Array 1 1230481-1234278 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM001398.1 Oenococcus kitaharae DSM 17330 chromosome, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1230481 36 100.0 30 .................................... TGCACCATGTGCCATATCATCGGCATTGCC 1230547 36 100.0 30 .................................... ATAATCACCCAGCTAGGATTTGTACATGGC 1230613 36 100.0 30 .................................... AAGAATTCTGTCAAATGCTAAAGACAGATA 1230679 36 100.0 30 .................................... CACCACTTTTTACAAGCTCTGTTCTAATGG 1230745 36 100.0 30 .................................... GCTATATCGGCCAAACACAAGACCAACAAG 1230811 36 100.0 30 .................................... TTGCTTCTGTCGGGAATGCCGTGACTCAAG 1230877 36 100.0 30 .................................... AAAGTTTGGTCATTTTTTTACCTCAATCAT 1230943 36 100.0 30 .................................... TTCAAACAAAGCAATTGGTCGAAACATTGG 1231009 36 100.0 30 .................................... TGATACGATTGACTTTCAATATCACCAAAC 1231075 36 100.0 30 .................................... TAATTGATACAAACGGCGAAGTGTTAAGCA 1231141 36 100.0 30 .................................... ACTGTGATTTGCCTGTACGTGTGAAAAACG 1231207 36 100.0 30 .................................... TGGAACGGTGCTGAGAACCAATGGTTATGC 1231273 36 100.0 30 .................................... GTGATATTTGGATTAGGTGAAACAGAAACG 1231339 36 100.0 30 .................................... ACAACCTCAACTATTTGAGTGTTGGCAAGC 1231405 36 100.0 30 .................................... GCAACGAATAGGCCGTACCGACCTATTCGT 1231471 36 100.0 30 .................................... AAACGGATATTATCAATTTGAGGTAATCGC 1231537 36 100.0 30 .................................... TTCAGTGGCTCATAACCCATTGGCATTTGT 1231603 36 100.0 30 .................................... ATGATTTGAAAACAATCTTGCAGATAAAAG 1231669 36 100.0 30 .................................... AACGCATTTGCTGGAATTCGGACACGCCAC 1231735 36 100.0 30 .................................... AGTACAATACGGATGAAATCAGCATGTCGA 1231801 36 100.0 30 .................................... ATTCATGGGCTTAGGCACACACATGCGAGT 1231867 36 100.0 30 .................................... ACAATCGTGTGCTTATCGCCACGCCATGGC 1231933 36 100.0 30 .................................... GGTTGGATGACCATAATTTGCTGGGCTTTG 1231999 36 100.0 30 .................................... AATCCTTGAGCTAAATTACCGTTAATCGTA 1232065 36 100.0 30 .................................... TTTATTACTCCTTTCAAGCTGACTGTTGGG 1232131 36 100.0 30 .................................... TAGCTGCACTGGCAGAAACACGGGCATTAA 1232197 36 100.0 30 .................................... AAAATATCGTCAATACACAATCAGAAGGTT 1232263 36 100.0 30 .................................... TTTCTGTCATCTCGATCCTTTCTAAATTAA 1232329 36 100.0 30 .................................... AGAATGCGTTGTTTATCAAGGCTCAAAGTG 1232395 36 100.0 30 .................................... AGTTATCAAATCAAAATCGAGAGTATTAAC 1232461 36 100.0 30 .................................... GAGACCACTGGCTCTATGATGGAAAAGTAG 1232527 36 100.0 30 .................................... CTACTTCTATTGAAGTAGTACTACCAAGCA 1232593 36 100.0 30 .................................... AAGTAAATGGTACAAAAGCTCTCACAACGC 1232659 36 100.0 30 .................................... TCTTGGCCGGTATCGGAAAGGGCATTGCTA 1232725 36 100.0 30 .................................... AATTGCTTAGAGAGCGATTTTTCAAACAAT 1232791 36 100.0 30 .................................... TACCACATTCTTCAACAGACTATCAGTCCT 1232857 36 100.0 30 .................................... AACTAATTTATTCCTTTTAAGGAACATATT 1232923 36 100.0 30 .................................... GCGTATATGCTCAAACCGGAGTTCATAGAA 1232989 36 100.0 30 .................................... ATAGCGACGTTGGCTAAACAACCAAATGGG 1233055 36 100.0 30 .................................... TTTATCAGGTTTCTCTAAATAGTTCTGCCA 1233121 36 100.0 30 .................................... TACAAAGCCGTTGGTAATTTATCCGGTTCA 1233187 36 100.0 30 .................................... TTCACTTCCTCTTTTCTGAGCCCAGAAAAT 1233253 36 100.0 30 .................................... AAGCGGTGGTTCATGAAGCTCGCCAAAATT 1233319 36 100.0 30 .................................... CTGATAAACGACGGAATTTTGTCCCTTGAC 1233385 36 100.0 30 .................................... ATTTCAAAGCAATTTCGCAAAAAGATCAAA 1233451 36 100.0 30 .................................... GAAAGCAAATCTTATCTCGTGACGCAGGTG 1233517 36 100.0 30 .................................... TAGAATCAATCCCCTGTGCTTCGTCTCTTG 1233583 36 100.0 30 .................................... GAAGGCTACATCAAGACTGGTGTCGATCAT 1233649 36 100.0 30 .................................... CCGTTGGCATGCAACCAGATGCCAACAACC 1233715 36 97.2 30 ............C....................... AACCGTTCAGTCCATAAACGCCGGCGCTAT 1233781 36 100.0 30 .................................... CGGCAAAGCGGAATAATCTTGTCACCTTCG 1233847 36 100.0 30 .................................... TACAGCTTACAAAATACATAAAAGTATGCA 1233913 36 100.0 30 .................................... TTATTTAAAAGCCGGTCAACATCCTTTTAA 1233979 36 100.0 30 .................................... CATTTTTATCTGTAATGTCACTAAAAATAT 1234045 36 100.0 30 .................................... TACAGCTTACAAAATACATAAAAGTATGCA 1234111 36 100.0 30 .................................... TTTCCCGTGCGTGGGAAAACCCTGATTTAA 1234177 36 100.0 30 .................................... CATGCTGGTCTTGTATGACACCAAACATGA 1234243 36 94.4 0 ..................................TT | ========== ====== ====== ====== ==================================== ============================== ================== 58 36 99.9 30 GCTTCAGATGTGTGTCAGATCAATGAGGTAGAACCC # Left flank : TTTGGGGATGTGACACGAGTTTTTGATTTTAATCAGCTTTATTTAAAAGCAGCAATCAAAACTTTATCAAAAAATTTTGACGAAATGGATTTGCAACAGCTTGACGATCTTAACGGTCAAATTAATCGGTTATTTACAAAGGTCATTTTTTCTAGCAATTTACCAATAGATTTAAACTTAGAATTTGATTTAATGGAGACAATCAAATCTAGGAAAATCGTGATAGATATGCCCATTCTCAACACGCCCTACGATAAAATTCGAAGTACAATAGATCTAGCAGCTGAGTTGTCAGATCCTCATTTGCTTGTTTTTACGAATGCTTTTCAATACTTGACTATGGGCCAAACCAATCAATTGGCTGAATATTCAAGATCAATGGAAAGAAATGTCTTATTTTTAGAAAGGTTTGATTCCAAAATTGATCTCACTGAAGCAGCTAATTCCTATTTCTTCGATAAAGACTTTGTCCAATTCTAGAAAGTACGAACATGCGGTCT # Right flank : TACTTTATCTCGCATAACTATTTGTGCTTGTGGCTCAGATAAATATCAAATCCAGTTAGCACCGCCAGATAGTTCTTTATATGATAGTTTGCAAATAAAATTGAGTGAAAATTCAAATTTCCTGTCGGAAAATCTCGTTTTAAACTAAAATTTAAATGGGTAAAGGGATTTAAAGGGGAGATTATGAAGAGCGTTTTTTTATTGTGCGTAATAATTGCGTCAATTAGTTTGGTCTTATTTGTCGTTTCAGGAATTTTATTAATCTTAAAGAAATTTAGAACGGTTTCAAAAATCGTTCTTTTTCTATCGCCAATTTTACTTATTTTCGCGGTGTTTGGTGGATGGGCTGCTAACAATCAATATCAAGCTAATCTGAGGCAAGCACGCATTGCCCGAGAAAAGCAGGATCGGAAAGCTGCCATTAAAGAATCAAGTAGCTATAAGGCGGATGTGCTTGCCAGTGGCTATCTTGCTGGTTCGGAAATTGAAAAATCCGGATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAGATGTGTGTCAGATCAATGAGGTAGAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //