Array 1 1637684-1634831 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP086369.1 Pectobacterium versatile strain A73-S18-O15 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1637683 28 100.0 32 ............................ ACATCGCCGAGGTTATCGTTTACCTCGGCGAC 1637623 28 100.0 33 ............................ AAGCTGGGGGTCATTGTCGCGGCCAAGCGCAAT 1637562 28 100.0 32 ............................ ATCGCTGACAACTTGGTCAGAACGGTGGTCAG 1637502 28 100.0 32 ............................ CGCTGCGCGATAACCTGCCGGATATTATTAAA 1637442 28 100.0 32 ............................ GTCGCGGCGGCATAGCTCACGGCGCGGTGAAT 1637382 28 100.0 32 ............................ TCACTCAACGCATGGTTGACGGCTAGTTGTAA 1637322 28 100.0 32 ............................ GAGAGCGAATCGAAACCATTACAAAGCAACTG 1637262 28 100.0 32 ............................ GGCATGGATGATGCAGCCAGCGCCAGACTTAC 1637202 28 100.0 32 ............................ TGCTGATGGAAGAGACAAAAGCTGACATGGAA 1637142 28 100.0 32 ............................ TGAGCGGCAAAGGTCGCATGAGTAGTGAGCGT 1637082 28 100.0 32 ............................ CGTCGCAATCGGGTATTCCGGTTCATTACGGC 1637022 28 100.0 32 ............................ GTTGCTGTGAATGGCCCACACGGCAGCGGCAA 1636962 28 100.0 32 ............................ AGTTCGCTCATGTTGATAAATTCATCATCACA 1636902 28 100.0 32 ............................ GCTATCAGCAACTGATGGCAATGCGTGAAACA 1636842 28 100.0 32 ............................ ACCAATACCCGTCGCAAGTTTGCTGTATTTCT 1636782 28 96.4 33 .............C.............. CTCCTGGAAACAAGTGATAACAACCTACCATTT 1636721 28 96.4 32 .............C.............. GGCGCAGGGATGGGGTACTTCCTTTTGTCAGA 1636661 28 96.4 32 .............C.............. TGAGTCAGCGATTGCTCCCTTAAGCTGTACCG 1636601 28 96.4 32 .............C.............. TTCGTCGCTCGGTAGCTCACGCGGAGTGCCGC 1636541 28 96.4 32 .............C.............. GTTGAGCAGGCCGCCGATGGCAAATGGGAAGT 1636481 28 96.4 32 .............C.............. TCGACCCCGAAGACGTACCTATCAGTGCCAAT 1636421 28 96.4 33 .............C.............. CCGATGTGGCGCTTATGCTCGGGCCAGCTCTAC 1636360 28 96.4 32 .............C.............. TCTGGCTTGAGTGTGGCGCCAGGGAGCGATGC 1636300 28 96.4 32 .............C.............. AAAGAGAGATGATCTAAAGGGATCGATCCTTA 1636240 28 96.4 33 .............C.............. GTCTTCGATGGCCTTCTGAATCATCTGATCGAC 1636179 28 96.4 32 .............C.............. TTGTCTGTAAGCGTTCGATATCCCTGCACTGT 1636119 28 96.4 32 .............C.............. GAACAGGTTGGCACCGCACAGGTTGGCACCGC 1636059 28 96.4 32 .............C.............. GTCAATTGAAAGTGTGGGCGATGACTGGACGC 1635999 28 96.4 32 .............C.............. AACCTGCGCGGTGCCAACCTGCCTGATCGCAC 1635939 28 96.4 32 .............C.............. GACATGCAAGCACGCCAGCGTGATGTCGCTGC 1635879 28 96.4 32 .............C.............. GCACAGGTTGGCACCGCGCAGGTTGGCACCGA 1635819 28 100.0 32 ............................ CGTATTCGGTTAGTTGGCTGGCGCTGCTTCGC 1635759 28 100.0 32 ............................ TGGAGTGGTCGGAGGTTGATATGCCACGGCGA 1635699 28 100.0 32 ............................ TGAACCGTCGGCAACCAGCGCGGCAGCAATTC 1635639 28 100.0 32 ............................ GCCCAGCGTTACAATTTCGGCAATGTCGTGAC 1635579 28 100.0 32 ............................ ACCAGCAGAATGCGCCACCAGCAATAATTCCA 1635519 28 100.0 32 ............................ CTGTCGGTGATAAACGTCTGCGCATTGTGTTA 1635459 28 100.0 32 ............................ ATGAAGAAATCCGCCACTACATCACCCGGTCT 1635399 28 100.0 32 ............................ AGATGAGGCAACAGAATACGAAAAAACAAGCG 1635339 28 100.0 32 ............................ AGGCACAGACATCGTCATCTGACACCGATCGT 1635279 28 100.0 32 ............................ AATCGCCGCCGCCCACGCCGGAGACGGTTCCG 1635219 28 100.0 32 ............................ ACATCAGATCAACCGGCTCGATACCACGCCAT 1635159 28 92.9 32 ...........C.C.............. AGTCCGATCTTCATCACAGCTGACGCCTCTTG 1635099 28 92.9 32 ...T.........C.............. AGAAGCTATCGCGGCGCGAAACGAAGCGCTTT 1635039 28 96.4 32 ...........C................ TTGATATCACGCTTGAAGTAGCTGACTGGCTC 1634979 28 100.0 32 ............................ TCTGACAAATCATTAGGTGATGTGAACTTTCG 1634919 28 100.0 33 ............................ AATTGCTATTAGCTGGCGGATTGCTGGCATCAG 1634858 28 78.6 0 ...........C.C......T...TCC. | ========== ====== ====== ====== ============================ ================================= ================== 48 28 98.0 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : GCGTGACGGAGGTGCCGGTCCCCAGCATGACAACGCTGGTATTGGCAATGGGGATATTCCAGTACAGAGACTGGTTTCCTTCTTCCGTGACATATTCGACACGGCCACCGTTAACGAGAATGCGGCAATGCTGGAGGTAATAAACATTGGCGCGTTTGGAATGCAGAATGGTTTTTAAGTCCGAAGGGCTAAAGGCGTTATCCATAATGTATTTTCTGCCGCAATCGATAATAGCTGTGACGCCAGCGAAATAAATCGCAAGCTAATTATTTAATAAGAAAAAATGTAATTTTCAGAAAACTAACGGAAATCAGACTATCACAGCCGTATATAAAAAATGATGACTGCAAAAAATATTACCGAGACGCAGACCCTTTTTCTTTGGCCTATTTCACAGGCTTAACAATCAACGAGTTACCGCTGAGCTGAAAAAAAGGGTTTTTGTGGCGAAAACGGCAATTGCTGCTAATAAAACAAATCGTTAGAGTGATCGGGCTACT # Right flank : CGGCCTTAAGCGCTGTTGTCTGGCTATTATCGAGGTAGTACTGCGCCAGCGCTCACCCCCTTAAATAACGCATATTGATGACCTTATTTCGTAACGTTTTTAAGTAATAAGTTTCTTTTTAAGGGAATGCAAATTGTGTATTGGGTATTATTAATATTTAAAAATCATCATTTTTCCGTTAAAGTACCCTTACAGGGAAATAGTTCGTTGACTTAAGTCAAATTCAAGGGAGTGAGTGACTGTGAAATACGATCCGGTTTTAAAAACGCTTGTGGATGATGACTATCGGTTAGAAGATCATCTTGATTTTAAAAAGCAGCATGCAGATATTAACTATCAGAAATTACACGCACAACTAAATGAAATAAATAACGATAACATTCATGCCATATTGACTGCGCAGGAAGCGACGTATTTTTTAAAGACGTTATGTACACCAAACCCTAACGAATCGTGGAAAACGGCGATATTTGGCTGTACCGATCCTACTTCATCGTTTG # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.93, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1646640-1647987 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP086369.1 Pectobacterium versatile strain A73-S18-O15 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1646640 28 100.0 32 ............................ TTATGTACTCAATCATAATTACCTCGGCGGCG 1646700 28 100.0 32 ............................ TGAGGGCGTGACAGCCAATGGAAAAACAACAC 1646760 28 100.0 32 ............................ ATCAGGGAGGTGGAGATATGAAAATGCAAAAC 1646820 28 100.0 32 ............................ TCTGAAACTGGATCGTATCAAAAAGGGGCAGT 1646880 28 100.0 32 ............................ AGTCCGGCCAGTGCTGCCGCACCACCTCCCAG 1646940 28 100.0 32 ............................ GTGATACGTTTCATTTCTAACTCGTCATGCCA 1647000 28 100.0 32 ............................ GAACGGATCATCCATCAGAATGTTTGCCAGAA 1647060 28 100.0 32 ............................ CTAGTGTTCAGGGCGCAGGCACTCCGAACGAT 1647120 28 100.0 32 ............................ AGATAAAGTCTTTGAGGTTTCAACGCCGCAAG 1647180 28 100.0 32 ............................ TGATCCGCAGCGCAAGCGCTGACATAACGCAT 1647240 28 100.0 32 ............................ TAAGATACTTCTCCACATATTCATCCAGTTCT 1647300 28 100.0 32 ............................ GACAGGTGGTTTTTTTACGCCTAAATTCAGGA 1647360 28 100.0 33 ............................ AGGCTGCAAAATGATGGTGCAGACTTCCAGCGG 1647421 28 100.0 32 ............................ TTAGGCTTTGGCCCCGGCTTCTTGCGTTGAAC 1647481 28 100.0 32 ............................ ATTATCGGCAACCCAACTATTCGTCAGGGTGC 1647541 28 100.0 32 ............................ GGCATAAACGGCGGGGTGTAGACGGTACGCCC 1647601 28 100.0 32 ............................ TGTCCAGTTTCCAGCGCTGCAACACGCACTTC 1647661 28 100.0 32 ............................ GCCTGACCCCTAGCGCGATATCAGGAAGTATC 1647721 28 100.0 32 ............................ CACACACCAGCATGTGTCAGCGCATCAAGTGG 1647781 28 96.4 32 ...........T................ ATGACTGATAATGCGCTGGCTGGGGTATGGGG 1647841 28 92.9 32 .G.........T................ CCCGATGCACAGATGTCTGCTGAGACACAGGA 1647901 28 85.7 32 T.........T..CG............. GTTTTGGCTTAGTTATCATCCTGATAAGTTTG 1647961 27 71.4 0 ...........TGC......-..C.GGG | ========== ====== ====== ====== ============================ ================================= ================== 23 28 97.7 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : AGGCGCTCTCTACATTAGAGCAAACGGCCTGGCTGAAAGGATTGCGGGATTACACGCAGGTTTCTGAGTGTAAAGCCGTACCTAACGGTGTGAAATTTCGCACCGTGCGCCGCGTTCAGCTCAAGAGCAGCGCCGAACGGTTGCGCCGACGCTCGGTCAGCAAAGGCTGGCTAACGGAAGCGGAAGCCGCAGCACGTATCCCCGATGCCGTGGAAAAACGCAGCGCACTGCCATTTGTGCAAATCAAAAGCTTGTCCAACGGGCAGATGTTTTTCGTGTTTGTGGAACATGGCCCGCTACAGGACGCCCCTGTCGCTGGCCGCTTCTCTTCCTACGGTTTAAGCGCAGAAGCCACCGTTCCGTGGTTCTAACCCTTTTTTAGCGGCCAACTGCAAGCTATTGATTTTTAATTGCAGTTGGTCACCCTAATAAAAAAGGGTTTTTCGCCAAAAAAGTCATATTCTCTTTAACAATCTGGTGGTTAGCGTAAAACCTTAACG # Right flank : GCTTATCAGGATGCGTCGCTGACGCGACGCATTTCGTGGCGTTATTCCCCGTTGAGCGTGACAACCAGCGAGCGGCTGCCGCCGTGGTTGCGGTGTTCGCACAGGTAGATACCCTGCCAGGTGCCGATGTTCAGGCGTCCGTTGGTGATGGGGATCGTCAGACTGTTGCCGAGCAGGCTGCCTTTCAGGTGCGCGGGCATGTCGTCGCTACCTTCATACGTATGGCGGTAGTACGGTTCATCCTCCGGCACCAAGCGATTAAAGAAACTCTCGAAATCCTGCCGCACCGTAGGGTCGGCATTCTCGTTAATCGTTAGCGCCGCCGAGGTGTGTTTGATGAACACCTGCATCAGCCCGACGTTTATCTGACGCAGTGCGGTGACCTGCGCCAGTATTTCGTCGGTCACCAGATGGAAGCCCCTGCTTTTCGGCTTCAGGCGGATTTCATATTGCGTCCACATCGGCGTCCCCTGCTATCAGGCTTCACGCGCCAGAATAGG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 3060936-3061696 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP086369.1 Pectobacterium versatile strain A73-S18-O15 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3060936 29 100.0 32 ............................. ATAGCTAATCTGCCGTAGACCCAACTTCTAGT 3060997 29 100.0 32 ............................. AGCGGGTGTTGCTATTTCTTGCCGCTAGGGAA 3061058 29 100.0 32 ............................. CGTTGTAGGTGGTGTTAAATGCCATAAGAAAT 3061119 29 100.0 32 ............................. CTCACGGATGATTAACGTGTATGATTTTCTGC 3061180 29 100.0 32 ............................. TAACCAGAGTCATTAGGCCGCTGCCTAGGCTC 3061241 29 93.1 32 .....T.............A......... GAATTACGCGCTCAGGGGACTACGCCAGACGC 3061302 29 96.6 32 .A........................... TAATGACCGGGTTTCGGATTGCCGGGGGTGTC 3061363 29 96.6 32 ............T................ AACCTGTCATAGCACGCAAGGCGCTTTGTCCC 3061424 29 96.6 32 ..........T.................. ATGCGTATTGCTGTGGCAAACGGTATTACGCT 3061485 29 89.7 32 ............TG..T............ GACACCGGGCAAATAGAGCAGAACTGTGATGT 3061546 29 89.7 32 A.......T.......A............ AAGTCGTTACGATTGCCGCCCCATGTTCCCGT 3061607 29 100.0 32 ............................. TTTTCAGTCAAAGCGCGTGATGTATATATCGA 3061668 29 93.1 0 .............T.............T. | ========== ====== ====== ====== ============================= ================================ ================== 13 29 96.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGATTGAGGAAGTCTTGTCTGCGGGTGGCATTACGCCGCCGCTACCGCCGGACGATGCACAGCCTCCGGCGATCCCAGAACCGAAACCATTTGGTGACAGCGGCCACCGGGGGCAGGGTTAAATGAGCATGCTGGTGGTTGTGACGGAAAATGTCCCGCCGCGTTTGCGCGGCAGGCTGGCAGTGTGGTTGCTGGAAGTCCGCGCAGGCGTGTATGTCGGTGATACGTCACAGCGGGTAAGGGAGATGGTCTGGCAGCAGATTATCGAACTGGCAGAACAGGGCAACGTGGTGATGGCGTGGGCGACGAATACGGAATCCGGCTTTGAGTTCCAAACCTGGGGCGAAAACCGCCGAATGCCGGTAGATCTGGATGGTTTGCGGTTAGTCTCTTTTTCACCTATTGAAAATCAATAAGTTAGCGATCTTTAACAACATGGAAAAATCGGTAGAATTTTTTATGCCGAAAAAAGTGTTATAAAACAACTCTCTACTTTTAGA # Right flank : GATGTGAAATGTAAATTACACATGTTTCCATATTGTCAACTCGTTCTGTTTATGGCATGGTGTTTCCAATTTGGAAATACTAGGGAAGGCATCAGAATGCATGTTATTTCGCGGGCACCTTTCGACACTGCAACCACTCAGTTTCCGAATCAGGCGGCAGCACTTGATGACCTATATCGGGTTATCAAACGCGAAATGTATGCAACGCCGGACGATATGAAAAAACGCTTCCCTAGTCTAGATAGGATGAAATATCGGGAAAAATGGTGGGTTATTGATATTGGTGGCGGGCATCTTCGAGTGATGTTTTTTGCTGATTTTGAGCGAGGGAAAATCTTCATCAAGCACATCACATCCCATGCAGAGTACGACAGGCTGACAGAGTATTACCGGAGGAATAAAGAATGATGTACGCCGACGCCATCAAGGCAGCTAACAACCTGACGAGTATCGTACCATTCCTCGGAGGCAGCACCTCTCGTAAGGATTATGAGGATGCA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 3063908-3064667 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP086369.1 Pectobacterium versatile strain A73-S18-O15 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3063908 29 100.0 32 ............................. CGCTATGGATTCGTCGGGTATGAACCAGAAGC 3063969 29 100.0 33 ............................. GGAGCTTATGAAACTCGATGTTTCAAACCCGCA 3064031 29 100.0 32 ............................. CCAGGAAGAGTAAGAAAAATAATTGAATGTAA 3064092 29 96.6 32 A............................ GGTTCCTGCATAAAACACTGTAGCTGATCGTT 3064153 29 100.0 32 ............................. CCGGAAAAATCGGGGCCGGGATAACCAGCGCG 3064214 29 96.6 32 ............................C GGCTATCTCAACGCGTCGTTAGTCGTGCTGAG 3064275 29 100.0 32 ............................. CAAGAGCCGGATTTATACCTATGTCCGGTAAC 3064336 29 96.6 30 .....................G....... TCCTCTCGCAGATGCATACCATCATGGCAT 3064395 29 82.8 32 .A......T....C.........GG.... AATAATGATGTTTTCGGAGGGGGTTCGGGGAC 3064456 29 96.6 32 ..A.......................... TGAGGACCGTAATCCGTCACCAAATCACTATA 3064517 29 96.6 32 ............T................ GATACAGGGCAAATCGAACAGGACTGTGACGT 3064578 29 89.7 32 .......T..T..C............... TGCATGGGGCTGGTAAAGGATTGGGAATTGGC 3064639 29 93.1 0 .............C.............T. | ========== ====== ====== ====== ============================= ================================= ================== 13 29 96.0 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : CCTCTGCTAATTATTTACTGCGTTACTTTACAACGACGGATATGAATTGATTTTTTCCAATTCATGTCAATATACTTGTAATCATTAGATATAGTGGATGAAAAATATTGGCATTTACAGGTTATATCGATATTCGGTTGAGAAAGAGTATTTTTAACGGGGAAGATTTTTACCGAGAAATAGAAATAAAAACGCAGTGGTATAACTCTTGCCGCAGTGTGCAGCGTTTAATTCAGCAACTGAACGTTTTCCAGATGTATGAAATCAAACCGGCAGATCAGGGAAACGTGGTGATAGCGTGGGTGAAAAACACGGAATCTGGTTTTGAGTTCCAAACCTGGGGCGAAAACCGCCGAATGCCGGTAGATCTGGATGGCCTGCGGTTAGTCTCTTTTTCACCTATTTAAAATCAATAAGTTAGCGATCTTTAACAACATAGAAAAATCGGTAGAATTTTTTATGCCGAAAAAAATGTTATAAAACAAATCTCTACTTTTAGA # Right flank : GGGCTTATACCCCTTGTTGCATGTTGGTCTAAATATCCCCTGCACGGGAGCAAATCCCGCTTCTGGCTGGCGTGATGGGGGATTGCGTGTCAGTATTAAAGCACGCCATTTTTTGTGCTCACCGTCATGGTGAGGCGCTATGCCAATGATTTTTGTCTTCCATACGCTACCGTAAGGAGGTGATATGAAAGTTGAAGCCGCAGAGTCGTCCGTCTTTGCCAGCCAGCAGGTGATGGCGAAGCGTTCTACCGAGCATGCAGAGAAAGCGGCGTTGTCCGAACAGCTTCAGTCTTATCAGGCGGGCAGCGGTGCCGTTCCTGCTGGTCAGACGACACGGTATGATTTCACCCGCATTAGCCCTGCTGAACTGTATGAAACGGTTGAAGGCCTTGTCAGCAGTGGTCGGTTGGGACGTGAAGAAGGGTCCGCGCTGCTGGGTTTTGTCTCATCGCCGAGAGCCGAGGGGGGAAGCATTCCACCTTCCAATGTGTTCCAGCCGA # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //