Array 1 167348-167040 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE136480.1 Enterococcus haemoperoxidus ATCC BAA-382 acOSg-supercont2.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== =================================== ================== 167347 34 94.1 33 ................................TC CCCATTTCATAAAATAATATCTGTAACAAATTG 167280 34 100.0 35 .................................. CCTGAATTAACTATTGTTTTGGACCAAATAGTGCG 167211 34 100.0 34 .................................. AGGTAGCGCTGATAAAGTGAAAAAGTACGCTGAG 167143 34 100.0 34 .................................. AAACTGATCCTCCTGGAGAATTTACGTGAACTGG 167075 34 73.5 0 .................TG.A.C....AC..CGT | TA [167050] ========== ====== ====== ====== ================================== =================================== ================== 5 34 93.5 34 TCTAGCTCTGTTTAGAGCTAGTGGATTGAAATAA # Left flank : AGATGGTTATCCACCGTTTTTATGGAAGTAGGTGAAAAGTATGTTAGTGTTGATTACTTATGATGTCGCAACAAGTTCGAAGAATGGAACTCGTCGTTTGAGGAAGGTAGCAAAAAAATGTCAAGATTATGGACAACGTGTTCAGAATTCTGTTTTTGAATGTGTTGTTGATGCAACGGAGTTAACGAAGCTGAAGAAAGAACTGGTTGATTTAATTGATGAAGAATTAGATAGTTTACGTATTTACCGATTAGGGAATAATTACCAAAATAAAGTTGAGCATGTAGGGGTAAAGGAGAGTTTTGATGTAGAAGCGCCACTGATATTTTAATAAGAAAATTAAGTGCGAACCCTAAGTGCACATGAAATCGCTAAGGGATCCGCACCAAAATTTAGCCATTTTTATCAATAAAAAGCTGTTTTTCTCATGGGAATTTAATTTTATAAGTGTTTTTTATGAAAACGCGAAAATATATCGTGTATTTTTGCCGTTTTCACTG # Right flank : TTATAGTTATCTTAGGATAGCTCATCAAGTACTAAAAATCAGTTGATTACATCAAAATAAAATAACTAAAAGAAGAAAGCCAAGCATTTTAGCCTGGTTTTCTTCTTTTTTATCCATTAAAAACCTCTAAACATCCAATATTTAACTATCACAAAGTCAACAAAAAATGGAACTAGAAGTTATATTTATAAAAGGTATAATAGAGTGACATGCTGTCATTCGTTTTCCTACTACTATTTGGTCACTCTATTCACTTAACTGAAACATACATAAGCATTAAAAAAAGACCTAGAAAGTAAAAGTCCCCAATGATGCCTATGGATAATTCAAATAATACAGAAAATTGCGTAGCAAAATGAATCTGAAAAGATTATTTTTTTGCAGAAAAAATTGTTTTATATATGTTATTTTAAATAATTTATTCTTGTTATATTAACAAACAAGAAAACTGAAAGAATAATGTTATTTTCAGGTCTCTCAGCTGATAATATAATGTTTTG # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTAGCTCTGTTTAGAGCTAGTGGATTGAAATAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.86%AT] # Reference repeat match prediction: R [matched TCTAGCTCTGTTTAGAGCTAGTGGATTGAAATAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 663940-664650 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE136479.1 Enterococcus haemoperoxidus ATCC BAA-382 acOSg-supercont2.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 663940 33 100.0 37 ................................. TTTTTATATCTAAGGACTAAGGTAAGACCCATATTTC 664010 33 100.0 35 ................................. CGCTATCGGGACGCCTGATGGTGCAGCGGAGATGG 664078 33 100.0 35 ................................. ACTGCTTTTTTAGATAATGCTCCAGAGTTTACGTT 664146 33 100.0 35 ................................. TAATCTAAAAATTAATTACACTTCGAGGGTTAATC 664214 33 100.0 36 ................................. ACGTTGTCCGTTTCATCTCCGTGAACCATGTATTGA 664283 33 100.0 34 ................................. TTTTATCTTATGAAGTAAATCATTTCTTTGATTT 664350 33 100.0 33 ................................. TGTTAATGCTGATACCAAATTGCTATTATCAAT 664416 33 100.0 33 ................................. TTTTAAAAGCTTGCCTATATATAAATAATTATA 664482 33 100.0 34 ................................. ATCAAGTGATAAACGACTGCTAACATTATCAATT 664549 33 100.0 34 ................................. AGGAACGCTGCAACGAAAATCAGCAGCAAACAGT 664616 33 75.8 0 ..........AAAC........ACA.A...... | AC [664642] ========== ====== ====== ====== ================================= ===================================== ================== 11 33 97.8 35 GTCTCACTCTGTTTAGAGTGAGTGGATTGAAAT # Left flank : ATAAGCAGAAATAATTTTGGTGGTATCAATAATTCAACGGTTGTAATAGGAAATAATAATCGTGTTTCAAATGGAAAAAATGAAGAAATCGATTGGGAGAAATTCTCAGCAGAACTCATGACAACATTGACGAAACTTCCACAAAACAGCGAAGAATTTCGCGCATGTACGCAATTGTTGGTAGAGTCGACGTCAAAAGATGAAGGCAAAGTTTCGGCATTTTTAAAAAAGCATGCACCGCAGTTTACGTCAGATGTATTTAGTAACTTAGCTAGTACGCTGCTTGCTGATACAATCAAGAAACTGATGGTTGTTATGTAGTAGTAGAGATAAATAACGTGAGTGCGAACCCCAAGTGCACATAAAATTACTGGGAGATCCGCACCAGTTTTTGACGGGAAAAGAACCATTTTTAATGATTTTTCTCATCTTTTTCACATTTTATATTTTTTTTTAGGTGAAATTATTGTATTTTTAAAGAGAAATACTGCATTTTCACG # Right flank : TAAACAATTTGTAAAAAGTATAGACGAGATTTTGTATTTACGATAATATAAATATATCTATCATTTGTATGGATAGTTTTTTATCAATGGAGAGGGAATAATAAAAAAAACAGTAAAAACATCTATGGTTTTGTTGGCCTTAGGGTTAGGTTTGTCGATTGGAACAACTGATGAAGTTGAGGCGATATCAGAATCGCCGTACGCTTTTTTCAATGAGTTGAGCATAAGAGAAACAGTTGGAACAGAGTTAAATCAGGTTTACAAAAATAAACATAAGAAAAAAAACAGATAAATTAAATAATGACTTTGAAAATAGTTTGATCAGCAATGAGGAGTATGAGAAACTTTTTGACAAGTTGACAGAGAAATTTGAAGCCAATTTATTAGAAAAACAATCGTTGTTTAATGATTATCAATTATTTAAAAAAGAAGATATAAAAGATATTACTTTTTTTGGTGGTTAGTTTGAACGTAATTCCTCTTTGAGCGGATTCAATCAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACTCTGTTTAGAGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.61%AT] # Reference repeat match prediction: F [matched GTCTCACTCTATTTAGAGTGAGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-3.80,-3.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 838237-839160 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE136479.1 Enterococcus haemoperoxidus ATCC BAA-382 acOSg-supercont2.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ====================================== ================== 838237 34 100.0 34 .................................. CTTACCCTAAAAGTAGAGGCTTCAGTAAACCACG 838305 34 100.0 34 .................................. AAGAAATTGATCGGCATTTAGACGGAATTTTGAT 838373 34 100.0 33 .................................. AAGGATATTCGGATGAGGATTATTATCGTGCTG 838440 34 100.0 38 .................................. CCAAACTTGGCTTTTAAAAAAGGACCAGTAGTTGTGTC 838512 34 100.0 35 .................................. CTAGATACTTTAAAATAATTAAACTGGCACTTATT 838581 34 100.0 33 .................................. CCTGAAAAACGCCGATTATTGTATCTTTAAAAT 838648 34 100.0 35 .................................. GATGGATACAGCAGTTTTGAGTTATCTGTGACCAA 838717 34 100.0 35 .................................. CTTGATGCGACTCAATATTTTACGTACACGGTGCA 838786 34 100.0 34 .................................. TAAATTTAATTTTTCCATCCCTACTCATTCCTTT 838854 34 100.0 33 .................................. TTTTTGCTTTTACGCTTATCTCTTATCGTTAAC 838921 34 100.0 35 .................................. GCCACAGGCGAGACGGTGCAAGGATACGCGTTTTT 838990 34 100.0 34 .................................. CAGTACGTTGATATGGATCTCTCATGATACATTG 839058 34 97.1 35 .....G............................ CAAATGCCAAGCGACTTGGAATTCGTAAGTTTTAG 839127 34 100.0 0 .................................. | ========== ====== ====== ====== ================================== ====================================== ================== 14 34 99.8 35 GTCTCACTCTGTTATGGAGTGAGTGGATTGAAAT # Left flank : GGAGATGGCGGTGCAGATATTTTACCATTGTTCCGTTTAAATAAGCGTCAGGGAAAAGCATTGTTGAAAGAACTAGGCGCGCCTGCTGAATTGTATACTAAGATTCCAACAGCTGATTTAGAAGACGATAAACCATTAGTTGCAGATGAAGTAGCACTTGGTGTAACGTATGATGATATCGATGATTATGTTGAAGGCAGAGCAGTATCGGATAAAGCAAGAGAAACGATTGAAGGATGGTATAAAAAAACGCAACACAAACGTCATATGCCGATTTCAATTTTTGATGATTTTTGGAAATAAGCTTCAGAAAGTTGGCGGGATAATATTTGGTGCGAACCTCAAGTGCCCATGAAATCACTAGGGGATCCGCACCAAAATTGAAGATGAAAATGCCTTGATCTAGCTGTTTTTCTCATTTTATTTTAATAATTACTTAGATTTATAAAGGAAATTCGTTATTATAAGTGGTTTTAGTTAGATTAACTGCCTTTTTCACA # Right flank : TATTTGAAGCTGATGGTGGTTTTCTTTTTGCTTCACTCTGTTATAAAAGCCAACTCCAGAAAAATCAAGTAAAAAGAAAGACTAAAAATATTAGCCTTTCTTTTTTTACACCTAACATTACGCTAAAATACCTTCATTTTGTTCAAATGGTTAAAAAAAGTGTAAAATTAAACTAGTTATCTGAAATACTGGGTAAACTACTCTACAATTGGTTTAACAATAGTAATAAGAAGGTGAATGAAAATATGAAAAAATTGTTTAGGAAAAAAAGAGATATCGATAACGAGGCGTTTCTTTCATCTGAAGAAACGATAAAACCTATCAATCATAGTGATATTCGGATTCCCACTGATATTAAAGGGCTATCTGATCAAGAAGTACAACAGCTTATTGCAGAAGGTAAAACCAACAAAGAAGTTGAGGATTTATCTAGAACAACGAAGCAGATCATTTTAGATAACGCATTGACATTATTCAATTTTATTAACTTGTTTTTAGCA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACTCTGTTATGGAGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.82%AT] # Reference repeat match prediction: F [matched GTCTCACTCTGTTATGGAGTGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 2139349-2138169 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE136479.1 Enterococcus haemoperoxidus ATCC BAA-382 acOSg-supercont2.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 2139348 33 100.0 34 ................................. GCCCTCCTCAGCGTTTAAGTAATATACAAATTTT 2139281 33 100.0 33 ................................. TCTCAAGGAAATGCAATCTATAAGAGATTCATT 2139215 33 100.0 33 ................................. AGGAAAAAGAAAAAAGTATCGATCAGCTACAAA 2139149 33 100.0 34 ................................. TCAAGGTCTAAACAGCTTGTTCAACTTTTTTTAT 2139082 33 100.0 35 ................................. GCTAAGTTTTCAGCCAGTTTATCTACACTGATTCC 2139014 33 100.0 36 ................................. ATTTATCCAAACAGACGAACTAAGAGAACTTTACGA 2138945 33 100.0 33 ................................. TAAAAAAGTCTTTTAACCCGTCAAACTCAGAAA 2138879 33 100.0 35 ................................. AGTTACTATCGCTGAAGAGTTAAGAACAAAGATGG 2138811 33 100.0 35 ................................. CACTCTAACGCAGCAAAACTTTTTCTTGACTGCAT 2138743 33 100.0 35 ................................. TGCTCTGATCTCTTGGATAACAGATTGACCCATTT 2138675 33 100.0 33 ................................. AATTGCGTTAATGGTTTGTTTTGATATCACATA 2138609 33 100.0 34 ................................. TCTACCGATACTCAAAAAAGCAATATACATCCAA 2138542 33 100.0 35 ................................. CCCTTAAAATGGACGTGATATAAGCACGTTCTTCC 2138474 33 100.0 34 ................................. ATTTATCTACAATCACCTGTGATAAGTATTCGTA 2138407 33 100.0 35 ................................. TTCCTTCCATCTTTACAGGCGTTGCGAGATGGAGA 2138339 33 100.0 36 ................................. TTGCAAGTCGTCTGTCTCTGCGTCGGCATCCAAATC 2138270 33 100.0 36 ................................. CATTTATATCTAGTAAACTGCCAAAGTTTCGACATG 2138201 33 97.0 0 ...........................G..... | ========== ====== ====== ====== ================================= ==================================== ================== 18 33 99.8 35 GTCTCACTCTTTATTGAGTGAGTGGATTGAAAT # Left flank : TGCAGTTATCATGACAAATGCTCAAGCAGGTGCAAAAACAATGACGATCAGTGCCATACATGCAGGAAAAGTATTTGTTGATATTTTAGGAAATAACAATGCGAAAGTAATACTGGATGAAACAGGTGGCGGAACATTTCCAGTTAATGGCGGAGAAATCTCTGTTTATGTAAATGAAGAAATTGTAGAAAAATTGAGTAAAGGAATTGATGGTTTGACATTGTAAAGAGAATAGTGATGAGAAGTACTTGCTATTTTTACATAGGTACATGTAAATTAGAGCGTGACTTCTATTGAAAGAATAATTATACTAAGTGTAGGAAGTTATTGGTATAAATTTGGTGCGAACCTTAAGTGCACATGAAATTACTAGGATATCCGCACCAGAATTCAACTGAAAATAGGTGTTAAATCGGATTTTTTCTCATTGTATTCACATTTTTAGATGAAGTCAATGCGAGAAAGTAATAAATATGTAAGTTGTTTGTTACTTTTTCACA # Right flank : GCCTGCGCTGGTTAGTGTCCCTGTTTTTGTTAGTGGTCTCACTCTTTTATTTGAGTGAGTTTTTTTATTTCCCCCTTAATTCCAAAAAAACAATAAGTAAAGTTGAGTTGTCACTATAATTATCATCCTTTAAAAAGAAAATATTGTTCCAAGAATTCCATCATTATTAAAGAATTTTCCTGCTATATTTGGTATAATGTATAAGATTGAAAAAAGAGAGAGGACGTTGATGATGGCACAAGAAAACGCCTTGATCCAAGGTATGAATCCGAGACAAAAAGAAGCCGTTCTACATACTGAAGGGCCTTTATTAGTTATGGCGGGAGCAGGTAGCGGAAAGACTAGAGTTCTAACGCACCGTATTGCTTATTTAATTGAAGAAAAAGATGTTAACCCATGGAATATTCTAGCGATCACATTTACCAATAAAGCCGCAAAAGAAATGAGAGAGCGGGTTGGGAAACTATTAGAAGTTGGTGGAAATGATGTTTGGGTTTCGA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACTCTTTATTGAGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.64%AT] # Reference repeat match prediction: R [matched GTCTCACTCTTTATTGAGTGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.90,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 2194727-2194358 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE136479.1 Enterococcus haemoperoxidus ATCC BAA-382 acOSg-supercont2.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ================================== ================== 2194726 34 97.1 33 .................................C TAGAGTTTGGGGTTACGGTTGCTATAAACCCTG 2194659 34 100.0 32 .................................. CGCATATAAGCTTGACTAAATTTATTCTCTTT 2194593 34 97.1 34 .................................T CCCCAAAACTGTTTTGAGCTACTCGCCACTTTTC 2194525 34 97.1 33 .................................C AAGCATGATCGTCTTTATATGATCCCTGTAAAA 2194458 34 100.0 33 .................................. AACAGATCAAGGATCTACACCCGATTACACAGG 2194391 34 100.0 0 .................................. | ========== ====== ====== ====== ================================== ================================== ================== 6 34 98.5 33 GTCTAGCTCTGTATAGAGCTAGTGGATTGAAATA # Left flank : AGCGTTTTGATTTTCTACAAAAGACATCGGTTAGAGAAGAGCAACAGTTATCATTTGATTTTGAAGAACCGCTTTTAGTTGCTGAAGAAAAAACAGCAATTTTTGAAGATTATTCTCAAGTTGTTTGGCAAAAGCGATCTCTAGGAGAGGTTATTCATATTTTTAGTCATTTAAAATGGCATATTTTAGTTTTCTATGGACGCCAAACTGGGAAGCTAGATACAGGTGAAAATCAAATTTGGTCAAAAAAAGAAGACTTTCAAAATTATGTTTTTCCGAAGCCTCAGCAAAAAATGGTAGAACTTTATAAACAAGAATTTAAAATAGAAGAATAAATTGAGGTGCGAACCCTAAGTGCCCATAAAACCCCTAGGAGGTCCGCACCAAAATTTTGCTGATTTTAGTTGGAAAAACAGGGTTTTTCTCATTTTAATTTAATGTTATACTGTGATTAATAGTTGAATAGTGGAAATATGGTAGGTATTTGCAGTATTTTCACA # Right flank : ATATAGGTGAACCTGTTGTCGGAACACAAGAAATGTCTAGCTCTGTATAGACCCCACTCCTCTTCAAAATCATAACCAATTAACCTTCAAAAAAACTAAAATCAAACCATTTATTTTAATAGTTCCCCTTCATTGTGATGAGAAAGCAAACTCCTTAGTATGCAAAGTTGAAAATTATGATATAATTATGTTGATATCGGTGTAATGAACACCCAAACGAAAAGTTAGTAGCTTTTAGAAATGATTTTTCGTACTAGGGAAAGTTGGGGGACTATGGCAATTCCAAAAGAAGGTGAATTTGTAACGATCCAAAGTTACAAACACGATGGGCATTTGCATCGAACATGGCGTGATACTATGGTATTAAAAACAAGCGAGTATTCTTTAATCGGCGTGAACGATCATACTTTGGTAACAGAGTCTGATGGACGCCGTTGGGTTACTCGGGAACCAGCTATCGTTTATTTCCATAAAAAATACTGGTTCAACATAATAGCGAT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTGTATAGAGCTAGTGGATTGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.61%AT] # Reference repeat match prediction: R [matched GTCTAGCTCTGTATAGAGCTAGTGGATTGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //