Array 1 342843-340734 **** Predicted by CRISPRDetect 2.4 *** >NZ_PISA01000002.1 Campylobacter concisus strain H9O-S1 NODE_2_length_372594_cov_73.3919, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================================== ================== 342842 33 100.0 44 ................................. CTCATAAGTTGGAAGCGTCCAATTTTATTAGCGAACACGAATTA 342765 33 100.0 29 ................................. AAAAACCCAATCTCAACACTAGAGCCTTC Deletion [342704] 342703 33 87.9 44 AC..TT........................... GCAAAGCACCAGTGTTCTTCATTGATGAGAACCATGCTGAATTA T [342699] 342625 33 100.0 49 ................................. TTCAATAGCTCTCTTGCATCATCCACCGAAATGGACGAAAGGCGGATCT 342543 33 97.0 44 ....T............................ AAAATAAAACCAGGTTCAAAAAAGTGTATTTTTGTGCCACATTA 342466 33 90.9 41 ....T........TT.................. AAGTTCATCGTTCATGATGAGGTTCACGTTCTCTCCTATCC 342392 33 97.0 51 .............T................... TTAGGTCTAGTCTGGACTACATCAGTGAACTCGTCGTCATCAATGTAATCC 342308 33 100.0 46 ................................. TTTGGGAGAGAAATTTTTGTAAATTCTAGTTTTTTCATTTGCATCC 342229 33 97.0 41 .......T......................... AGGGTTATGCTGAAATAATCAGCATCGTTCTCATCAAATTA 342155 33 100.0 53 ................................. ACAGATTCCCTGACAGAAAACGTTGAAAAAACGTTTCCTTGACCTGCAGATTC 342069 33 97.0 45 ....T............................ ACCGAAACGTTGCCAATTCTCATCAGCTACCTCCTCGTATTATCC 341991 33 100.0 46 ................................. GTTTTAACAGATGGATGGCACTCGTAGACAAACTTCGTTTTGATTA 341912 33 100.0 41 ................................. AGGGTTATGCTGAAATAATCAGCATCGTTCTCATCAAATTA 341838 33 100.0 43 ................................. ATTATATCGTTTGCTCTGCTGAAGGCATCTTTTTGGGACATCT 341762 33 100.0 46 ................................. TTTTTAACCCTTACAAAGAATGTTAGCCCGTTAATCGAGCGCATCT 341683 33 100.0 46 ................................. AAAGCTGCGCTGAATTTTAGTTTTGGAGCTGTTTTAGCAGGTATCT 341604 33 97.0 40 ..........C...................... CTGCTTCGGCTTTTTCTTCTATAAGGTCTATCTTCAATCT 341531 33 100.0 42 ................................. TAAAATTACTTTGTTAAACATCTTTTTTCCTTTATAGGATTA 341456 33 90.9 46 ..............A......T.........G. GCTATATACTCCCTTTGAGCAAAATGCTGGATAGATAATTTAATCT 341377 33 100.0 46 ................................. ATAAATCTCGCTTTGTACCCATTCTCTTGTATGGCGGTTATGATCT 341298 33 100.0 42 ................................. TTAAAGCCGTTAAAAAACAATTCCAAATTTAGCCCTCTATCT 341223 33 100.0 43 ................................. TAGAATTTAGCCTATCTCTTTGCGCAATTAACGAAAATAATTA 341147 33 100.0 47 ................................. CGAATTTTCTTTTTACTCTCTAAGAAAAAAACACTTATATTTTATTA 341067 33 100.0 44 ................................. CCGATTGTAACTGCCATTGGTTACTCCTTATGATTTTTAAATCT 340990 33 100.0 39 ................................. CAATAGAGGTTTAACCTAACCAAAGTGTAGTCACAATCT 340918 33 97.0 45 .....G........................... AGCTTCATGAAGCTCAGCCTTAAACACACGCTGCGAGTAGTATCT 340840 33 100.0 41 ................................. AAAGCTTCATATCCTTTACCAAATTTACAATCCTCGTATTA 340766 33 93.9 0 ............................T..G. | ========== ====== ====== ====== ================================= ===================================================== ================== 28 33 98.1 44 GATACAAATTTCCCCGATCTAGGGGATTGAAAC # Left flank : CTTTCAAACATCTACCTTGATCAAATGGATAAATTTCTCGAGCATAGCGGTATAGAGTTTGTAAGATACGCAGATGATTTTGTACTCTTTTTTAGCTCACGTGAAGCCTGCGAGCAAGGGCTTGCCAGACTAAAGGACTTTTTAGCAACCATAAATTTATCCCTAAACAAAGCCAAGACATCTTTACACAACAAAGATAGCGAATTCACCTTTCTTGGCGTAAATTTCAAAGCTCACGAGATAAGCATAGGCGAGGATAAATTTGCACGCATTTTAGCAAAACTCACAGCCTCGTCCAAAAAGCCAGACATCACCCAAAGCGTAGAGAATATAAATGCCCTTAAATTCGCTATCTTAAGCTATCTATAAGCAAAAGAGTGCGAATTTGAAAAATTCTTTTAGCCACATTTTCGAACATTTTGCCATTTGTGATATAATGCCGGCAAAGAGTAGTTCTTTTAAAACTCATTGTTAATTCACAATCGTTTTTTAGGCTATTA # Right flank : AGGCAGGTGCATCTAGCATAGTTCTCAATCATTAATTTATAGATATATTTCATTTTAGTTATTTTTTAGCTGTTATATAAAAAAATAATCGTCATATTGACTATATATGACAACGAAACTTTTTATAATTGCCTCCGAAGTTGATGCTAAAGCGTCAATAAAAAAATTAAGGAGTTTTTATGAAAAAGATCGCATTATCTTTAATGGTTGCAGGAGTTGTAAGCTCTGCTTTTGCTAGTGAGGCTGCTAATCTAGCTAATATAGCACCTACTAATCACGACAAAGTTGCCATCGCGCTAGATGCTTACTACAAAGGTACTGACATATGGGGCGCTTCATCTTTTGCTCTTGGCTTTGATGGCAAATATGGCTTAGTGCAAGCTGCTAATGGCGAGCTATACTTCCGCTTAGCAGGCCATGCTGGCGTTAGAAGCAAGGATGTGCATAGATTTCTCGAGATAGGTGGCGGACTTGGCTGGTCTCAAAAGCTATCTGAAAAT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAAATTTCCCCGATCTAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.58%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.60,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : NA // Array 2 364731-366962 **** Predicted by CRISPRDetect 2.4 *** >NZ_PISA01000002.1 Campylobacter concisus strain H9O-S1 NODE_2_length_372594_cov_73.3919, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 364731 37 100.0 36 ..................................... ATTTAACTGCGGTGAAAACAGTTGGCTGGCAAAATC 364804 37 100.0 39 ..................................... AGTATTTGAGGATTACGTTTGCAACATCTGAGAGATACT 364880 37 100.0 38 ..................................... TCTTTGCCGCAGAATTTAACTGCGACAAAAACTGTTGG 364955 37 100.0 41 ..................................... GCTTACTTCTCTTTCAAAGACAACGTGGTTGCCTTCAATAC 365033 37 100.0 35 ..................................... TTGTTACCATAGACAACGAAGAGTGCTCTTTCATT 365105 37 100.0 41 ..................................... CTAATGGGTTATATCCCACAGCTTCTATGGCTCTGCGGATA 365183 37 100.0 36 ..................................... ACCTCTGAGAGCCTATCTAGGTGGCAATGCACCATA 365256 37 100.0 41 ..................................... CTAATGGGTTATATCCCACAGCTTCTATGGCTCTGCGGATA 365334 37 100.0 36 ..................................... ACCTCTGAGAGCCTATCTAGGTGGCAATGCACCATA 365407 37 100.0 41 ..................................... CTAATGGGTTATATCCCACAGCTTCTATGGCTCTGCGGATA 365485 37 100.0 36 ..................................... ACCTCTGAGAGCCTATCTAGGTGGCAATGCACCATA 365558 37 100.0 38 ..................................... TCACTACCATCGCCGCACGATATTTTACCTACGACGTC 365633 37 100.0 34 ..................................... ACTAGCTACCCAAGCTAATACAGTAGCATTACCA 365704 37 100.0 37 ..................................... GTTTCATCCTCTAAGAATGAACCTAACCTTGCAGAGC 365778 37 100.0 43 ..................................... AATCTCACAGTGGCATTTGGGTTTAATGCCAAACTGGCATCTT 365858 37 100.0 42 ..................................... CTTCTTTGATATAGGCTGTGATGTTCTCAGTTTCACGACCTT 365937 37 100.0 38 ..................................... AATCTTAGTAGGGATAGCTGGTTTCAAGAAGTTCTTAG 366012 37 100.0 36 ..................................... TCTTGTAGGCTTACCTCTTTATTGAAGACAACATGG 366085 37 100.0 35 ..................................... TCCTGCACCATAACTGGACAATGAGCGTAGTGTCC 366157 37 97.3 41 .....................A............... CCAACCGTCTATGTCAGCCAGCATAGCATCTATGTTGTTAT 366235 37 97.3 38 .....................A............... AAGATTCTTCATTAATCTCTAACTCGTTTATAGCCTCT 366310 37 97.3 38 .....................A............... AAGATTCTTCATTAATCTCTAACTCGTTTATAGCCTCT 366385 37 97.3 36 .....................A............... ACTCGGTAAGGCATGAACCTCTCACGATCAGTATCG 366458 37 97.3 40 ....................T................ CATTTTCTTGCTCTTAGAAAAATCACGATAGGGCATAAAA 366535 37 100.0 39 ..................................... AAAAGTAGCTTTTTCATTGTACTCCTTTCATAAAAATAA 366611 37 100.0 40 ..................................... AAACTCAGGATATGTATCGTCGTAAGTTAACGCTGGTAAA 366688 37 97.3 40 ......................A.............. AGTCTTGATGGCTAAAATAGTTTCATCCTCTAAGAAACTA 366765 37 100.0 42 ..................................... TGTTTTCGTAGACTTTTCTTTCGTCCATACCTTTGATACCGA 366844 37 97.3 42 ......................A.............. TGATTTGTTACGTTTCTATCTGCAATAATGGGAGCTTCAAGC 366923 37 97.3 0 ....................................T | C,AA [366953,366955] ========== ====== ====== ====== ===================================== =========================================== ================== 30 37 99.3 39 ATTTAAACAAATTTGACCCGATCAAGGGGATTGAAAC # Left flank : GCTTTGAGCTATGCGATAAAAAAGGTATCTTTGAGATGCAAGAGCTCTTTGTCTAGCTTATGTCGTTCTTAAATTTCTTTTGGATTTTTGATTTGCGAACTTTTTTAGCTGAAATTTGACCCTTTTTAGCTAAAATCTCGCGAAATAGGTTCGCAAATCTAGTTTTTTCAAAATATCTCTCATACATTTGCGAACTTTTAGTTATGCCTAAGTTTAGGATAGCCTATTTTAGGACCTTGCGAAACTTATATACCGCTTAAAGTTCGCAAACCTATAAAATTTGAAATTTTTAAAAGAGATTTGCGAACTTTTTTAAGATGACAAATACCTAAATTTAGGGGTTCTTTTACTTATCATTGTTAATTTTATGGAGTTAGTATTTTTAAATACCTATACATTTGCGAACTTTTTTGAGATTTTCACGAATTTTAGGTATCTTTAAAGCCGGTTTCTTAAATAATTTTGCTAATTTTTCCTTTGCAAAAATAGTCTTTTAGGCT # Right flank : TTTGGTAAAGTTGTAGGTAGTGGCTTATATTATTATTTGTAAAAATAAATGAGTGATGCTTATATGCGTTTATTGGATAAATTTGGATAAGAACAGATTGGCTTAGATTTATGAAAAACTACAATAAAGATAGGTTTTTGTGATTTGCGTAGATAAATAAAAGCTACGAAAACGAGCCATGAATTTTGCTTCATGGCTGCATGGGCCAACTATTTAGAAGTTGGCTTCATGCGAAATGTGCCCTTAGTGGTTTGGACTTTGGTATAGCCACCAAAGCTTTGACCCACTTTTTGACTAGCACGAGCAGATGAGTAAGATCTGCTTGAAGATGATGAAGAATAAGAACGTGAATAACCTTTTGCCATTTTGGCCCCCTTGTGTTGAATTATTTTGTTTTGTTGGGAGAATTATAAAAGAGTGTATGGACATATTGTGTATAATTCATAAAAAACTTTAGAGAATATAAAGGATAAAGTAATGGACGCACAAACCAGGATACT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAACAAATTTGACCCGATCAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 8736-12838 **** Predicted by CRISPRDetect 2.4 *** >NZ_PISA01000009.1 Campylobacter concisus strain H9O-S1 NODE_9_length_55337_cov_61.6339, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 8736 30 100.0 34 .............................. TGCTGAAAATCAAAAAATACTTAGTGAAAACTCT 8800 30 100.0 35 .............................. CCACTTCTTGCGGGCAAAGTAGAAACATATTCATC 8865 30 100.0 34 .............................. TCATCAGTAACAAACATAAAATCAGCAACATGAT 8929 30 100.0 38 .............................. CTAGTGGCAAGATTGAATATAGACTTTACAAGGATGCA 8997 30 100.0 34 .............................. CTTGAGCTCCCTCATTGAAGCTACCTTTGTTTGT 9061 30 100.0 37 .............................. GAGTTATCATCAAAATATATTTTTCTTACACCACCTA 9128 30 100.0 34 .............................. ACCCTGTGGTAGCTACAAGAGAGCTAGGGCTCAT 9192 30 100.0 36 .............................. TACAATAGGCGCTAGCGGTAGAGGTGTATTTACGGG 9258 30 100.0 36 .............................. AATTTAGAGTAATTGCCATTTAAAGCACCCCTAAAA 9324 30 100.0 37 .............................. GAAGTCTCCAAGATGGGTCAAGATGATACTCAGCATA 9391 30 100.0 35 .............................. CATTTTAGGAAAGGTTAGAAAAATGACACTTGGTG 9456 30 100.0 35 .............................. CATTTTAGGAAAGGTTAGAAAAATGACACTTGGTG 9521 30 100.0 35 .............................. CGGTGGCGTCCGAAACAGCGGCCATTACCGCATTA 9586 30 100.0 37 .............................. TCTCTGCCTGCTACCATATCAGCAATAGCCCAGTCGC 9653 30 100.0 35 .............................. TATGTTGCCCCTGCTGGCACAACCGCACAGACATA 9718 30 100.0 34 .............................. CTGGTAAAAGTCAAGCAGGTCATAAGGCTACATT 9782 30 100.0 34 .............................. AATACTTTCAAGGTTTCTCTTGCTCTTAGTGGGT 9846 30 100.0 36 .............................. AATTTATATGGTTGTGTATTCGTCCTTGACGAGTGC 9912 30 100.0 34 .............................. CTTCATCTTGATAAATAAAGTAGTATTCGCCTTG 9976 30 100.0 36 .............................. CTTATCGTTTGTCAATAGTTTTGATATGGGATTGAT 10042 30 100.0 37 .............................. GAATAAATAAAATCTACATCTATCATCTTGATAAATC 10109 30 100.0 35 .............................. TTAGAGATGAAGTAACTGGGAAAACAAGAGAAATC 10174 30 100.0 35 .............................. CGGGGAGTTGCAACCAAAGTGGCACGCTAACTCTA 10239 30 100.0 36 .............................. TTGCTCCAGGGCAATGGCGTGGCGATCCAGTTGGCA 10305 30 100.0 34 .............................. ATATCACACAAGCCGAAATAATTCAAGCAAAAGA 10369 30 100.0 35 .............................. CCGAATACGTGCTAATGCCGATGATAATCGCCATA 10434 30 100.0 35 .............................. TCTGCTGTGTCGCACTAAATGCCACATCTGATAGT 10499 30 100.0 36 .............................. TCGATCGCAAATGAGCTAAACACATTAACGCGGTTT 10565 30 100.0 34 .............................. GAAATAGGTAACAGCACGCAAAGCATAGTAATAG 10629 30 100.0 36 .............................. TCTTGCCTATCGTATCGCCTGCACTCTCTGCTGTGA 10695 30 100.0 35 .............................. ACAGGCTCTGCTATCCAAGCAGGAGGGATATGCCC 10760 30 100.0 36 .............................. TTGAAATTTTAATAAATCTTTAAACTTATTTTGATA 10826 30 100.0 36 .............................. CTCCCTCACCCCTGTAATTTCGTTTTTGCGCCGTTA 10892 30 100.0 35 .............................. AGTGGCGCAATGGTTGGGCTAAATGAAGACTTTGC 10957 30 100.0 38 .............................. GGCGAAAGGGGGCTTTTATGACCCAGCTGGCTCGTTTG 11025 30 100.0 39 .............................. CCACATTTTTCTACCTCACTGACGGGGTTATATTTTGGC 11094 30 100.0 35 .............................. GGAGTAGCTCAACAAGATGCGATAAGAAATATCAC 11159 30 100.0 38 .............................. GGGCGTGGCGTATATAGTTTTCACACTCAGCGATTTCG 11227 30 100.0 35 .............................. ATTGCCACTTCAACAAATACACAAAAGTGATCTTT 11292 30 100.0 37 .............................. ATATAACCACCAATAGAACCGTCAGTAGAACCATCAA 11359 30 100.0 34 .............................. CATTAGCCGATAGCGTTTCAAGCTTCATCAGGCA 11423 30 100.0 36 .............................. TCAAACATAAACCCAAAGGCTATCTGTCTTGATATA 11489 30 100.0 36 .............................. TGTGTAGTTTCAGCCATAATAAAAAGCTCCTTCTAA 11555 30 100.0 37 .............................. AGCATTGGGGCTGATACGCCATATCAAGAAACCCTAA 11622 30 100.0 36 .............................. CTAGGTAATGCTAAAGACAATCCTGAGCCAAGTCAA 11688 30 100.0 37 .............................. TAAACCTTGTAAGTGGTGGTAACGGAGACGCTAAAGA 11755 30 100.0 38 .............................. GCTATCTACCTGTGCCTCTTGATGGCTCTTGCAGTGGC 11823 30 100.0 36 .............................. TGATTGTTTTGTTTGAAGTCATAAAACACCTCCTCA 11889 30 96.7 37 ..................A........... TTTCATCTCTTTTATATAGTTTGCTTCGTGGTGGTTC 11956 30 100.0 36 .............................. TCCTTTCTCGTTTGCAGAGCTTTCCAAAAGCTTGGC 12022 30 100.0 36 .............................. AAATACATTCTAAAAGGTGGTCTTGTAAGAAGTTCA 12088 30 100.0 37 .............................. AATATAAAAAGCTATCAGTTGCAACCTCTAGTGAAAT 12155 30 100.0 35 .............................. AGGATTTGATATGTTAAAAAGTATCCTAGTTCTTT 12220 30 96.7 36 ...........A.................. ATGCCATTGCTTCTGCACCACATTGCATAGGACGTC 12286 30 100.0 38 .............................. TCAAGATTATGCGTTACATTGTTTGAGTTCCAATTTTT 12354 30 96.7 34 .....................A........ TGCTGAAAAGTTGGGCTTTGTTTGGGCTGATATT 12418 30 100.0 34 .............................. ACAACGAAGAATACGCCATAAGCAACAAGAACAG 12482 30 100.0 34 .............................. CCTCGCTCATCTCTTGCTCGATAACTTGTATTGT 12546 30 100.0 37 .............................. TCGAGATTAGCAGCTTCACAAAAAGCCACTTTTAGGC 12613 30 100.0 35 .............................. GGATATTAGAGAAGGTGCGATATTTAGGGGCTTTA 12678 30 100.0 37 .............................. ATAAATCTCTAGCAGAGAAAAAGGCGTTAGATGCAAA 12745 30 96.7 34 C............................. CATACGTTCTCACACGGCACGCCGTCGCCATCTC 12809 30 90.0 0 ..................A........G.T | ========== ====== ====== ====== ============================== ======================================= ================== 63 30 99.6 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : GAGCTAGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCACTAAGCCTACATCTCGATCTTGCGGAGATTTTTAAGCCGATCTTGGGCGACACGCTGATTTTTAACATGCTAAATAAAAAAGAGATCACTGCAAAGGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAATGACGCTATGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGCAAATAAGCTTAAAAAGTGCATCTGCGAGGATGCGCCTTATGAGGGCTTTAGGTGGGAGTGAAATCGCATTTTAATAAAGTGTTTTTTAAGATTTTAGAATGCTTGAAATTTAGGGCTTGGCGTATTTACACATGGCTAAATTTTAGTCAAATTTAAGGCGAAAAATATAGACTTCTTGCACTAGAACGCCTATAAAATAGGCTTTTTGGTGCT # Right flank : TAATTTTAAAAAGACAACTTTACACATTAGAGTAAAAATAGTTGCTACATTATTATTTTTACAAAAATTACTTACTATGGTCTTTGTTTAAAATAACCACAAAATAAAGAATTTATTTTTGATCCGTACAAAGAACAATTAGCAGGCATGCACCATAATGAAGATAGTGCAATGATATTTAGTGCCTTAGAACATGAGTATCAAAAAGGGCTAAAAGAAACTCCTAATGACACGGATACCCCAGAAATGGCTTCATCTAAATCAAATTTAGATACTCCAGACTGTCAAAATGCTTTTATAAGGAAGTTAGAAAAAGATACGTTTTTCATGGTTGACGACAACCGCATTCACTCTTTTAATAGTCGTTTTTTTGGGGCAGTTCCATACAAATTTTTAGTTGGTAAAGTTAGATGGCAGCTATTTTGACACAATTTAGAAAAACGCCTTGACCAAAGATTAAAATAAAGCAAATTATCGGATCAATGAAATTTTTTATCAAT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //