Array 1 2514-2970 **** Predicted by CRISPRDetect 2.4 *** >NZ_AORZ01000135.1 Streptomyces mobaraensis NBRC 13819 = DSM 40847 contig135, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2514 29 100.0 32 ............................. CCTCGGTGATGCCCCATGCAGCCATGTACTTC 2575 29 96.6 32 ............................G ACCGCGCAGCGGCGGCCGACCGCCTTCGACAC 2636 29 100.0 32 ............................. TTGCCGTGCTCATCCCGGCCGCGATGGAGGTC 2697 29 93.1 32 ......G.....................G GCGGCGACCGCCCAGGACAAGTACGCCGCCGC 2758 29 96.6 32 ......................C...... TCCCTGCTGAACTGCTTCAGCATGTGGTTGGG 2819 29 100.0 32 ............................. GCGGCCGCACTGCTGCCGGGCTGATCAACGTC 2880 29 96.6 31 ............................G GAGGTTCCGGACTATTACGTCGCGGCGTCGG 2940 29 86.2 0 .C.................C.C...C... | CC [2964] ========== ====== ====== ====== ============================= ================================ ================== 8 29 96.1 32 GTCTTCCCCGCACGCGCGGGGGTGGTCCC # Left flank : ATCGACAGCTTCTTCGTGCCCCGGCCGCTCCAGGAGGCGGCCCTGGAACTGGTGGGATCGCCCGCCTGGGCGCGGCACGCGCGGACCGTCGCCGCCGAACTCCGCACCCGGCGCCAGGCGTTCCTCGCGGCGGTACGTCGGGAACTGCCCTCCGTGGCGGTCGACCACGTGCCGCCGGGCGGCTTCCACCTGTGGCTGCGCCTGCCCGACGGCACGGAGGAGGCCGCTTTCGTCGCGGCGGCACTGCGCGCGGGGGTCGCCGTCGCACCCGGCCGCCTGTACTACGCGGCCGAGCCGCCGGCACCGCACGTCCGGGTCTGCGTGGCGGCTGTGGCGGGGGAGGCGGAACTGGTGGAGGGGGTGCGGCGGTTGGGGGAGGCCCTGGCCCTTCCCCGGTGGGACTGACGTCCGCGTGCACCGGGCATGCGAGGGCCTCGGGCCGGGAACGGCATGTGAAGGAAAACCGGGTGCAGCGTGTGAGAAGCTGCAGGTCACGAAGT # Right flank : CAGAGGCCGGCGGTCCCGGGGCGCGGATGTCCGAAGGCGACGCCCTCGGCCAGCCCACCGGCCCACCGGCCCACTGGCCCACCGGCCCACCGGCGGCCGACGCCGCAGCCCGCGGTTCGCCCCCGACCGCTACCCCCCGAGCGGCAGCACCCGTTCCAGTTCCCCGAAAGTCCGCTCCAGCAGCGCCCGGTGGGCGGGCAGCACCGTGCCCGTCGGCTCCCCTGCGAACAGCCGCCGCAGCGACGTCGCGCAGGCGCCCCGGTAAGCGGCGACGGCGAGGGCCGCGGTCATCCGGGGCTGGGGGTCGGCGGGGGCCGGGCCGGGGTGGGACGCGATCGCCGCCGTGAGCGCGGCCTCCAGCTCGTCCATCCCCTCGCGCAGGCGGGCCCGCAGCGCGGGCGACCCGTACACGATCCGCCAGAACGGCAGGTGCCCGACCGCCGACAGCGGATGCCCCTCGTCGAGGAGCCGCAGCGCGAGGCCGCGGAGCGCCGCGACCG # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCACGCGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCGCGCGAGCGGGGGTGGTCCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 54303-54511 **** Predicted by CRISPRDetect 2.4 *** >NZ_AORZ01000004.1 Streptomyces mobaraensis NBRC 13819 = DSM 40847 contig004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 54303 28 100.0 33 ............................ CTCGCGCACTGGCGCGAGCGGTTGCTGCCCCAC 54364 28 100.0 33 ............................ TTCAGCTCTTTTGCATGACACCGGTCACACAAA 54425 28 100.0 32 ............................ GCAGTTGTCGGCCTCGACGAAAGCAGCGGCAC 54485 27 82.1 0 ...A.....-AA........A....... | ========== ====== ====== ====== ============================ ================================= ================== 4 28 95.5 33 GTCGTCCCCGCGGGCGCGGGGGTGGTCC # Left flank : GCCTGGAGGAATGCCGCCGAGAACTCTCCGGCGCTCGAACCGGCCGCCCCCACCCGCCCGTCGCCTCGACGGCCAAACGCTGGGGCTTCCCCAACGCGGCCCACTTCAGCCGCAGCTTCCGCACGGCTTACGGCGTCTCGCCTACTGCGTGGCGGGACTTGCACGTTTCGTCGGTGCCGATGCGGCATGGCCGCGAGGGGCGGCACGGCGCCGGTGGTGACGCGCGCTGACACCGCTCCGGGCGGCGATCAGCGCCACCTCCGGTAGGCGGCGCTCCATCGGAATCGGGCGGCGGTCTGGGCCAGTTGCTCGATCCCGGCCACCTGCCCGACCGTATGCTGGCCTACAGCTCGGCCGTGAGCCGAACACGGTACGTCCGGAAACCCGGCGCGCACATGCGCTGCGCGCGCTGCCCGCACTGGAGGCTCTCGACCACGATCCTGGATTCGCAAGTGAATGAAAACGGGGCCCTGCCCGCGAAAAGCCGCAGGTCACGAAGT # Right flank : CGTCCGTGAAGGCGGCGGGCATGGCGCCGAGTCGTCGTCCCCGCCCTCGTGGCATGGCTCTCAACTCGGCACCCCGCCGGATGACTCCTCGGAACCGCTCCACACGCGCGGGCATAGCCGCCGTGAACGTACCCTCCCGGCCGGACTCGTCGAGCCGCCCCTCAAGAGCGGGCCCCGGTGAGGCCCGCCCCCTCCCCCGCCCCCCGCCACTCGCGCGGCGACAGCCCGTACGCCGCCCGGAAGGCGCGGCTGAAGTGGGCCGGGCTGGGGAAGCCCCAGCGGTGGGCGATGGTGGCGATCGTGGGGCGGTCGCGGGCCGGGGTGGGGCGGGTGAGGTCCTTGCCCGACTCCTCGACGCGGCGGCGGCGGATGTGGCCGCCGACGGTGGATTCCTCGGCCTCGAAGAGGCGGTGGAGGTAGCGGACGGAGATGCGGTGGGCGCGGGCCACGGTTTCGGGGGTGAGGTCGGGGTCGGACAGGTGCCGGTCGATGTAGCGGTA # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGGGCGCGGGGGTGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGAGCGCGGGGCTGGTCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 94444-94050 **** Predicted by CRISPRDetect 2.4 *** >NZ_AORZ01000005.1 Streptomyces mobaraensis NBRC 13819 = DSM 40847 contig005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 94443 28 100.0 33 ............................ GGCCGAGCGCCGCACCCGCCGCTTCGGTGCGGC 94382 28 100.0 33 ............................ GTCCAGTCCACCCCGGCGGACACACCCGCTACC 94321 28 100.0 33 ............................ TGGCGTGCGCGTATCGAGACCGGAGACATGCAG 94260 28 100.0 33 ............................ CCCGGCCTCCATCGTGCCGCGCAGCCGCTCCAG 94199 28 100.0 33 ............................ CGGTGCCCAGGACTTCGCGCCGTCGGCCACCGC 94138 28 100.0 33 ............................ GTACAGCGGCCAGGCTCCGGGCTTGGAGTGGTC 94077 28 67.9 0 .......T.........A...TGCCGGA | ========== ====== ====== ====== ============================ ================================= ================== 7 28 95.4 33 GTCGTCCCCGCACGCGCGGGGGTAGCTC # Left flank : TGGGATGATGGCGACACGGTCGTCACCGGGGGGCGCAACTGGGGTGACCCCTTCGCCTCCGACACCCACTTGGACGTCATCCCGCCACCTCCGCCCGCTCCGGACACCGGCCCGACCTCGGAAACGAGCGGATGAGCGCCGGCACAACGGTGGTCGTCCTCATCGCCGCGCCCCCGGGACTCCGCGGCCACCTCACCCGCTGGTTCATCGAGGCCGCTCCGGGCGTCTACGTGGGATCTCCCAACGCCCGCATCCGCGACCGCCTCTGGTCCCTCCTCTCCGACCGCATCCGCGACGGCCAAGCTGTGATGATCGAGCCCGCGGCAACCGAACAGGGCTGGTCGGCCCGCACGTGCGGCCGCGAACGCTGGACCCCCACGGACTTCGACGGCCTCACCCTTATGGCCCGGCCGCGCGGGGGCGCGGGTGAGCCGTGGCGACCTGGGAAGGAGGTGAAGGAAAAACGGCCCAGCGCCTGAGAACGCCGCAGGTCAGGAAGT # Right flank : CGGGCCGCGGAGGACGGAGGCGAGGCCGACGACGATCAGGCGGCGGACGCCGGCCTTCCGTAGGCCCTCGGTCAGGGCTCGGGTCGACGTCGTGAAGAAGTCGTGCGGGGAACCGGACAGGTCGACGGCCGCCGAGATAGCGGCATCATGGCCCGCGGCCAGGCGTTCCACGGCCGCCTCGTCGGTGACGTCACCCGCCTCCACCCGGGCCTGTGGTGGCAGGTCGCGGTGGCGGGACGGGTCGCGGACCACGGCGGTGACGGTGTGGCCCCGGCGGGTCGCCTCCGCCACCAGGTGACGGCCCGTCCTGCCGCCCGCGCCGAAGATCACGATCTTCATGGGGATGCCTCTCAGCGGGGCCGGAGCCCTTCGCCCCGGCCGGTGCCGTGACCGTAGCCACCGCACCGGTTACCTCCCGGATACCGGTCCGCGGGCGGCTATCGTGACGCTATGAGGGAACCCCTGCCTGCCGACATGTTCGATTAGTTGTGCCCTTCCTC # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACGCGCGGGGGTAGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCACCCGCGGGGGTAGTTC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 105076-105463 **** Predicted by CRISPRDetect 2.4 *** >NZ_AORZ01000005.1 Streptomyces mobaraensis NBRC 13819 = DSM 40847 contig005, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 105076 28 100.0 33 ............................ ACGGACTTTCGTTCCCGGCCGGGGGGCGTTGAT 105137 28 100.0 33 ............................ GACCGTCTGACGCTTCAGGTCGTAGAACCCCTC 105198 28 100.0 33 ............................ GTGCGCGCTGCGGGTGAGCGCGCCCGTGTAGGC 105259 28 100.0 33 ............................ GGAGCCCCGCCATGACCGCTGACGACCCGTGGA 105320 28 100.0 27 ............................ CGACGCCTTCAACACCTACTTAGAGTG 105375 27 92.9 33 ..............T..-.......... CCCGATACAGGCCTTGCTGATGCTGAGCAGCCA 105435 27 78.6 0 .....-A.......T.....C..CC... | C,T [105451,105455] ========== ====== ====== ====== ============================ ================================= ================== 7 28 95.9 32 GTCGTCCCCGCACGCGCGGGGGTAGCTC # Left flank : ACGTCAAACCGGCCGCCCGCACCGGGGATGCCTCTGCCGGGTCCAATCCCTGGAAGGACGGACTTGCCTTGCCGCAGTCGTGAATGCCGCACATCCACATGAACCAGGTGCGTCCCCGCCCGTTGCTGATCTCGTCCAACCGCTTGCGGATCGAGGGCGCCAGGTACTCGTCCCACATCACCCCCGCCACAGCGGCGGTATCCAGCAGATGCCCGATCAGCAGATGAGTCCGCCCGCCGTTCCGCGCGGCGGACTTACCCCACAGCCGCGCCACTCGGGTCACGGTCTCCTGCGGTACCCCCATCGACCGCATCAGGCTGACGACGGACTCCTCGCTACGCACGATGCAACCCCTCCCCGAGTCACTTCTGTCTGCTGACGAGCTGACGAGGTGAAGGGTAGGGGGACCCACTGACAACGCCGGTCGGGGCAGGAAGCCGGTGGTGAACGAGGTAAAGGAAAACGGGCAATCGTGCTAGCGTCACCGCAGGTCAGGAAGT # Right flank : CCCTACGGCACCCGCGCCGTCCACCCCTCCGACGCGAACTTCGTCTCCGCCAGTTCGACCGCGCGGGTCATCTCCTCCTCCGTCGCCGCGCCCGTTGTCAGGCCGTAGCGGGTGCGGAAGGAGGTGATCATGCGGTCGATGACGGTGGCGCGGGGAAGGCCGGTTTGGCGGCGGAGGGGGTCTACTCGCTTTTTGGCGCTCTTGGTGCCCTTGTCGGAGAGCTTTTCGCGGCCGATGCGGAGGACGTCGAGCATTTTGTCGGCGTCGATGTCGTAGGCCATGGTCACGTGGTGCAGGACGGCGCCGTCGCCGGAGACCACGCGCTTCTGGGCGGCGCCGGCGATTTTGCCGGCCTCGGTGGCGATGTCGTTGAGGGGCTGGTACCAGGCCTTGATGCCCATGTCCCCGAGGGCGCCGAGGACCCAGTCGTCGAGGTAGGCGTAGCTGTCCGCGAAGGACAGTCCCTGCACGAGGGAGTCCGGTACGTAGAGGGAGTAAGT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACGCGCGGGGGTAGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCACCCGCGGGGGTAGTTC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 18920-19497 **** Predicted by CRISPRDetect 2.4 *** >NZ_AORZ01000083.1 Streptomyces mobaraensis NBRC 13819 = DSM 40847 contig083, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 18920 29 100.0 32 ............................. CGCCCCGCCATGCCGACGACCGCGATGTCGGT 18981 29 100.0 32 ............................. GTCAGCGACATTGTTTTCAGCGGTGAGCGGCC 19042 29 96.6 32 ............................C GGTCACCTGGAGTGGATCGGCGAGCGGGCCTC 19103 29 96.6 32 ............................C CACGCCGAGCCGTCGACCTCGGACGATTCGGT 19164 29 96.6 32 ............................C CGCCGGTGGTGGTCGGCCCGCTGATAGCGTCG 19225 29 100.0 32 ............................. AGACCACGACCATGTTCGTGGAGGACAACGTG 19286 29 100.0 32 ............................. GACTCCCGGACGAAATCCGCGTCGGTGTCCGT A [19308] 19348 29 100.0 32 ............................. ATGAGCCTCAGCATCAGGACGTCCGCGGCGAC 19409 29 96.6 32 ...T......................... TGGGCGGACCCGGTGGTGCCGGTTGAGGTGCG 19470 28 72.4 0 .....-A.......A.......C..GATA | ========== ====== ====== ====== ============================= ================================ ================== 10 29 95.9 32 GTGCTCCCCGCGCACGCGGGGGTGGCCCG # Left flank : CATCCGCACCGGCAGCCACGAGTGTTACGACCGCATCGTCTTCGACCTGGGAAGCGCGGCGTCCGGGCTGGGGTACCGGGTCGGGTACGTGAACGAGTTCCGCCAGGACGGCTCGGGCGACCTGATACCGGTCAAGGGCGGCGCGATCCTTCAGGTGTACGTCAACGCCCCGAGCTACGACGCGAGCACGGGGCAGCGCACTTACCCTGGCCGCGGCCGCCAGCCGCTGCCGGGCGTCGACCTCACCGGCTACCGCACCTTCCAGGACACGAAGTTCGGCGCGAGTTTTGAGGGGCAGACTCAGGTGGCTGTGGGGGTACGGGCCCGGCTGCCGTTCAAGGTGGAGCAGGTGGGGGACAAGTTGGTGGTGGATGTGGCGCATAGCTGGTGAGGTGGGGTGTGGTGGGCGCGACGGGGTGGGTGCTGTGGCGGCTTCGCCGGACTCTCGGGAAGTGAATGAAAATCCGGGTCAGCCCGGGTAAAACCGCAGGTGGCGAAGT # Right flank : ACCGTCACGATTCCGCGCACGCGAGGTGGCCCGATGGTGAACTTTCACGGGTGCCGCAGCTGGTGGTGGGCCAAATACGCCCCCGACAGGCGTACGGCCCGGCCCGGGTCATCCGGGTTCGCTTCCGGGCGGCGTTTGGTGTCCAGGTGGGCGCAGACCTGGCAGCCCGGGACCGGGGCGGGCATCGCTCGTGGGCCGGAGGAGTGGGGGAGGGGGATCAAGGGGCGGAGGGGGACGTGGGGGCGGGGCATCAGCATGCGGGGCTCCCCGAGTCGGTGTGCTCTCGTGCGGGCTCGGGGGTCGATGTGGTGGGCGGGGGCCGCAAGCGGGAGCCGCGGCTTTCCGCTACCTCCAGGGCGTCGCGCAGACATTCACACAAGAGGGCTGCTGCGCAGCGGAGTTCGGCCTCCGGGGCCGACGGGTCGTCCAGGATCTCCTGGGCGTGTGCCAGAAGGTCCGCGGCTGCGGCGAGGCGGAGCGACTCCACGCCGTCGGCCAGT # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGGTGGCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //