Array 1 42933-43693 **** Predicted by CRISPRDetect 2.4 *** >NZ_WSVZ01000039.1 Escherichia coli strain OM15c NODE_39_length_43858_cov_1.967414, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 42933 29 100.0 32 ............................. GGGACCGCCGTAGATGAAATTAAATCATTCAG 42994 29 100.0 32 ............................. CCCTTCTCTGACAGGTTTGCGGGCCTGTACCC 43055 29 100.0 32 ............................. ATCACCTTCGGCGCTTACGTCGCCGTCCGTGT 43116 29 100.0 32 ............................. GGGTATATCTTGTACGCGACTGATCCTGATTT 43177 29 100.0 32 ............................. GTTTTGGCGATATCACCTGATGCCTGCAATCC 43238 29 100.0 32 ............................. GGGTATCGCACTGCGGCAGATGTTCCGGGGCC 43299 29 100.0 32 ............................. CATGAATATGGACGATGAAAAAATAAGAGAGG 43360 29 100.0 32 ............................. TTAAAACATTTTCCGAGCTTTGCGATTTATAT 43421 29 100.0 32 ............................. GCGATCTCGCGGAATACACCGACGAGGCGGGC 43482 29 100.0 32 ............................. TAAGGCCGTCGCCGGATCAGCCTGGCTATGCC 43543 29 93.1 32 .A.C......................... TTCTTGCGGGTGTTGCAAATATTCTTCACGTA 43604 29 93.1 32 .A.C......................... GACGCCGCCGCCGCGAAGCCGTTTCCGATGTT 43665 29 93.1 0 .A..........................A | ========== ====== ====== ====== ============================= ================================ ================== 13 29 98.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 96361-94624 **** Predicted by CRISPRDetect 2.4 *** >NZ_WSVZ01000011.1 Escherichia coli strain OM15c NODE_11_length_105012_cov_2.102655, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 96360 29 100.0 32 ............................. ACATACTTTGCAGGCGATCGGCAGCTCTGGAA 96299 29 100.0 32 ............................. TTCAGGAAACCGGCGACAGCTCAGCTGATAAT 96238 29 100.0 32 ............................. CCTCTGCCGCACTGGCTCCTGACAGCCTCAGC 96177 29 100.0 32 ............................. AATTTTGGCAGCGTGTAAAATCCACTTTTCAG 96116 29 100.0 32 ............................. ACGACGACGGCAGCGCAGCAAACTGGCACGGG 96055 29 100.0 32 ............................. TAACGGCGAGGGAGTGAGCGAGGTATTTATTA 95994 29 100.0 32 ............................. TTACAGCGCGTTGCGAAACGCTGCGGCGATGT 95933 29 100.0 32 ............................. CAAATATATTTTGCGTTAATTATTCGAGGTAA 95872 29 100.0 32 ............................. GCAAAATATTCAATCACCCCACTGGGTAAACC 95811 29 100.0 32 ............................. GAATACCGATTCATAACGGCGGAAATGTGGAT 95750 29 100.0 32 ............................. TGGTTTGAGCCGTTTAAAGTTGAACAGGCGAC 95689 29 100.0 32 ............................. GCTTTCAGTCGAGTGGCAGCTACGAGGAATCG 95628 29 100.0 32 ............................. GACACGGATAACAGCTACCTGCAAAATTTAAT 95567 29 100.0 32 ............................. GCCCAGAATCTCTTTTAGCGCAACGATATTCC 95506 29 100.0 32 ............................. GCTCCGGTTTTAAAATAAACCCGGCAAAAACG 95445 29 100.0 32 ............................. TTAACGCGAAAGCGTCGGCGGTCAGTCGGCAG 95384 29 100.0 32 ............................. GAATATCGGGTGCCAGCCTGGACGCTGGCCGA 95323 29 100.0 32 ............................. ACGCGAATCGGCGGTTTTGAGCGGGTAGCAAA 95262 29 100.0 32 ............................. GCAAACAGCTAACCACCGCCGGGGCGGTTTCC 95201 29 100.0 32 ............................. CGATGATGTAATAATTAGAGCAGAATCCAGTT 95140 29 100.0 32 ............................. CAAAATTTAAAATCATTTAAGCTTGTAAAACC 95079 29 100.0 32 ............................. GGTACACGGATATTCTGTCTAAAAGTTAACTA 95018 29 100.0 32 ............................. ACTGATAACGCCGGAGCCTTCTTTTTCAGCAA 94957 29 100.0 32 ............................. AGGTTGACGTTGATTTTGTTCGTTATGTTGCC 94896 29 100.0 32 ............................. GCGTCTCGAGCGCGGGACGATTCAAAACCAGC 94835 29 100.0 32 ............................. CCAAAGAAGAACAACGAGCCAACTGGTTTCAG 94774 29 100.0 32 ............................. GCAATTTGTTGTCCGCGATCCGGTACGCGCGT 94713 29 100.0 32 ............................. CGGCTATGGAATTTATGGAGAAGTTTGGTTTT 94652 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 29 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGCGGTCATCGAGGACGCGGCTGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCAGGTTGTGGAAATGTGGTCATGGCCTGGGCGACAAATACTGAGTCTGGTTTTGAGTTTCAGACCTGGGGCAAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT # Right flank : GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //