTTG 492763 28 100.0 32 ............................ AAAACCGGGTGGAACGGTTACAGCCAGTATTG 492823 28 100.0 32 ............................ ATCATCGCCTTTAATCAAAGCGAATTTAGAAT 492883 28 100.0 32 ............................ TCGGGAAACTCGTTCTGGATTTGCCGCCTGAG 492943 28 100.0 32 ............................ TAAGAATTACTTCATCCGCAAAGTTAGGATTC 493003 28 100.0 32 ............................ GCAAGCGGATTTCATGCAAGCTATAAATCCGG 493063 28 100.0 32 ............................ TGATGGTCGCCGTAGTGGAACAGACCCTGTTC 493123 28 100.0 32 ............................ TGTATCTCTGTGATCATCATTGCTCTGCCCCT 493183 28 100.0 32 ............................ TGTCCTATTTCGGTGAACAACCTCAATCCATT 493243 28 100.0 32 ............................ TGGGTGTTGGGGGCGTCGACCTCGCTGGTTTC 493303 28 100.0 32 ............................ TTGGATTGTTCGCCATAGCCTCGCGCATCCGA 493363 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 49 28 100.0 32 GTTACCTGCCGCATAGGCAGCTTAGAAA # Left flank : GAATCTTTTCCAGCACCAGGGAGACGTTGGAGCAGTTTGACTTGAATGTCGTTCTTCTCCGCTTTTCGGATTATGTAAAGGTGAGTGGCATACGATCAGTACCACAGAACATCAGCTCGTACGTTGCCTATGAACGTGTTCAGAAAAAGCAAAACCCTGACAGAATCGCGAGACGACGTGCCCGAAGAAGCAACCTTGACTATACGGAAGCTCTAAGAGCAGTGGCAGAAAAAAATGCCCCAGTTATTACTCTACCATATGTTCAACTGATTAGTCTGAGCACCAAGAGAAAGTACTCTCTTTTTCTGGCCAAACGCCTTACTGAAGAACCCGGGGGAAATATTTCGTTTAATTCATTTGGCATTAATAAACATTCCACTGTCCCCTCTTTCTGAGGGGATATTTAGTTCTTTTTCAGCACTAGAGAAGGAATAGATGGTAAAAATCTCAATCTCTTGCTATGTTATTACTGTTAAGTGTTTTAACGGAGCAGTTATACC # Right flank : AATGTGCTGCGCAGTCGTGTGTTCGAGCGTTTCGTACAGCGCACAATGGCATTCTTCCAGAAGCATCCGGAGTTGTCCGACCGGCATCCGGCCGGCAGCGAGGTTGCGGCGTATGCGTGGCAAGGTGCATTGTTCGGTGTACTCGACTGGATCATGGCGCACTCAGATCTGACTGACAGGGAGATCTCGGAGACAGTGCGGTTCGCAGTGTCATGGAACCTAAATGCGCTTACCGCACGCACTGAATAGCACCAGCTATATCTGGTCGTTCGGTGCCTCAATAGAAAACGTTTCCATCTCGGCAATGTCCTGAAGTGCTTGGTTTACTCGGGGGTAACACCCGAAGTAGAACTGCAATCCTTGTTGCACTATTTCAATCTCTCCAGCCGTCCTTTGCGCTTGACCAGGTTCTTGTAATCCCACTGGATGTCCCGAGCCTTTTCCAGCCATCTGTGCAGATCGGCTGTGTTTACCTCTGCAGCGTCAGTATAGAATATCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACCTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTACCTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //