Array 1 104406-102176 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBGR010000101.1 Myceligenerans sp. TRM 65318 391, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 104405 29 100.0 32 ............................. TGCCAGATCCCCTCGCCGTCGAGCGGCATGAT 104344 29 100.0 32 ............................. GTGGCGGGCCCCAAGACCTGGGCCGCGCTGCT 104283 29 96.6 36 ............................G TGGATCGACGAGGAACGCGCCGCGGCGGTCGCCGGC 104218 29 96.6 32 ............................G GCCACGGCTCGTGACACCTGACCCGGGATGTG 104157 29 100.0 32 ............................. GGAGCTTGTTGACCGTGGTGCGGATGTCGGCG 104096 29 100.0 32 ............................. GGCGCCACCGTCATCTGTGCCATGTCCAGGAC 104035 29 100.0 32 ............................. GACCAGCTGCTGGATCTGGCGCTGCGGACCGA 103974 29 96.6 32 ............................G GCGTCCTCGATCTGCGCGGCGGTGGCGGTGAG 103913 29 100.0 32 ............................. GCCATCCGCACCAAGGACGGCCTGATCAAGAT 103852 29 100.0 34 ............................. TCCGAGCCGCCCACGCTCACCGCGATGACAGGGT 103789 29 100.0 32 ............................. GACGTCGCCGTACCCGTCCGGGACGGGCCACA 103728 29 100.0 32 ............................. ACGACGCCGAGCAGGCGCCGCGAGATGAGCTG 103667 29 100.0 32 ............................. AGGTTCGCCAGCGCCGCGCGGGCGATGATGGA 103606 29 100.0 32 ............................. GCGATCCACGCCGCGTCGAGCTCGTAGACCTC 103545 29 96.6 32 ............................G TGGTGGGTCACGCGCACGGTGTCCCCGACCTG 103484 29 100.0 32 ............................. TCACGCAGGCGACCACGCCAACGGTCGGCGAC 103423 29 100.0 32 ............................. GCGGATCGAACGGCCTGCGCATCACGGCCGAC 103362 29 100.0 32 ............................. GGCCGCCGGCACCTGGTGCTCGACATCATCGA 103301 29 100.0 32 ............................. GACGACCTCGGCGAGAACGAGGCGTTCCACCG 103240 29 100.0 32 ............................. GACGCCGTGGCGATCGAGTACGAGTGGACCGA 103179 29 100.0 32 ............................. ACGGGCCTCGGCGCGTGCGTGTGCGTCGTGGC 103118 29 96.6 33 ............................A CAGCGCACCGAGGCCGGGCAGCATGCCCAGGCG 103056 29 100.0 32 ............................. AATCTCATCAACGCCTAGAACGTGAACTGGAG 102995 29 100.0 32 ............................. CGGTGAACCTGGACATCAACGGCGACCCTGGC 102934 29 100.0 32 ............................. ACCTGGCCCGCACGCTCCCGCCGCCCGCCCGA 102873 29 96.6 32 ............................G ACCGGGCGCTTCACGGAGCCGAGCGCGAGGCG 102812 29 100.0 32 ............................. TCGAGGTCCAGGACCGGCCCGGACTGCTGCAC 102751 29 100.0 32 ............................. AGCGGACGGGACGGGCGGCCGGTGGACATCCC 102690 29 96.6 32 ............................G TGCGCACCGCGTCCACCAGGCGTGCGCACGCC 102629 29 100.0 32 ............................. GACGCCAAGGCCGAGGAGTACGCCTGGACGAG 102568 29 93.1 32 ......T.....................G GGCGGGACATCAGACGTGATCACCACGGGCAT 102507 29 100.0 32 ............................. ACGGGCCTCGGCGCGTGCGTGTGCGTCGTGGC 102446 29 100.0 30 ............................. GCGATGACCCGGAAGTTCGCCGCGTTCATG 102387 29 75.9 31 .A..GT...A.G........A.......G GCGACGGTGGTAACCGAAGCCGCGCCGATCA A [102383] 102326 29 79.3 29 .GCAAGT...................... ACCGCCCGCGTCGTTCGCGAGGGCGTCAG C [102311] 102267 28 93.1 32 ......................-..C... GCGCTCGGCTGCCATGTGGTGCGGTAGATTCG GA,G [102262,102265] 102204 29 82.8 0 ...G....TA...............C..G | ========== ====== ====== ====== ============================= ==================================== ================== 37 29 97.3 32 GTGCTCCCCGCCGACGCGGGGGTGATCCC # Left flank : CTGACGACCTTGACGAGGAAATATCGTGATCGTCGTCGTCGTGACAGCCTGCCCGCAACGGCTGCGCGGTGACCTCACGCGATGGCTCTTGGAGATCAGCGCCGGAGTGTTCGTCGGTCATTCCTCCGCTCGCGTCCGCGACATGCTCTGGGAACGGATCATCGAGCACGTCCGGCAAGGCAAGGCTCTGATGGTTCATTCCACGCGCGGAGAGCAACGACTCGCCTTCCGAGTCCATAACCACGACTGGGAACCCACCGATATCGACGGCCTCACCCTCATGCGGAGACCGTCCAAGCGGGGCGCCATGACGCGCATGACCTGGGAGAAGGACGGCGAGGAGCACGAGGACGACTCCAAGCGAGTGCCCAAGCGCGCACCCGAGAACTGGAGCATCGCAGCGCGACGTCGCCGGTTCCGCAACGAAGTCGAACGACGGCATGCGGAGCAAAGTGAAGGAGAAACCGGAGAGCCGTCCCTATAGTGCCTGGTCAGCAAGT # Right flank : GCGTCCCAGCCCTCGCCGCAGGCGTGGCAGTTGCGTCCGGCGTGGCCGCCGCGTCGCGACAGCCGGACCCGGATCACAGGCGGGCTCCTTCCTGGCCCCGAGGCGGGACGCAGGGGACACTGGCGGCATGAATGCTGGAGCGACTCACTGGAACCGGATCGCGGTGGACCCCACCGTGGTGCACGGTAAGCCGCGGATCCGTGGAACCCGGGTGACGGTGCAGGCAATTCTGGAATTGCTTGCTGCTGGTGAGACCTTCGAGGAACTCCTTGAGGAGTACGACGAACTGTCCCGGGAGGACATCGTCGAGGCCCTTGAGTACGCGGCCTCGGTTGCCGGCGGTCTCCAGGTTCAGGCCCTTGTCCCCTGAGGTGAACCAAGGGGAGCGTACGGGCGGTCGAGCCTGCAACAAGGGCTCGGCCACGAGTGGCACGCAGCAGGCACGCCGCCCACCGGCCATGGTCCTCAACTGCAGAAGGTCGCCAGCAGCGTGGGGCTCC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCCGACGCGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCCGACGCGGGGGTGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [26-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 116568-114159 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBGR010000101.1 Myceligenerans sp. TRM 65318 391, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 116567 28 100.0 33 ............................ CGTTCAGCACTTCGGCGACGTCGGGAAGGATCA 116506 28 100.0 33 ............................ CAGCTCGACCGGCGGCGTCGACGGGACCGTCCT 116445 28 100.0 33 ............................ CGCGCGGATCCTGCCGTCCGGCGACAGCGAGAG 116384 28 100.0 33 ............................ CGAGACGTTCCTGTACGCCGGCCGCGCGCAAGC 116323 28 100.0 33 ............................ CGGCCGCACCACCGGCACCGTCGGGGACATGCA 116262 28 100.0 33 ............................ CATGACGCAGAACATCAAGGTGCCCGACCCCCA 116201 28 100.0 33 ............................ GTCGTGGCCGAGCATGATCGGCCGGGACTCCAG 116140 28 100.0 33 ............................ GTCGGTCATGCGGGCGTCGAACTCGGCCCCCGC 116079 28 100.0 33 ............................ CACCGCACCGCGAGAGACCTGGTACCAGTGCGC 116018 28 100.0 33 ............................ CACCGAGTCCGGGCCCGCGACCTGGACGCTGAC 115957 28 100.0 33 ............................ CATGGTCACGCACATGCCCAGTGACCGCGTCCA 115896 28 100.0 33 ............................ GACGATCCAAGCGCTACCGCCTCCAACAGTGAT 115835 28 100.0 33 ............................ GTCGTGGAGACGGGTGTTGTCGCGCATGCAGTC 115774 28 100.0 33 ............................ CGCCCTGGCCGACCAGGTTCGCACCCTCGACCT 115713 28 100.0 33 ............................ CGCCTGGGGCCGCATCGACGTGTCGCCGCTGCT 115652 28 100.0 34 ............................ TGACACACGGAGGGGCCCCGCCAGTGGCGGGGCC 115590 28 100.0 33 ............................ TTCGGCCGTTGCCGGGAGGCAGTCCTGACAGGT 115529 28 100.0 33 ............................ CGCGCGCCTGGTCGACCTGCTCACCGACTACGG 115468 28 100.0 33 ............................ CACGGCGTACAGCACCTTGCGCGCGCCAGCCGG 115407 28 100.0 33 ............................ CGTCACGCTCAGATCCGGCGAGTAGCGAGCCTC 115346 28 100.0 33 ............................ CGCCGAGACCGGCTCGCCGTCGTCCGCGCGGCC 115285 28 100.0 33 ............................ CACCGCTCGTGTGCGCCTGTCACTCACTCGGGT 115224 28 100.0 33 ............................ CCCCTGCCCGATCGTGGCCACGTCCGATCCGGG 115163 28 100.0 33 ............................ CTTCGCGTCCATCTGCCCGACCTCGGCCAGCAG 115102 28 100.0 33 ............................ GGTCGACCGTGTCCTCACCGATGCCGAGGCCGA 115041 28 100.0 33 ............................ CGAGCGCGGGCGCACGTGCGCCCACGGCCACGC 114980 28 100.0 34 ............................ CGCCGACTCCCCGGAACTCAACCTCTCAGGCGAC 114918 28 100.0 33 ............................ CCAGGGCGAACGAGCCGCCGACCGCATCGGCCG 114857 28 100.0 33 ............................ TGACGCGGCGTGGTGTGGCCTACGAGCTGCCGA 114796 28 100.0 34 ............................ CAACGACGCGACCAACCTCACCCGCGAGGTGCAG 114734 28 100.0 33 ............................ CGGAGGTTCGTCGTCCTCCATTCCGGGCAGGTA 114673 28 96.4 33 ...........T................ CCCCGAGTGGGGCGAGTGGATCGCGTGGGTGCA 114612 28 100.0 33 ............................ CGACCGCCTGACCGGCGCGCTCGGCGTGGCCCT 114551 28 96.4 33 .................A.......... CAGCCGCACCGCGCCGTCCGACAGCGCCGGGTG 114490 28 100.0 33 ............................ TGGTCGGGGTGGTGTCGAAGGGTGTCGCTTTCG 114429 28 100.0 32 ............................ GGCATGTTGCGGCGTAGCTCGATACGCCCGGT 114369 28 96.4 33 .....................C...... CACGCCCCCTACGCCGAAGGGCAGGCCGCCGCA 114308 28 100.0 33 ............................ CGGCCTCGTGCCGACGACGGCGGCGATCTTGGA 114247 28 92.9 32 ............G............T.. TCCTGGCCTCAGACTTGCGGCTACCCCTGGCC 114187 28 85.7 0 ........T...G...TC.......... | G [114162] ========== ====== ====== ====== ============================ ================================== ================== 40 28 99.2 33 GCAGTCCCCGCCAACGCGGGGGTGACCC # Left flank : GGCGTCAGGCTCGAGAACGTGAACCCCAGCCCCGGCACGCCCGCCCGGCCGTCGGGGCGGATCACCGTACGGCCCGACTTCTCGGCGTCCGGATGGGGATGCGGTGTCCCCAGCGACCGGGCGGTCCGCAGAAACTTGGCCTCATCGATCTGAGGCAGGACCACCAGGCCGTCAATCGACACTTGCTCTCGCAGGTCGTTCAACGCGCTCCTCCACCACCGGATGTTTCCGCAGGCCAAGTCTCCCAACCACGTGAGTGAGGGGCAAGAGACGATGTACGTCTCTCACCTGAGCCCTTCGTTTCCTGATGGCTCAGCATCGTCGTCCTGATCGTCGACGTCCCACTGTCGCCGACGTCCCGCTGTCGTCGACGACGACGCCGTGTCGGACGCCGAAACGTGCGCGTGTGCCGAGGTATGCCGGGGAGCGATGCGAGCGACTCTACGATCAAAGTGAACGTAGAACCGGTGCTTGCTCGGTATAGTCCCAGGTCAGCAAGT # Right flank : AGCTACCTCGCCCATGCCCAAGATGTCGCTCTGCGGTGCGCGCTGACGTGGGGGATCCCGGATCGTTGTGCGCTCGCGCCGCATGCCCGGGTGCTCTCTGCCGTCGCTGGGTTGATGCGTACTCATATTACGTACGTGGTATGAGATGGGGTGAAGCTTAGCCATGCATCTTGACATGGTTCGAATGGCATCTCATGCTTGCGCCTGAGCGAAACGTCCAGATCGTGCGCACACCGTACCGGGAGACACTGACATGCCCCGAGGGGCCGCAAGTTCGCTGTGGGGCAAGACCAGCGTCGATGCTGATGGGGTCTTGACCTGGTTGCCGTTGATCCAGCACATGGAGGACAGCGCCGCGGTAGCGGGTCGGCTGTGGGACCGATGGCTCCCAGCGCAGCTGAAGCGGGTTCTGATCGATGCGCTGCCCGCCGACGACGTCGGTGAAGGCTTCCCTGACGGAGAGGCCGCCGCGCGTGCACTGCTGGTGTTCGTCGCGGGAG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGTCCCCGCCAACGCGGGGGTGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //