Array 1 238819-237920 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG704699.1 Limosilactobacillus fermentum 28-3-CHN supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 238818 36 100.0 32 .................................... AAAGGCCCGCAGCAGCATCGTCACTTCCGGCT 238750 36 100.0 30 .................................... TATCAACCCCTTTTTATTACTAATTGTCCA 238684 36 100.0 31 .................................... TTCTGGTGCATACTTTATGTGGACAATTAAG 238617 36 100.0 30 .................................... CAGAAACCATACGGTGTAAAACACCATGCA 238551 36 100.0 30 .................................... CGCGTTACCGTTCGTATCAATCACAAAGAT 238485 36 100.0 30 .................................... TTCAGCAAGGTGAAGGTGTGATGAGCGCCT 238419 36 100.0 30 .................................... GCAATTGAACCATTTCGGATTTTGCATCCA 238353 36 100.0 30 .................................... AAAAGGCGGGAATACCCCGCCCGATCGTTT 238287 36 100.0 30 .................................... ACCATTTGTCGAAACGTGACCTTTACTTCC 238221 36 100.0 31 .................................... AAAATGAAATAGAGATTGTCAAACTTCTTTC 238154 36 100.0 30 .................................... TAGTTGTTGTACAGTTCTTCAGTCGTCGTG 238088 36 100.0 30 .................................... TAGTTCATTGATGGTCGGTTCCTCCTTTAG 238022 36 100.0 30 .................................... CACAAATCAAGCAACCAAATCTAGATGCTT 237956 36 88.9 0 ............................TT....TA | A [237924] ========== ====== ====== ====== ==================================== ================================ ================== 14 36 99.2 30 GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC # Left flank : TAATCCAACCAAGCTTGATAGTTACCAAACGGCACTTGATAAGATGATTGTTAAAAATCTTAGCATTCAGAAGCGAGATCGGATGAATGACCTCGCTCGTGGGGTGTTCTCAGAGATGCAAGATTCTTTGTTTGAATTTGATTTGCCCTTGGAAGTCAGGTATGACGAGAGTCTCTTGAGATTATACAAATATGCGAAAATTAAATATTTGACGCAAGTAATAAGGCAACCTTATGGTATAATTGAAACCGATCTAAAATTACATCTCGAATTAAAAGACTGTCAGGTTCTTGGGTATTGTAATGTCGCAAATTACTTATTGCCTGAGCAGATACAGGAATTCGCTACTCTTGTTGAGAAAACCGAATTGGCAGTTTTATTAGTAGAATTCTCAGAAAAGAGAGAAACTCTACAACAACTCAAACAGGATATTTACCGGATTGATCGGGACTTCGTGGACTGGCACGAATAGACCGTTAGTTTTTGATGATAAAACAACG # Right flank : TAGACTAAGGGCGTTGCTGTTTTTAGCAATGCCCTTTTTGAAGTGATGAGGGAAAGGAAAATGTCTTCACGTTGGTAATCTAACGGGAACTTTGGTGGGCGATGTGCTAGGATAGGGCCAAAATGATTGGAAGTGTTTGCCATGCAAATTGATCCCGAAATGATTCGCCCCGAACTGCGCCGGATCGGCAAGGTGGGGTACGCTGTTAACCTGTTGGCCAGCCCCGTACGCCTGCAACGAATGGGACGGATGATGGCGAAGGCGAAAAGGCCCATTCACTCGCGGCGGGTGATCAAACAAGACGTTTGGATTGAACGCCCTGACCACAGCAAGCTTCGGTTGGCCATTTTCCGGGCCAAACAAGTCGTGACCAAGCGCCCGGCCACCGGGATCCTCTGGTTGCACGGGGGAGGCTATGCCTTGGAAAGCGCCGAAAATACATTGGTTTATGCTGAACAATTGGTGGCAGACGGGCGGTCCGTGATGGTGGCGCCGGATTA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //