Array 1 1785-446 **** Predicted by CRISPRDetect 2.4 *** >NZ_JSVI01000107.1 Weizmannia coagulans P38 Contig111, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1784 30 100.0 36 .............................. TAGAATCTTGGGACTATGTGCTTCAAATGGCTGTTT 1718 30 100.0 35 .............................. TGATCATTCGTAATTGTGTAATGCCAACCTATCGC 1653 30 100.0 36 .............................. TGGTGGCGATCTTGTGGACGGGGACGAGCCAAAAAA 1587 30 100.0 35 .............................. AGCTGGACGAAATGCACACTTACTTTTAGTTGTAG 1522 30 100.0 36 .............................. TACCGTAAAGCAAAAAGGCTTTACAGTTGATCACGC 1456 30 100.0 35 .............................. ATCCACGCCCCCAAGTAGGGAGCGACACGCTAGCA 1391 30 100.0 33 .............................. ACAATAAAAGAAAATGATCCAATAAATTCCCCC 1328 30 100.0 37 .............................. TAAATATCCCCTCACTTTAAAATATTCACATAGTGCA 1261 30 100.0 36 .............................. ACAAATACACTAAAACCGTACCCGCGCCTGTCGATA 1195 30 100.0 36 .............................. TGTGGGAAATGCTTAGTTGACGAGCGTATCAAGCAC 1129 30 100.0 35 .............................. TGGATTTGCAAAAGGCAGTGATAGCGTATGATCCA 1064 30 100.0 36 .............................. AGCGCAACCGCCTGCGCCACTAGCGTTTTACCTGTA 998 30 100.0 35 .............................. AACGCTTGCCGCTCGTACAAGCCGGCGAGAAGCTG 933 30 100.0 36 .............................. CCGTTCCGGCATGCGATGGCTCAGTTCGAAATGTAT 867 30 100.0 36 .............................. AACGTGAACGGACGCACGTTTACTGCCCGCACAATG 801 30 100.0 34 .............................. CGTTTTTGCAAGGTAATCGAATGTATGTGTCGTA 737 30 100.0 34 .............................. TCCAGCACGACGCCAACAAACTCGCTTGGCTCAA 673 30 100.0 36 .............................. GTAGAGTATGGGGCGCTATTAAAACTGCTGTTTCTA 607 30 100.0 36 .............................. ATCTTAATAGCTTTTAACGTCCCGGACGTAATGCTA 541 30 100.0 36 .............................. TCGCTGTCGCGCCATAATAACTTGTACCAAAGTAAG 475 30 93.3 0 ............................GG | ========== ====== ====== ====== ============================== ===================================== ================== 21 30 99.7 36 GTTGAACTTTAACATTGGATGTATTTAAAT # Left flank : TAAGTCATTTTATCATAAAACATCTAAAAATTGATGAATTTACTCTTCAGAACTGTCTGCAAAGACGGTCT # Right flank : GCTTGCTGAATAAACAAAAATTCCAGATTTAGCAAGGATTTTGGCTACTTTTGTCGAATATAAAGTGTAAGGATTTTATAGGAAACGTGTAAAAAACCTTGCACTTGGAGGCCGTTACGATGTACAAAAAGACCGAACATCAATTAACTTTTGTAGAAGATTTTTTTCTACCATTCGGTGGAAAATTAAATAAAGAAAATCGCTGGGTCCGTCTTGCTGAATTAATCCCTTGGTGGAAGGCTGAAGAAAAGTATGCCAAGTCCTTCAAGAAAAAATTCAAGAGCGAATAGACAGACTTATTCTGTCAGAATTGCTCTTGGGGCTCTATACAAAGAAAGGCTTGGGCTATCTGACCGGGAAACAGTCCAACAGATCACGGAAAACCCGTATTTTCAGTATTTTATCGGATTACCTGAATTCCAGGAAAATGCCCCATTCTATCATTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACATTGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 99580-101051 **** Predicted by CRISPRDetect 2.4 *** >NZ_JSVI01000006.1 Weizmannia coagulans P38 Contig6, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 99580 30 100.0 35 .............................. GCCATCGCCCACATGACATATGATAAGGACATTAC 99645 30 100.0 36 .............................. TTTTTTTATCTCTGGTGCTGTTTCTTCCTGCTCGGC 99711 30 100.0 36 .............................. GCAGATACAGAAAAAATATTTTTAAAATTTTGTTTT 99777 30 100.0 35 .............................. TTGTTGCCCGTAATTTTTCTATTTTTGCATGATCA 99842 30 100.0 36 .............................. AAGTCCGCCATACGGATTGCTGCGTCCTCTGTGGAC 99908 30 100.0 37 .............................. AGATAAAGAAAAAGCTGTTCGAGCATAAATATCCCCA 99975 30 100.0 35 .............................. AGAAGAGGAGGAATCAAGGATGAACAAAAGCTTAT 100040 30 100.0 38 .............................. TTGTTGATTCCCGAAATAGATAGAGATGCAACACAGGC 100108 30 100.0 36 .............................. TGTTTAAATTCCTCCTTAAAAATTTTTATGTAATGT 100174 30 100.0 38 .............................. GTTACATCCGTCCATTTTTCCAAAACGCGCGATCCGCT 100242 30 100.0 34 .............................. ACGGGCTTTGCATTGACGCGCTCATGACCTTTGC 100306 30 100.0 36 .............................. AAGTTGGATGCAAGAGGCGATCGTTGACAGGGTTGT 100372 30 100.0 36 .............................. AGCGGACATCCCGATCAAAAGCACGGTGGTCTGCGA 100438 30 100.0 34 .............................. TCGTAAAGCCTCCGTATAGCCAAACTAACCACAT 100502 30 100.0 35 .............................. CAGACAGCCTGTTGCTTGCCCCAAAACCTTTGTTT 100567 30 100.0 35 .............................. AAGACTAGAATTGCCTATTGGAATATCCCAGCTGA 100632 30 100.0 34 .............................. TTTGTTGATGTTGCTACGATAAATAATAATAACC 100696 30 100.0 35 .............................. CAAATATTGACGACGAATTCGGCACAATTGGAAAC 100761 30 100.0 36 .............................. CTGGACAAGCATCCGTCAGATGTGCTGGGTGATATC 100827 30 100.0 36 .............................. CTATTACAAAACACGATCCGCAACAAGTGAAAAAGC 100893 30 100.0 35 .............................. CCGTTCTGCAAAGTATTGAACAAATTAGCAAACAA 100958 30 100.0 34 .............................. AAAACAAGAAAGAGCACAGCAACCAAAGGAACAG 101022 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 23 30 100.0 36 GTTGAACTTTAACATTGGATGTATTTAAAT # Left flank : CCTTTTAATGCAAAGGAGATGGTATAGTGGGGGCAAAAAAGTCGCTTAATTTTAACTATGTATTTTTATTTTATGATATAAACGAAAGAAGAGTACAAAAGGTTTTTAAAATTTGTAAAAAATATTTATATCATCATCAAAAATCTGTTTTTCGCGGTGCTATTACACCATCACAGCTAATTTCTCTTAAAAAAGAGCTTAATAAAGTAATTCATAAAGATGAAGACTTCATTTCTATTGTTAAGTTTTTAAGTGAGTTCTACTTTGATGAAGAAACAATCGGCAAAAACCCGGGAGATGGAGAATCGATATTTTTATGACTCACTTTTTCCCAACCGAATAAATACGGCACAACTGGCGATCACTTGGTATAAAAGGCTTCTGAGGGAATTTGGATGGACATATCAAAAAAACGATAACGGTTGGGAAAAAACAAACAATCCACTTGTACCAAAGTCTCTAGCTGAGGTATACTTGCAGTAAGTGTTGAAAATACTGGG # Right flank : ACGTAAAGATGACCGGTTCTGCAAAGCAGCTCTGAGGAGTAAAAATTTTTCGTGATAATTTAACTATTCCCCCCCCAAAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACATTGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //