Array 1 407415-408711 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_015678.1 Streptococcus parasanguinis ATCC 15912, complete sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	================================	=====================================	==================
    407415	    32	 100.0	    35	................................	TTAGCAAAATTGGGGTGTTTTATCCTCAATATAGC  	
    407482	    32	 100.0	    37	................................	CATTCACGTAGATATTCCTTCATTGCCTGAATGTCGT	
    407551	    32	 100.0	    36	................................	TGGTTCGCCTTTTGTATTTATGATCGTTCTCATCAT 	
    407619	    32	 100.0	    34	................................	TACACTCTTTTTGACGCTTTGCAAGTCAATAAGA   	
    407685	    32	 100.0	    34	................................	AAATTAATTATAAAGGTCAATCAAATTAGAATTT   	
    407751	    32	 100.0	    34	................................	TTCCAAGACCTGATCCAAGTTAGTCGCTAGAGCC   	
    407817	    32	 100.0	    33	................................	AGAAGAATATTTACAACCTTCTTGCTTCTCAAT    	
    407882	    32	 100.0	    34	................................	ACCAAAAGATCCTAAGAACACAGAAAATCCAAAA   	
    407948	    32	  96.9	    33	.......T........................	CAGATTTTTTTGTAGCTCCTTGCGCTGCTCTGG    	
    408013	    32	 100.0	    34	................................	TGATGATTATAAATATCTTGCAGAAGAAACTAAA   	
    408079	    32	 100.0	    34	................................	TTCCCCAGTTAATTCCAAAAACTACACTAATAAG   	
    408145	    32	 100.0	    34	................................	TTGACTAATAATAGTTGGCTTCACTTTCCCATCA   	
    408211	    32	 100.0	    34	................................	TAAAACAAAATAAAAAAAGCCGACCAGTGCCGAC   	
    408277	    32	 100.0	    35	................................	TTTGGATTATGGACAAGGATACCAGAAATTATCGG  	
    408344	    32	 100.0	    35	................................	ATGGCCCGAAATAACCAAGTGGCACAAAGCCTCGG  	
    408411	    32	 100.0	    34	................................	TCGTCCCATTGGTAGCGTTTATGCTCCTCAATAA   	
    408477	    32	 100.0	    37	................................	TCGACCCAACTTTTTAGCATTAAAGGTGAACAAGCAC	
    408546	    32	 100.0	    35	................................	TGGTTTTACCCAAGGATCGCAAATAACCCTATAAT  	
    408613	    32	 100.0	    35	................................	ATCCGCAGCGCTTTCTGGGCTGACTAAGGTAGCCG  	
    408680	    32	  78.1	     0	..............T..AA....TTG....T.	|                                    	
==========	======	======	======	================================	=====================================	==================
        20	    32	  98.8	    35	GTCGCTCCCTTCACGGGGGCGTGGATTGAAAT	                                     	       

# Left flank :   CAAAAGCTATTCGTGGGGAATTAGAGTCATATCCACCATTTATGATATAGGAGTTTATATATGATGGTACTGGTGACATATGATGTCAATACTGAAACAGCAAAAGGCAGGAAGCGTCTGCGCCATGTTGCAAAACTGTGCGTTGATTATGGCCAACGTGTTCAAAATTCAGTATTTGAATGTTCAGTAGCTCCCGCAGAATTTGTGGAAATAAAGTCTAAGTTACTAGATATTATTGACCCTGATTCCGACAGTATTCGATTTTATTTTCTTGGAAAAAATTGGCAAAATCGAGTGGAGACTATTGGACGAGATACAAGTTATGATCCTGATATAGGAGTATTAATACTTTAAAACGAGGAGTGCGAATCGAAGTTGCTCATAAAATAGCAGGAGTTTCGCGCAAAAAATTAGAAAAATTAATGGCAAAATTAGATTTTAGGGAATTATAATTCCTTTGTATTAATCAATTTTAGCCATAAACGGTGCAACTTTGCGCT
# Right flank :  TTTATTGGTAAAAAATTTTAATATTACAGATCAGCATTATAGATCTCCACTTTTTCTTTGACTCTCCTTTCTTATTTTTCTAAAATAGTAGGTATGTGAAGGGAGATTGATATGAAAAAAGGTTTGGTAATTGTGCTTTCTGCTTTGGTCTTGGCCTCGTGTGGTCGTCCTCAGAGGACGGTGACGCCTAAGAGTTCGGATACAAAGCAGACCAGCACTTCGGAAAAGAAACAGTCTGGTATGGATTTGAAAGCCATTAAGGCTAAGGACTACTCGAGTATCAAGGGAACTTGGATCGATGGTCGTGGTAATGAGCTGGTCTTTGATGACAAAGGCTTGGTCAGCGAGGATGTTGAGCTTGATGCATCGAGCTTTAAGCAGAAGGACCAGATTGCTGAGATGACGGTTAGTGCTAAGTCGGGTGTTGGAGGCTACGGTCTTTTGCTCCTTCCAAAAGGTCAGAAAGCGGGCAAAGACGATGTTTCGGATAAGTCCAAGGA

# Questionable array : NO	 Score: 9.20
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCTCCCTTCACGGGGGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [5,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-6.40,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.78,0.64   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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