Array 1 20499-17379 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRGB010000022.1 Porphyromonas levii strain DD39 JD53_21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 20498 30 100.0 35 .............................. TCAATTGCCGACCAGCAGGCAAAAGCGGGCGTTTC 20433 30 100.0 35 .............................. ACCTTAGAGAGTGTGCCGAGGATGCGTTGCAGACC 20368 30 100.0 34 .............................. GTAGGATTGGCAGCTCTTTGCTCTGCCTGCATCA 20304 30 100.0 35 .............................. CGATTTATCCTCAATGCGTTTGTACGTTAGCAAGT 20239 30 100.0 38 .............................. TCGATTACCTCGTGCTCCTCCTCGTCAGCCGCACCATT 20171 30 100.0 36 .............................. GCAGTTGTGAGTTTTCGAGCCGTAGCTGCACCACCT 20105 30 100.0 36 .............................. TACCTACAGATGCACCATTATGTGTCTTTCTATAAG 20039 30 100.0 35 .............................. TTTGAGATAGACAATAAGGATATACTAGGTGCTGC 19974 30 100.0 36 .............................. TAGAGTAGGTATCCTTCTTACTTGCAACCTCATGGT 19908 30 100.0 36 .............................. GTCATTGTTTGTAATCTTATTTTGTTAGTAATTTTC 19842 30 100.0 36 .............................. AGTACCTCACACACTATCATAAGCGTAGATACATTA 19776 30 100.0 37 .............................. AAGCCTTCGGAGCTGCGCAAGCTGCGAGGGCTTTTAT 19709 30 100.0 36 .............................. CGAACTCCAGCATGCCACCACGGAAGTAGAGAGGTC 19643 30 100.0 36 .............................. ATATAATCAATAAGTGACGTTTTAAACTCTAATACA 19577 30 100.0 36 .............................. TTCTATATATAAGCATAAAATCCTCCATCATGCTTA 19511 30 100.0 36 .............................. ATACTTTCCAGCGTCTGCTTGTGGTGCACAATTTGT 19445 30 100.0 34 .............................. CTCTTTGAGCTTCCTATGTATTTTTATCCATCCG 19381 30 100.0 37 .............................. AGGGAAGCAAAAGGGGAGTATAAAATAACGGCGAAAG 19314 30 100.0 36 .............................. AACCCAAGTATCTAGTTCATTAATGACTCTTTTAGA 19248 30 100.0 36 .............................. AAGTCGGATAATAGCCTTTCCGCTGTACACCCGCCT 19182 30 100.0 35 .............................. CGCACTATCATCAGCACTACCGGCACGATACAACT 19117 30 100.0 36 .............................. GTGTGCTTGCACAAATACTGAGCTGGACTGCGTTGC 19051 30 100.0 35 .............................. GCGCTTTATTGCGGTCTCAAACTGCTCTATCATGC 18986 30 100.0 36 .............................. AAGTCCGCAGGTCGCCTGCGCACAAAGGTGATGACC 18920 30 100.0 36 .............................. GTGTATCTCTCATCTCATCTTTATGCCTTTAATATT 18854 30 100.0 37 .............................. AAGGTCGCAGGTCTGAGCGCAGAAGAGAACGAAAAGA 18787 30 100.0 34 .............................. TAGACCTCCACGAAAAGAATACTGGGACTACATG 18723 30 100.0 36 .............................. TACATCCTTGTATATTCATTCCCGCCATTTCTTTTT 18657 30 100.0 37 .............................. TCGGCTTACGCGCCACGTTCCGCTGGTAAATCTCCAA 18590 30 100.0 35 .............................. TGAGGAGAAGAGGTGCGTAGAGGTCACCGTTCTTC 18525 30 100.0 36 .............................. AAATTAAAGTTTTTAGGAGTATCTACTGGTGGTAAT 18459 30 100.0 34 .............................. CTTTACCCTTTTTACCTCATCTTCGACTGTGGGT 18395 30 100.0 36 .............................. CGGATAAACAATGTTGAACGGCTACAAATATACAGA 18329 30 100.0 35 .............................. GGGGCTAGCATCAGGTGGCACTGGTGACGAGCTAT 18264 30 100.0 36 .............................. CACAACGCTCACCGGCTGGCTCAACGAACCACGCAC 18198 30 100.0 36 .............................. AGCTTTGAAGAATAAAATCTGGAGACGATAATACAA 18132 30 100.0 35 .............................. AAAAAAGGTGCGTATCTGCTGTATCTCAATGGTGC 18067 30 100.0 38 .............................. TACTTCGTGGTCAATGTTATGACATCGCCCCTTTCGTG 17999 30 100.0 35 .............................. AATTCGGGCAAGGTGACGGCAACCCTATCAGGTTC 17934 30 100.0 35 .............................. ACTGGTTTTACGCTGGAGCACCTAGTGCAAATAAG 17869 30 100.0 36 .............................. CATCTTGATGCGCTCGCCCTCTATATCCTTTTGCTC 17803 30 100.0 37 .............................. TAATCTTTTCTAACGCATCATTGATGACATTAGCCAT 17736 30 100.0 36 .............................. CTGCGACACGACCGTCACACAGGTGCGGTTCGACAT 17670 30 100.0 37 .............................. CGTCTTGTGCTCCGCTCTGCTTTGCTTGCTCTATACT 17603 30 100.0 36 .............................. TCGCAAAACACTCTAGCACGTTATCGTTATTGATAG 17537 30 100.0 35 .............................. CAGACATAGTGCCAAAAGCACTATAGACAATACCT 17472 30 100.0 34 .............................. TTATTGAACTTGTGCTTTTTGGGAAGTCTAACGT 17408 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 48 30 100.0 36 CTGTTAATCGTACCATACTGGAATTGAAAC # Left flank : ATAATATTTTCATCAAGACAAGAGGGGTGGTTAGACAAAGAGATTATGGGAATTGAGAAAGCATCTACCGATAATTTCTTGTGAGTATTTTCCTATTTCGAATTACACGCCAATGCGTAAGGATGATAGAGATCATAGACATTTCGAAAACTAATAATATCTTTGTTTGGGTCGCATCAGACTAATAGATGTAAATCATGGTTAGCATTTTAGTGCTCTGTAGGACAGTTCCCATATCATACAATATGTGGTGCGCATAAATTGCTCTATAATGATGGGTTATTCTCTAAATGTCTGTCGATACTGGTGTTCACTAGTATTTTAGACGGTCTATGAAAATAGGAGGAATATTATGTTATTGATAATCAGTAGAATGGACTGTTGTCGTAGGTGCACTCTTATTATACGATTAGGGTTCGACGACATCTTCCAAGCAAAAAGTGCCAAATAAATTTTCTAACAGACTTGTAACCAATGATATATTATAGTAAATTTGACGG # Right flank : TATTCGTCATCATCACGCACCTTATGTTCGATAGTTCTGAGAGATGGGGGGATTTGAGAGAGGGGGAGTGGTCGAATTCTCTAGCGCGAGCGGGGAAATTTATCTCTAGGAATAAAAATATTTATTCCTAGAGATAAATGTTTTTATTTGTGCAGAAAAGTAAATTTATTCCTAGGGATAAATTTGATGGTGAAGTAGACTATTTTTTTGCTGCTGTATATCAAGCGCTTGGGTGAAGGGTATTGCGCTGTAAATTGGTATATTTGTACGCTAATGTATAGGTGTGTATGAAGCTAAGGACTGAGGATTTAGTAAAGAAATATAAGAGTCGTACGGTGGTGAACCATGTCTCTATCGAGGTGGAGCAAGGTGAGATCGTGGGGCTTCTGGGGCCTAATGGCGCTGGGAAGACGACTACTTTCTATATGACGGTGGGGTTGGTACAACCCAATAATGGTCGGATTTTCTTGGATAATCGAGAGATTACCAAGGAGCCAATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTAATCGTACCATACTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA //