Array 1 44-339 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF238858.1 Moorella thermoacetica Y72, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 44 30 100.0 35 .............................. ACGTCATCCTCCTGACTCGGCTCTCGGCCTTACGA 109 30 100.0 37 .............................. CGCGGCAGGGAGTTAGTCCTGCTAGTTATCATGTTAT 176 30 100.0 37 .............................. TTGTCTCGCTTCTGCGGTTGGCCTCGCCTTGCATGAG 243 30 100.0 37 .............................. AGCCCGAGTGACTTGCTAATATCTTCCGACCACTTGC 310 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 100.0 37 GTTTGAAGCCTACCTATGAGGGATGGAAAC # Left flank : TGGAAACCCCCTCGTGTCCCGCTAAATAGCGGGCGATTGGCAGG # Right flank : AAGGTAAGTTTGACTTAATG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAAGCCTACCTATGAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [28.3-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 1522807-1528811 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF238840.1 Moorella thermoacetica Y72, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 1522807 30 100.0 36 .............................. GAGTACCATAATGCTGTCTGGTTCAGGCCTATTGGA 1522873 30 100.0 34 .............................. TCCTCCCTCCGTTTTCTCCTACCGCCCCCGGGTG 1522937 30 100.0 38 .............................. ATATCTGGACTGTGAAAGCCTCTATGCCCACGGCGAGG 1523005 30 100.0 36 .............................. TATCCTCCTACAGCATAGAGCTTGCCATTGCCTGGA 1523071 30 100.0 36 .............................. AAGGGATATACCGGTTTGACGATACCTTGCGACAGG 1523137 30 100.0 37 .............................. CGACGCCATAGACATCATGGAGTATTGCGATATAGAG 1523204 30 100.0 36 .............................. TCGGCCTGACTGCCGTGACCCAGGCTACGTGCCCAA 1523270 30 100.0 35 .............................. CGGTCATCGTCTATAATACCGGCTTTTTGTAAAAT 1523335 30 100.0 36 .............................. CGGTATCAAGGCCGCCTATATGGTCCTCATGGGGAT 1523401 30 100.0 35 .............................. TATGGCCGTGACCGGCGCTGAAAAGTGGTATCTAG 1523466 30 100.0 37 .............................. TATCCTCGAAGAAGGCAAACTCTACGAAGTAAATGCC 1523533 30 100.0 36 .............................. AAGGAAACCTTTGCTTATCGGGCCGCAGAACGGGTG 1523599 30 100.0 35 .............................. TCCAGCCGAAAAAAGCGAAAAAGAAGAAGGCAGAA 1523664 30 100.0 36 .............................. AAATCACCTACTTAGAGTTTATCACTATGTACCTGC 1523730 30 100.0 36 .............................. CTGGGTGGCTCTGCCTATCATCTTGCGCAATGCTGG 1523796 30 100.0 36 .............................. TGAGGTAGAAGTCCATATGGCAATCACTCCGAAGCG 1523862 30 100.0 37 .............................. CAATTCAGCACGCTAGGCCAGTACGGTGCAAGCCCGG 1523929 30 100.0 36 .............................. CGGGTAACCGTCCAGGTGGTATTAGTAGTACTTACC 1523995 30 100.0 37 .............................. AACAATGCGAATAGCAATCTGCGGCGCCCACGGCGTA 1524062 30 100.0 38 .............................. ACCCCCTGCCGCGTCGAATTATACCGCAAAGGTCGAAC 1524130 30 100.0 38 .............................. ACCCCTAATTTTTTGGAAAAAGGAGGTTGAGTTGGGAG 1524198 30 100.0 39 .............................. ATTTCATGAATCTCTCTATCAAACGGCGATATCTCCCAG 1524267 30 100.0 36 .............................. TAGTTTTATCGCGCCGGCGAGGAATCACCGTGAACA 1524333 30 100.0 35 .............................. TTCCGGGCATACTCAATAGCGTTCTTTTTGACCTC 1524398 30 100.0 36 .............................. CGTTATCCTTTGTGAGTGCAACCAGTCCGGCTTGAA 1524464 30 100.0 38 .............................. CTGGTCGCATAGGGTTTCCTGATTATGCGCTAAAAAAG 1524532 30 100.0 36 .............................. CTCCTTTGCTCACCGGACTGTCGGTGGCTTCACGAT 1524598 30 100.0 36 .............................. TAAGCCCTCGCAACTACAACCGCACTTTTCAGCGTC 1524664 30 100.0 37 .............................. CCGCCTCGGCGGGGGCGGATCCGGCAATATCCAGTAC 1524731 30 100.0 37 .............................. AATACTGACGCCCCGGCTCAGGATCCGCCGCCTCTTG 1524798 30 100.0 36 .............................. CCCGATTTCGCGGCGCTTGGTCGATACCGTTGTTGA 1524864 30 100.0 37 .............................. AGGAGGTACTTGCAATGCTTACCAATATCCAAATTTG 1524931 30 100.0 36 .............................. GAGTTCCCAATTCCCAGCGTCCAGGGGTTATGGATC 1524997 30 100.0 37 .............................. AAAGAATTACGCCAGCAAAAGGGATTATCGTTAAGAG 1525064 30 100.0 37 .............................. ATTGATCAGGCCCATCATAGCGTAATAAGCCGCCAAA 1525131 30 100.0 36 .............................. CCTGGCCTATTTCCGGCTGTTAAATGGCTTTGAAAA 1525197 30 100.0 41 .............................. TCCTTTACGGCAACACAACCTTCTTGTTGGCCGCATCGTAG 1525268 30 100.0 36 .............................. CGGTGGTCATCAATCTCTTTTTTGCTCATGTAGTGG 1525334 30 100.0 36 .............................. CTCCATAGCCAAGGCGCGCGCTATGTTTCGTTCCCG 1525400 30 100.0 36 .............................. CACTGGCAGCCGGTGTAATATCTAGGGCATCCAGGT 1525466 30 100.0 36 .............................. GCGACTCCCGTTCCCGCGTCGCTCTCCCTCCCCGTA 1525532 30 100.0 36 .............................. CGATATCCCTGTCATCCTTGTAAGCAATAGAATTTA 1525598 30 100.0 35 .............................. CGGACATGGCAAAGGTAGCAACCTATACCGGCCTG 1525663 30 100.0 36 .............................. CCTCCTGGCTCGTCATTTCTTCCCTCCACGGGCACC 1525729 30 100.0 36 .............................. TGTGGGTCCCACCCCGGCGTAATGACTTCATACACC 1525795 30 100.0 36 .............................. TAGCGTTCCGTTATGCGGAGCAGGTCTTCCTCGACC 1525861 30 100.0 36 .............................. ACGAGGTAGAAGGGCGCCCCTACCTGCAAGTCGTAA 1525927 30 100.0 37 .............................. TCTAGTACGGACGCCGGAGCAGGTCGAGGAAGACCTG 1525994 30 100.0 36 .............................. TTAAATTCCTTTCCGACTAGTAAACGAGCAGTAAAC 1526060 30 100.0 36 .............................. GGGCAGATGAGAAGGCGGAGAAAAAGAGCCAGCAGA 1526126 30 100.0 35 .............................. AATGTTGGTAGAATGGGGACTGATAGTTGCCGGTG 1526191 30 100.0 35 .............................. CGTTTTTTCTCTATTAGGAAGCGGGCAAAATCAAG 1526256 30 100.0 36 .............................. TTCGCCAGCATGATAGGGATCGCGGCCTTATTCAGC 1526322 30 100.0 36 .............................. TCGCTATCTCACACCAGTTGCGAAATTGTAAGCGGG 1526388 30 100.0 37 .............................. AACTATAGACTTCTCCAATTCTGCACCCGGTAGAATA 1526455 30 100.0 37 .............................. TATTTTGGGAGGGGAGAACATGGGTTTCCAATTCGTG 1526522 30 100.0 36 .............................. AAGATATCTGAGTGCTTATATAACGCCGCCTAGCCA 1526588 30 100.0 36 .............................. ATGGAACGGTTATTGTAGACATTGAAGCCGTGGAAG 1526654 30 100.0 37 .............................. CTTTGATAGTTTGCGCCAATTGGGACAGCGCAGTGCA 1526721 30 100.0 36 .............................. ACGGCGAAAGTGCCAAGATAGATATGACTTCCGGCA 1526787 30 100.0 37 .............................. TACTGGTCAGCATGAAGCTATTATTGATGTAGATACA 1526854 30 100.0 36 .............................. TTACTGGAGGTGGTCATAATGCTACAGGCAACTCAA 1526920 30 100.0 35 .............................. ACCTATGATCCAAGTCCATATCGCCAACTATATCA 1526985 30 100.0 36 .............................. ATATCAGCAGCCGCGATACCTGGAATCAGATTCTGG 1527051 30 100.0 37 .............................. TTCCCTTAAATAACTTGATCTAAAGGAGGCTTAAATC 1527118 30 100.0 35 .............................. CCAATCCATCACGCCATTTGACCCATGCCAGACGA 1527183 30 100.0 39 .............................. TCGTTGTCCAAGCAAATCTCGCTATTGGTGCGATTGCGA 1527252 30 100.0 36 .............................. TTCATCATTTCTTTGCCGTGGGTAGAAGTGATCACG 1527318 30 100.0 37 .............................. AGAATGTACTCGCCGAGAATGCGGGTGCCTTCGTGGC 1527385 30 100.0 36 .............................. CCGACATTTTGTACCCTTTCCTCGAAAGCCTTATAT 1527451 30 100.0 38 .............................. GAGTGCCGGCAGGGCTTTGGGATGGCGGGGCATTTCCA 1527519 30 100.0 38 .............................. CTTCGCAAACATGCTCCACAAACAATGAGGTCTGCCCC 1527587 30 100.0 36 .............................. TGAGCAGGCTTGCCTGTGGGCTCTGAAAAAGTACAC 1527653 30 100.0 36 .............................. TACCATGTTTCCAGGTCTGGCTGCGAAGCAGGATCT 1527719 30 100.0 39 .............................. ACAGACGAAATTAAAAATGACGGCCATGGCCGGTTAGCG 1527788 30 100.0 37 .............................. TCCCCTCCCTCTGGCAAAATCTCTGCATTGCAAATCG 1527855 30 100.0 36 .............................. CTCGTTGCGATATACTTTCTCGTTCAAATTGAGCAA 1527921 30 100.0 37 .............................. CGGGAGAGCTACGCCCTTTACGGTCCAAAAATAAACA 1527988 30 100.0 36 .............................. TATCAGAAACAGTACTGCCGTCGTACTTCTTTGGTA 1528054 30 100.0 37 .............................. TGAGTGTTCCGAGTTCGATAAATTGGTATTCAATTCC 1528121 30 100.0 36 .............................. CCTGCGCATCCAGCGATTCCAGAACGGCCTGCACGG 1528187 30 100.0 36 .............................. GAGCAAGGGCTAATGGTACATTCACCCCGCCAGCAG 1528253 30 100.0 35 .............................. TCGTAGTTAATCAATCAAACCTCGTTCGATTAAGT 1528318 30 100.0 35 .............................. GAAATTCCTCAGCTTCCTTGGCCTCTTTCCATAAT 1528383 30 100.0 35 .............................. GTTTCTTGGGGGAGGAAAAGACGTAAATGCCGGAA 1528448 30 100.0 36 .............................. TGCCTTTGCGGATTACCTCAAAAACTTCGTAGTGCG 1528514 30 100.0 36 .............................. TAGCCAGCACCGCATCCAGGAGTGCGGGCTGGCCAG 1528580 30 100.0 37 .............................. TAACACCTCCTTAGTTAGTTACGGGCAATGCCCACAA 1528647 30 100.0 37 .............................. ACAGATCAGGATAATAATACTCCAGCCACTTAAACCG 1528714 30 100.0 38 .............................. TCGACGCGGCCGGTATAGGGCATGTCCATCACCTCAGC 1528782 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 91 30 100.0 36 GTTTGAAGCCTACCTATGAGGGATGGAAAC # Left flank : GGGGCTAAAAATAGCCAGGGGTTTGGTATGCTGGAATGTATTTAGTATAGTATAAAGGGACATTTATCCTGGAAATCTGAATGGAAACGCAGGTGTTGCCAGGAAATACTGCTGGAAAATGCTCAAAAGATTTGATCCGCGTTATACCTGCACCAGAGCAATCTGGGAGGCCGATATTCACCACCGCACCCTTAAACGGTGGAAGAAGCGCCTGGAGAACGCGGAGGGGGACTTAAACGCTTTACGGGACCAGTCCCGTCGCCCTACCATATCATGTACAATTTTAGCCCAGAGGTAAAACAGGCGGTCATCAACTAGATAACAATGATATGTTTGGAGTGGGCTTTTTAAAGCTTCTGTCGTCGATAACCAGTAGTGTAAAAATCCCTGAGGATCGACAACAGGAGATTCTAAGAATGAGGCCTTTTTCTTGCCGAGTGGATTGAAGATGATATAATAGTGGGTGAGAAAAAGGTTAATATTTTCAACCACCTAACGGG # Right flank : CATGCTTCTCTGGTAACGTTTCTAGCGGACGACTGGTTGGTTTGAAGCCTACCTATGAGGGATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAAGCCTACCTATGAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //