Array 1 26085-23391 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCFK01000005.1 Lactobacillus helveticus strain IMAU60227 Scaffold5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 26084 32 100.0 34 ................................ GGTCAACGATGTTAAAGCAGCCAATCCTTATGAT 26018 32 100.0 36 ................................ TTTAGTATCCATAGCCTGTAAGTCCTCCATCCACAA 25950 32 100.0 34 ................................ TTCTAAGCAAAATAAAAGCCACCCGAAGGTGGCA 25884 32 100.0 35 ................................ TTTGAAGTCCTGTGCCTGCGAACTGGTCAGTATAC 25817 32 100.0 34 ................................ GTATGGGAACTTTTATCATAATCACTCTTGTTAA 25751 32 100.0 34 ................................ AAGAAGATACTGCCTGACCGGTTCCACATTAGCA 25685 32 100.0 35 ................................ ATGTAGTGAGTGGCTTTACCATCAGCTCTCATAAC 25618 32 100.0 34 ................................ AAAACGAGCTTAAAGCGCCAAAAAACCAATGGAA 25552 32 100.0 35 ................................ ATCAAGATTGTAGTTGCGCATTAGGAATTGTTTTT 25485 32 100.0 34 ................................ ATTTGAATATGCACGCAGATGATGATGGCTTTTT 25419 32 100.0 35 ................................ ATATCTCAATATCAGCTCCCTCCAAATATATTAAG 25352 32 100.0 34 ................................ ACTTCGCCAACAGCCTTTTCAACCGCGCTATTAA 25286 32 100.0 35 ................................ AAATATGATGATCCAAACGGTGGCGACAACGGACA 25219 32 100.0 34 ................................ TTTAAAGACATCGTAGCACCGGCTGAAACTGATC 25153 32 100.0 34 ................................ ATGATGGGCTACCAGTATCCAACACATTGTCTAA 25087 32 100.0 33 ................................ AATCGAAAGCTCAATATATCCCTGTGAAATAAC 25022 32 100.0 34 ................................ CGTTCTGCTGAAGAAATTGCTTTACTAATTCTCT 24956 32 100.0 35 ................................ TCCGTATGGAATATCGGATAGCGCTTGAACACCAG 24889 32 100.0 34 ................................ CGCTCTTGCCATATTTCGTAATTGCATATCGAGA 24823 32 100.0 34 ................................ CTATTGCGTTGTTCATCGCAATAAGATGTAGGGT 24757 32 100.0 35 ................................ TATCACAGAAAGCAACACTGCTACTTGGCATTCAA 24690 32 100.0 34 ................................ AAAAGGTGAACCACATCAAGAATCCAAACAAGAT 24624 32 100.0 34 ................................ AAACCAAGCCATGCCTGATGCTGTATAAGCATCC 24558 32 100.0 34 ................................ ATAAAGGTCTTTAAGACCAGTACCATTAGCAAAG 24492 32 100.0 34 ................................ TTGGTTACGACTCTGACAAAAGCAAGAAATCAGA 24426 32 100.0 34 ................................ GTTTGTATTGCTTAACAATATGACCAAAAATTTT 24360 32 100.0 34 ................................ AGTTGTTTGTTGATTAGTTACAGTTTTAGTAGTT 24294 32 100.0 35 ................................ AAAGAACATAGTTTGCAGAACTGTTTCCAAGTAAA 24227 32 100.0 36 ................................ TCTAAGAACTCTGAAACAGTGTGCTTGATCCAGTGC 24159 32 100.0 36 ................................ GGCTTTAGATGCGTCAAATGCCGCCTGTGGGCTATC 24091 32 100.0 35 ................................ ATATACTTGAGAGCCCCACCTTGAGTTTTGCCAAA 24024 32 100.0 35 ................................ AAAAATTGTTAAATGCAGGATGGAGCTAGACTATG 23957 32 100.0 34 ................................ ATTGATGGAAAATAGCCAAAGTCAGGGCTATCAA 23891 32 100.0 36 ................................ CCTCCTAGATTTCTGCCAGTGAGCATTGTGTCTGTG 23823 32 100.0 34 ................................ ATATAGCACATTAAGGCATGACCGAGTTAATATC 23757 32 100.0 36 ................................ GCCTTCCTTGACCACATGTGCTTGACAGCCGGTATA 23689 32 100.0 35 ................................ CAAAAGAACCAGTTCACGTGCCAACAGGTAAGTAA 23622 32 100.0 35 ................................ ACTGCTAAGGGCAAACCATTGGACTTGCTTAAACA 23555 32 100.0 35 ................................ ATCAAGCTTGCCAACGGGTCGATTTTATTCTGTGA 23488 32 100.0 34 ................................ TTTTGAATAGATGGCATGTAAGTCTGATATAGTT 23422 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 41 32 100.0 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGTGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTAGGTCCATTGCACTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCGGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //