Array 1 68590-69411 **** Predicted by CRISPRDetect 2.4 *** >NZ_NBIP01000008.1 Cutibacterium avidum strain CI882 CI882_c9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 68590 29 96.6 32 ............................T ACCGGGTAGAGGTGTGCATGGGCATTAATCTG 68651 29 100.0 32 ............................. GCCCGCCCGGCCCGCCCGGTCCACAAGGTGTA 68712 29 100.0 32 ............................. ACGGTGCACGATACTACCGGACAGCTTAAATA 68773 29 100.0 32 ............................. ATTAATGACCTCCCCGAGGTGTTCATTGAGAT 68834 29 100.0 32 ............................. CGCGGCACCATCGACGACAAGCCTTCCAGTGA 68895 29 96.6 32 ............................T TTGAGAATAGTCTCGCTGAGAGTGTTATGGCC 68956 29 96.6 32 ............................T TCGTTGAGGACGTTTTCGTTTCACTCGACGCA 69017 29 100.0 32 ............................. GGCATTGGCGACTTCCCGATGTGGAAGTTCAC 69078 29 96.6 32 ............................T TTGCAGTCAAACTATTGGCTGCACCATCACGA 69139 29 100.0 32 ............................. ACAAGACCGCGACGTCCATTGAGGCTGGCGGT 69200 29 100.0 32 ............................. TCGGTCAACTATGATCTTTTGATGATGTCCAA 69261 29 100.0 32 ............................. GCGCTTCCTGCCAGAAGCTAGACGCCGCACCG 69322 29 100.0 32 ............................. AGGCGGTTGCGTCCGGTGGAGATGCTCTTGTC 69383 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 14 29 99.0 32 GTCTTCCCCGCCTACGCGGGGGTGAGCCG # Left flank : GACGCCCCCGGAGATCCCGATGACGGATACGGGTGGGATGTTGTCGACCTGTGGGACGACCGCACTGGCACGGTCGCCGGCGGAAGATCGTGGGCATAGCCATGGTCGTGCTCGTCCTCACCGCCTGTCCCGCGGGACTGCGTGGCCACCTCACGAGGTGGTTGCTCGAGATCAGCCCTGGGGTGTTCGTCGGGCATCTGCCTGCACGGATCAGGGATGCCCTGTGGAGCCGAGTCGTTGAAATGTGCCACGACGGGCGGGCGATCCTCGTGTACTCGATGCGCGGCGAGCAGCATTTCGAGTTCCGCGTGCATCGACATGACTGGGACGTCGTCGACTTCGACGGGCTGAAACTCATGCAGAGGCCAAACAATAGGGCACACAACTCGACACTGCGGCCGGGATGGAGCTCGGCTGCGCGGCGACGTAGGACGGCCAAGCGCTAGATCGAGTACACTTGTATCTGGGCAAAGCTCCTGCATCAACCGTAGTCGGCTGGT # Right flank : GGAGGTCAGCATGGCTGACCTTGTGATCCAGGCGTTGCAGTTGGCGACAGCGGTCGTCAACCTCGCAGCCGCCGTGATTGCGGTGCGCACGCTCCGCAAAGAAAGCCGCCCCCGAGGGACAACTCGGAGGCGGCGAGGCGGCAAACGCCGATAACACAAAAGGGGGACCCGGTTCCACAGAGGGGCCGGGTCCCCTCCTTCCACGAAGTATACCTGTCTGCGCGGGCCAGGAGAAGGGGTCGCCGGTACGCCGATGAAGCGCTTAGGTCGTCTTCCCCGCCTACGCGGGGGTAAGCCGGGGTTTCTCACTCAGATGAGGAGGGCGAGATGAGTGAGTTTGTTGCCGACAATGGTGTTGGAGTGACCGACGAGATGGCTCGCCAGTGGGCGAGTGAGGCTGAGTCGGGTTTTGAGGGGTTGCAGGTCGAGCCGTTCGAGGGTCGAGCTTGGGAGGACGTGGAGACTGACCCCCTGGAGCCTCGCACGATCCGGGTGAGTGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCCTACGCGGGGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCGCCTATGCGGGGGTGAGCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 523-6 **** Predicted by CRISPRDetect 2.4 *** >NZ_NBIP01000041.1 Cutibacterium avidum strain CI882 CI882_rep_c44, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 522 29 96.6 32 ............................T ACCGGGTAGAGGTGTGCATGGGCATTAATCTG 461 29 100.0 32 ............................. ACGGTGCACGATACTACCGGACAGCTTAAATA 400 29 100.0 32 ............................. ATTAATGACCTCCCCGAGGTGTTCATTGAGAT 339 29 100.0 32 ............................. CGCGGCACCATCGACGACAAGCCTTCCAGTGA 278 29 96.6 32 ............................T TTGAGAATAGTCTCGCTGAGAGTGTTATGGCC 217 29 96.6 32 ............................T TCGTTGAGGACGTTTTCGTTTCACTCGACGCA 156 29 100.0 32 ............................. GGCATTGGCGACTTCCCGATGTGGAAGTTCAC 95 29 96.6 32 ............................T TTGCAGTCAAACTATTGGCTGCACCATCACGA 34 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 9 29 98.5 32 GTCTTCCCCGCCTACGCGGGGGTGAGCCG # Left flank : CCTCACGAGGTGGTTGCTCGAGATCAGCCCTGGGGTGTTCGTCGGGCATCTGCCTGCACGGATCAGGGATGCCCTGTGGAGCCGAGTCGTTGAAATGTGCCACGACGGGCGGGCGATCCTCGTGTACTCGATGCGCGGCGAGCAGCATTTCGAGTTCCGCGTGCATCGACATGACTGGGACGTCGTCGACTTCGACGGGCTGAAACTCATGCAGAGGCCAAACAATAGGGCACACAACTCGACACTGCGGCCGGGATGGAGCTCGGCTGCGCGGCGACGTAGGACGGCCAAGCGCTAGATCGAGTACACTTGTATCTGGGCAAAGCTCCTGCATCAACCGTAGTCGGCTGG # Right flank : GACAAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCCTACGCGGGGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCGCCTATGCGGGGGTGAGCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //