Array 1 858203-858375 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020384.1 Rhodovulum sp. MB263 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================= ================== 858203 37 100.0 29 ..................................... AGGAAAGCGGTTACTTTATAAGGGGAAGA 858269 37 100.0 33 ..................................... CTGTTAAGGAACGAACCATGTTTGGAATGTCGC 858339 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================= ================== 3 37 100.0 32 GTCTCAGGCGGTCGTCAGAAAGACCGTCATGCAGAAC # Left flank : GCAGCCACTGGTCCCGCACGGCATCGGGCAAAGACACCCCGGACAGCCTTGCCGCGAGAAACAGCACCCCCGTCACACTGTCGGGGCTGGCATCCTCCACCTTCCACGAGCAGCCGCGGACAAGGTCCGCGAGAGAGGCGAAGTGAGCCAGTTCAGCGCCATGCAGCGGCAGGTTCTCGTTCAGGACCATCGCGATCACGCTGGACTGACGGACGCCCAGAACATTGCGCTCGGATGCCTTGACAAGCGATATGCCCGCCGCCGCCGACTGTGTGTCGACGATCAGGCCGGGCCGGTCATCCTGAACGAAGGCCGGGGAAAGATCGACGCCCGCTACCGCGGCAAGGAAATCCTCGAATGCCTGCATGATATTCCAGTCCCCTTGAGGCGCGCTCTCCGGATGCTGCGAAGACCGGCCTCGGCCGTCAATACCTGACCGCTTCGGAAAGGACGGCCAATGGCCTCCAGCGCTGGTGATAAGCGCGAAGGCTGTGAGTCGG # Right flank : CCTGATCTCCGCAGCCCCTTGCTTTTCAACAAGGAAGGCGGCGGCGATCTGAAGCAAATCCCGTCCTGGCGCATTTTCAGCCTCGGTTCCGGGCTTGACTGGCGTGATCTCCGTATTTTTTCTTTCTCAATCGGAGATTTGCTCTTTTTCTGAGGTAAAAACAAGCCTCGTCTCCTTTTTCAGGGTCTCCGGCGTCTGCGGAAAACGGGCCGTGAACGCATCCGGATAGACCGCTTGTTTGACCGTCTTCCCCGCCAGGACAACCTCGTCCCCGTAGCCAGACCCGCCGAAGTCGAACATGGCCCGCGTCATCGAGACCAGCCGCACCGATGCCCTCGGCAGGGTGAAGCTGACGGGCGCGGACATCATATGCGGCGGGACCATGGTCAGGTGCGTTTCCACATCGGGATAGATCGTCGGCTTCTTCAACCGGTCGTCCTTCATCTGCCATTCGATGATCAGCCCTTCCTCGCCGAGGATCCGCTTGATCGATTTCGGGA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGCGGTCGTCAGAAAGACCGTCATGCAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.60,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [38.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 2 1637553-1639350 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020384.1 Rhodovulum sp. MB263 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1637553 29 100.0 32 ............................. TGTCCATCGTCAGCATCGGCGCCAATGATAAC 1637614 29 100.0 32 ............................. GCGCAGCTTGGCGAAATCGAGCAGAAGATCGC 1637675 29 100.0 32 ............................. ACGTGACCGACAAGGTTACCGGCGCGCTGCTG 1637736 29 100.0 32 ............................. CTCTGCCAGGGGCCCCAGACAGGATCGCCCTC 1637797 29 100.0 32 ............................. TCGGTCAGCCCGCCGATCAGCCAGTTCAGGAT 1637858 29 100.0 32 ............................. CAATAGATGGCCACATTCGCGCCCGAGGATTT 1637919 29 100.0 32 ............................. AAGTTCGTGGAGTTTCACCGGGGCGAGATTGT 1637980 29 100.0 32 ............................. AGGCTCATGCGGCACCGCCTGCCCGGGCCTGG 1638041 29 100.0 32 ............................. GCCATTGGCAGGTTTGACCGCGTCAATCGGGC 1638102 29 100.0 32 ............................. TTCCCCCTCTACTACCTGCCCGAGGACCAGGA 1638163 29 100.0 32 ............................. AATGACAGACGACCCGCTGGACCGCGTCCGCG 1638224 29 100.0 32 ............................. ATCCAGCCGGTCACCACGGGGCTGATCCTCTA 1638285 29 100.0 32 ............................. ACAATTTTGACGCGGCGCCTCAACCCACCAGT 1638346 29 100.0 32 ............................. GTGAACGAGCACAAGAAGGAGATCACCGACAT 1638407 29 100.0 32 ............................. CTTGAGGCCAATGGCGTGGCCGATGCGATGAT 1638468 29 100.0 32 ............................. GTGAAGAAGAAGACGAAGGATCTGGCCGATAC 1638529 29 100.0 32 ............................. CCGTTGCTAGCCCGCGCTGCCTTCGCCCGGGC 1638590 29 100.0 32 ............................. CCGTAAGCCGTGGAGGCCTCGGCCGATAGGGC 1638651 29 100.0 32 ............................. GTGAAGACCAAGGATGAGATCACGCTGAACAA 1638712 29 100.0 32 ............................. ACGACCTGGACGATGACACGATCCTGGCGCTG 1638773 29 96.6 32 ........T.................... CTGTCTGCGATGTTCGATTTCGACACGAACCT 1638834 29 100.0 32 ............................. ACGAAAAGACGGTGGAGAACAGCAGGCGGCTC 1638895 29 100.0 32 ............................. GCGCCGCCGGTCGCGCCGGGATCGATGACCCG 1638956 29 100.0 32 ............................. ATCCCCCGCGCGATGCTGAGGGCCGTCAGCAC 1639017 29 100.0 32 ............................. TAGTTCCGGTAGCTCTTGCGGCGTCTATTTGG 1639078 29 100.0 32 ............................. CTCTGCAATTCATCCTGAAAGCCGCCCTCGCG 1639139 29 100.0 32 ............................. CCCTGAAGCGTCACATCCCGCGTGATGTCCCA 1639200 29 100.0 32 ............................. GGACTGGGTCAGCGGTCATTATGCCTTCCTCG 1639261 29 100.0 32 ............................. CAGTCCATTTTGCCTGATGGGTGGTCTTACAC 1639322 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 30 29 99.9 32 CTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CCGGCCTGCTAAAGAGGATCATTCCTGCCATCGAGGAGGTTCTCTCGGCCGGAAACCTTCCTCGTCCCGAGCCGCCGCCCGAGGCCGTTTCTCCCGCTTTTCCCGATGCGCCGCCGACGGGCGATGCCGGCCACCGATAGTCTATGTTGGTTGTTGTCGTCTCCAACGCCCCACCGCGCCTTCGGGGCAGGCTGTCTGCCTGGTTGGTCGAGGTGCGCGCAGGGGTTTATGTCGGCGACTATTCGGCCCGGACGCGCGAGATGATCTGGGAACAGGTTCTGGCCGGGCTTGATAAGGGGGATGCCGTCATGGTTTGGAAGGCACCGACCGATCAGGGCTACGATTTCGTGACGGCAGGCCAGAACCGCAGGATGCCGGTGGATTTCGACGGATTGAAATTGGTCAGTTTCTTCCCCGAGCCACCAAGCCGATAGGCGGAAGAGGATGGTAGGCTCTTTGACATCGTGAAAATTTTTTTAGATCAACGGTTTGCAGTAAGA # Right flank : GCCTGCGACCTACACCACGGGCAACCTAGCCGGCTGTTCCGTAAGCGTTACAAAGGGCCACCTAATTGGTCTATTCCACGCTCTCCTTAGGCACCTTATATTGGCGTACGCCAATACGGGAGCCCGAGAATCGGTTGTGATCGGCCAAAATGGCCGTCCACGAGCATCGCGCTCTGTGTCCGCTTCGCGCCTCCATGTCGGTCGTTGGAGGGCTGACGGCGATCGCCTAAACGTGGAATCGGAATAAGCCGCGGGTGCGTCGCCACAATCTCTGAGAGTCATGCCTGAGATGACATGAGCCATCTCTCAGCCAGATTTCAGAAGAATGCAGACGTCGTCGTCTGGCGTCATGATCGTGGTGCGCAATTTGGCCCTGGTAACGCTTACACGAAAATTCTGGCGAGCCTGGGAAAGGTCGCCGCCTCCCTTGTTCTCGCGGACGATCCGATCCGGGTTCGCCTTGACCTCCCCGCCGACCCGCACCGGCCATCCTTCGAAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //