Array 1 172117-171295 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_KB021555.1 Escherichia coli O104:H4 str. Ec11-4984 supercont1.4, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    172116	    29	  96.6	    32	............................A	GGAACTGGCGCTGCTGGAGCAAAACCCGGTAT	
    172055	    29	 100.0	    32	.............................	AAAAGGGCCGCATTGACGGCCCTGTGTTATCG	
    171994	    29	 100.0	    32	.............................	TTAGCTGTTAGCCAAACATGTCGACCTGTTTG	
    171933	    29	 100.0	    32	.............................	GGGTGGCGGTGGTGCTGTAATTCACACCGGTA	
    171872	    29	 100.0	    32	.............................	TATTCCCCCAGTCACCCCCGCCACCAAAATCA	
    171811	    29	 100.0	    32	.............................	ATTTTTCAGACTCATCAAAATAATCCTTTAAT	
    171750	    29	 100.0	    32	.............................	CATTGCCTTTGCAGCGTCTTTCCGATCATTCA	
    171689	    29	 100.0	    32	.............................	AACGTGAGATACGCCTCCCAGCGGCGCTCGGT	
    171628	    29	 100.0	    32	.............................	CCGTCAAACAGTATCACCGCGTTAACGCCCGC	
    171567	    29	 100.0	    32	.............................	CCACACACGTCGAGCTGGTGGGGGTTAATGCT	
    171506	    29	 100.0	    32	.............................	ACACCTCTACTGACGTTCCTGAACAAGAAGAT	
    171445	    29	 100.0	    32	.............................	AAACCGGACGAGGGCGCGCTAAAACGTGATTA	
    171384	    29	 100.0	    32	.............................	CCTCTCAATTTGTAACGTCTGCAATGTCAGGC	
    171323	    29	  93.1	     0	..........T.................A	|                               	
==========	======	======	======	=============================	================================	==================
        14	    29	  99.3	    32	GAGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTACA
# Right flank :  CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATATTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATGTTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GAGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.65   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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