Array 1 1271072-1272295 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LS483341.1 Streptococcus gordonii strain NCTC7865 chromosome 1, complete sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1271072	    36	 100.0	    30	....................................	CAGAAAAGAAACCAACAATGAAAACTTCAA	
   1271138	    36	 100.0	    30	....................................	TGCATGTCTTGAGCGTATAGTCGTCTTTGT	
   1271204	    36	 100.0	    30	....................................	ACATCGTCACCAGCAAGCACAATAGCTTTT	
   1271270	    36	 100.0	    30	....................................	TAACAACGAGTGTATATTCTGCAAGCGAGC	
   1271336	    36	 100.0	    30	....................................	GAACAGCATCCCAGAATTTCTTAATCTTAT	
   1271402	    36	 100.0	    30	....................................	TCGTTTTGAAAATGACTTCTACAAGTTACC	
   1271468	    36	 100.0	    30	....................................	TTCTCTGGCGACTGGTTTAACAAGGCTAAA	
   1271534	    36	 100.0	    30	....................................	ATAGCCTCAAGTCCGAACTTGCCTTGATAG	
   1271600	    36	 100.0	    30	....................................	AACTTAAGTTTTAACTTACGGTCACGAACT	
   1271666	    36	 100.0	    30	....................................	AAACATATCAACTGCTTCATTGGACATTAC	
   1271732	    36	 100.0	    30	....................................	ATCCAACAGATCGGCATAGTGGATACTATC	
   1271798	    36	 100.0	    30	....................................	TTTTGCGTTTTTATTATTACGCTCAAAGCG	
   1271864	    36	 100.0	    30	....................................	TCTAGGAAAAAAGTGAACAGCGAAGGTCTT	
   1271930	    36	 100.0	    30	....................................	TATAACAAGTACTAACTTAATAATAATCTA	
   1271996	    36	 100.0	    30	....................................	TTTCCATATGCTCCAATTGTGACAGTGTAA	
   1272062	    36	 100.0	    30	....................................	CTTCCTCATCTTTACCAACAATAAGGATAT	
   1272128	    36	 100.0	    30	....................................	TGTATCAAGTCAATTGACGATGATAGCAAC	
   1272194	    36	 100.0	    30	....................................	TATAACCCAGAAAACTATTGAAATCAAGGT	
   1272260	    36	  97.2	     0	...................................T	|                             	
==========	======	======	======	====================================	==============================	==================
        19	    36	  99.9	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   ATCAGCTTAATGACAAGCCAGAAGTCAAATCCATGATTGAAAAACTGGTAGCTACGATTACAGAATTGTTAGCATTTGAGTGCTTAGAAAATGAACTAGACCTAGAGTACGATGAAATCACCATTCTAGAGTTAATCAATGCTCTAGGAGTCAAAGTTGAAACTCTGAGTGATACACCTTTCGAAAAGATGCTAGAAATTATCCAGGTTTTTAAATATCTTTCCAAAAAGAAACTCCTTGTTTTCATCAATGCGACCGCCTATCTATCAGAGGATGAGTTAATAAATCTGATAGAGTATATCCAACTCAATCAACTGAGAGTCTTATTTGTTGAACCTCGAAAAGTCTATGATTTCCCGCAATATGTGCTGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAAGAATTGGAACTTGACGAGCTGAAGTCTGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG
# Right flank :  TAATATTAAGATTTAATTCAATTCAACCATATTAGCTAGAGGTTGGTGGGGAGTTCAAATGAGAAAGCAGATAGAAAAGTTATTAAACAGCGATATAAGCACAAGCGCAATCGCTAAAGGAGCAGGTGTTCCTTGGTCTACAGTAGCGGACCTTAGAAAAGGGAAAACCAGTATCGATAAAATGGCCCTGCTTACAGCCGAGAAATTAAATGATTTTGCGGAAGAATTAGAAGCGGAAAAGGACGATGAGTTTTACAATTAATCTATCCAAAAACAACCACCTATTTAGGTGGTTTTTTCAGTATCTATCACTGCTTACTAGAAGAAGAACTTGAGCTGCTTGAGCTGTCGCTGCTGGATTCAGAACTGTCTTCTGAGGAGCTGGTGCTTTCAAATTGTTCTGGGTGGAGCGCTCGATAGCTTGGAGCATCAAAGAGGTCAATGGTCGATTCGCCCTTACGTTGGCTATAGAGACTGGTTGATTGGTCTCCTTTTTCTTC

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.27   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//