Array 1 6861-6115 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEFDB010000017.1 Capnocytophaga periodontitidis strain p1a2 17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================================== ================== 6860 46 97.8 30 ................................C............. AAAACATTCAGTAAGGACTGGAAACAAGCC 6784 46 89.1 46 ...............T...C.......C.A.T.............. TTAGGTAATTTCCAAATTTGCTAATTCTCAAATTTGCTAATTTATA 6692 46 97.8 30 ................................C............. TAGCTTGGTATGAACGTGCTTTGAACGGAA 6616 46 100.0 30 .............................................. TTTGGAACATATTTGGAGACCAGTTTTCTG 6540 46 100.0 30 .............................................. GACAATGGTAATATTATTCGTGATAGTTTA 6464 46 100.0 30 .............................................. TAAAGGAAATTTATTGAGTGATGCTTTTTG 6388 46 100.0 30 .............................................. CGTTACAAAAGACGCAACAACAAAGCAGTT 6312 46 100.0 30 .............................................. GTCAAAGTCCGAAACTTCTATGAGCGAACT 6236 46 100.0 30 .............................................. GATGATTTGATCATAATCAGTTCCTTTCTT 6160 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================================== ================== 10 46 98.5 32 GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACAAC # Left flank : ATAGCCTATGGAGATCATTTGGTAACCCTACCGCTGTACTTAACAGGGGTAGTGATTATGAGTTATCTCTTTGTAAGAGAGAGACCTCAACAGAAGTGGGGTAGTTTCTTGCGTGTGGTGAGTCCTTTTGCAGTGCTAATGCTCATCGCTGGCAGCCTGCAAGATGCGAATACGAGCTTGGCACTCGGTTATATTGCTAGCACTGCGGTGGCTTTCCTATTGGGAATGTGCATTGCTACTGTGAGCAAGACGTACCAAAAGATAGGTTTATCCGTGTTGGCTTTTCTGCTGGTAGTTGCCGTACGGTTGTCGTTTTCAGCGGAGTTTCAATATTTGATAGGCGTACATTGGTATACCTTAGGAAGTTAATCATCTAATAGAATATAGAAAGAGGTTGCTCAGAAGTCTGGGCAACCTTTTTTATGCTTTGTTACTTATAAAATATTTTTTTTGTATCTTTGCGCTTTATTGTTGCTCTATTTGATAAATTAAACATTTAT # Right flank : CTCAATCTTTTAAAGGTTTTAGTATCAATCAGTTTTACTGAAAAACAGTACTGAAAAACCTCCTCTTTTACCTTATAAACAAAGGCTAAAGAGGAGGTTTTCTCTTTCCTATTCTTCTTAAAAAAGCTCTAATTGCACATAAGTTTCGGGAGCTGCTGTTTCTCTCTGACAGTAAAAGAACTCCATATCGCCAAACTGCTTATCAGTTAAGCACATAATAGCTATATTGCCATACTGAGGTAAGTTTTGTTTTACGCGATTGATATGCACTTGGGCATTCTCTCTACTAGGGCAATGCCTTATGTACATCGAAAACTGAAAGAGCGTAAAACCGTCCTTTATGAGTTTATCACGAAAGTTCTGTGCTTCTTTACGCATCTTTTTCGTCTCTGTTGGCAAATCGTATAATACTAATACCCACATAATTCTATAAGCATTGTATCGGTCGGCTATAATCATAATTCAGGATAGGCTATGAGTCGCTTTTCACCCGTATAGCA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACAAC # Alternate repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.74%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //