Array 1 182396-181356 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJVQH010000001.1 Pseudomonas fluorescens isolate PS861, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================================================================================================================== ================== 182395 28 100.0 33 ............................ CAGCTCGCGGCGCCAGTCCCCTTCCGGGCAGTC 182334 28 92.9 33 .............GG............. TGACGGCGCGGTCCTCGATGTCGACGACGAGCT 182273 28 100.0 33 ............................ CTTGTAGAGGAACTCGCCGGTCGACTCCCGGTA 182212 28 100.0 33 ............................ CATGCGGTTTTTGACGCCCTGGCTAGTCGAGGC 182151 28 100.0 33 ............................ TTCCAGCATTGCGAGCCGCAAGATTACGCGAGC 182090 28 96.4 33 ...........A................ TGCCTCAAGCTCCAGGTCAGGGCGCAGGTTGAT 182029 28 100.0 33 ............................ CCCCGAAGAAATGCTTCTCAAGGCGCAGCTGGT 181968 28 100.0 33 ............................ CTTCCCAGCGTTCCGCAAGCTGGCCATCGAGTG 181907 28 100.0 33 ............................ TCAGTGGAACCTTGCGGCCTACGGCAACGCGCC 181846 28 100.0 33 ............................ CGACGACACCGGATTCTATTGGGTCGTCACGGG 181785 28 100.0 33 ............................ CTTCCAAGAAAAATTTGTGGTCGATGGCATGGT 181724 28 96.4 131 ...........A................ CTCTTTCGAATCCAGTCCTCGAGTGATGGTGATGTCTTCTACACCTCACCTCCCAGCAGCGTGGCGATCTGGGCCTTTCCCACACCCGAGGTTGATTCCGACTCAAGTGGACGCTTGCAGACCACACGCGG 181565 27 71.4 33 A.....TT.....C.A..CA..-..... TTACCACTTGCTTCAGTGGCATGATAAATCCCT 181505 28 92.9 33 .............CT............. CCCATTGTTCTAGGAGTCACTGTAATTCCTCCC 181444 28 96.4 33 .............C.............. CTACACGCAGATCTGGGTCAAAGAGGTGCAAGT 181383 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ =================================================================================================================================== ================== 16 28 96.7 40 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TATATAAAGAAAACCTGTGCATTGATCTGGCCTTTGCTCTGACCCGGGACATGGCTGGGCGCTATGACAAACACAACGTCTCCGATGCCTTTCGTCAGCGTGTGATCTGTACGGATCTACTTGCGAAACTGGCCGATGACATTCCAGATGTTCTAGGAGTAAGTCATGCTCGTAGTCGTCGCTAATGACCTGCCGCCCGCCGTGCGTGGGAGGATGAAGTTCTGGTTTGTAGAGCCGCGACCAAATGTATTCGTTTCGGGTATCAAAGACTCCGTTGCAGCAACGGTCGTAGACTATCTCTACAAATACTGCCCGCCCAACTCGGGCCTGCTTATATTTAAATCTATCCCCCGTTCGCCTGGGTTTGAAATGATATGTATTGGCCCACTACGCAAAACGCCGATCACAATATCTGGAATGCAACTGATAGTGGAAACCCTGAAAGCGAACTAACTTACACATCTAGTGTGAATGTGATCGTTCTTTAACAAAATATTTGG # Right flank : TACCTATTGTACTGGTCAACTAATCTCGAACACGTAGTGCACTGTTTTGGGAAAAAATGGAGTAAGAGCGCAGCCAGTCTCTATCCTAAACAGCGTAATTCCTGTAGTGGCTAATGTGGTTCCCACAGCGAGCGGCGGCTTATGAGTGTCTCCTTCTGGCCGATTGTGTTGAAAAAGTCGGGTTTTCAACTCGCCTGAACTCAGGCACGGCCACCATCGGAGAACCTACTCACCACATTGCGTGGTTTTTCGGCCCTTCGTTGACCATTGCCGCTCTGTTAGTGGGTTAGTTTTAGGTTTTTTGCTTCGTGCAGGCGCACCTATCCCGTGAGCGGTGGCCCTTGAGAGGTAAATTTTGCCAGCCGTCGTAGGTTCTGTACCGCAGCGGCCAGCGTGAACTCGTCGGTCGCACCACTCATGCCACGTAGCCGCAAGCGATCCAATTTCAGGATGCGCTTGAGGTGGGCAAACAACATTTCAACCTTTTTGCGTTCGTGGCG # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:-0.58, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //