Array 1 164690-162103 **** Predicted by CRISPRDetect 2.4 *** >NZ_SSBK01000009.1 Streptomyces sp. A0958 NODE_9_length_213048_cov_173.809136, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 164689 29 100.0 32 ............................. ACCATGGGATCACTGACGTTCGGCGGTGCGAA 164628 29 100.0 32 ............................. TGTCATGACTGTAGTCTGCGACGTTAATGGGG 164567 29 100.0 32 ............................. GGTAAGCCTCAGAGGTGGTCACGGGAGGGGTT 164506 29 100.0 32 ............................. GGCCGCAGCTCACTGTTCTTCGGCAGCCTCTC 164445 29 100.0 32 ............................. CCAATCCGCCGCCTTTCCAAACATTCCCGTTG 164384 29 100.0 32 ............................. GGGAGCATCAAGGCCGAGACCGCCGGCCGCAT 164323 29 100.0 32 ............................. CGGTAACCACATCCACATTCGAAGGAGACACA 164262 29 100.0 32 ............................. TCGCAGCACTACGTCGCCGGCAACTCGCTGGT 164201 29 100.0 32 ............................. GACATCTACGTCCGGTTCGTGGCCCGCTCCAC 164140 29 100.0 32 ............................. AGCGGCGCGATCGGCGTCGACGGTTCCACGAC 164079 29 100.0 32 ............................. TGGAGCATGGCGCCGGCGAGGCCCTTACCCTT 164018 29 100.0 32 ............................. GGTACGTGTGTGACTGTTGCTGCTTCGTCACA 163957 29 100.0 32 ............................. GAACGGAGCAGACCATGCCCAAGCCCCCGCTC 163896 29 100.0 32 ............................. TGCCGCCGCTCGCCGCGACACCGTACGTCCAG 163835 29 100.0 32 ............................. TGCCGGCCATCGATCCGGTCAGCATCCCGGCC 163774 29 100.0 32 ............................. TCCGAGAGCGTGTGCCCGATCCGGCCGGTGAC 163713 29 100.0 32 ............................. GCCCGGCTCGCCCAGGCCGCGGCGGACGGTTC 163652 29 100.0 32 ............................. GGTCGAGGGCAGTGACGCCGATCACTGTTGAT 163591 29 100.0 32 ............................. ACCGGTTCGGGCCTGCCAGTGCCGTTGTAGGC 163530 29 100.0 32 ............................. TACTCCTCTCGGTACCTGGAGGACTTCCCCTC 163469 29 100.0 32 ............................. ATGCCCCGGACAAAGACCCTTATGCCAGTGCA 163408 29 100.0 32 ............................. TGTCCATGAGGGCAACGGGCATCGCCTGGAAT 163347 29 100.0 32 ............................. CGCCGGAACGACGCCGTGACCGAGCTGGACAA 163286 29 100.0 32 ............................. CCCGCCGTGACCGAGCTGGATAAGCAGCTGGT 163225 29 96.6 32 ............................T TCGACGGGCACCCGGAGCAGAATTCGGAAATT 163164 29 100.0 32 ............................. TTGAATCGGCCGTACGTCACCGGGCCGGGCTT 163103 29 100.0 33 ............................. AGCCAGGCCGCCACCGACCTCGGCAAAACCGTC 163041 29 100.0 32 ............................. ATGAGCGGGAACGTCAGCCCGCCCGTGCTGAG 162980 29 100.0 32 ............................. CGTGTTCGCCGCCCTGGCGGTGGCCGCGGTGG 162919 29 100.0 32 ............................. CGTCCTGGAGGCGTGATCAATGGCAAGGCTCA 162858 29 100.0 32 ............................. CGACAGGCCCGAGTCCTGTACTGCCTCGGCAT 162797 29 100.0 32 ............................. GACACCGGTTGGGGCGGCGGCGCCTCCGGGTT 162736 29 100.0 32 ............................. AAGAAGATCCGCGCCCGGAAGAACGCGGTCGA 162675 29 100.0 32 ............................. GTCGCGAAGGCGGCTGCCGACGTCTTCCACAA 162614 29 100.0 32 ............................. GTGTTGGCCACAGTCAGTTCTCCTTGCGGGTT 162553 29 100.0 32 ............................. AACGACGCGGAAGAGGCAGTGAACCTCACCTG 162492 29 100.0 32 ............................. AACCCCAAGTCGGTCCTGCGCCGCTGCACGGC 162431 29 100.0 33 ............................. AACGGGGTCATCTGCTCCGCGTACTCCGCGACC 162369 29 89.7 32 TGC.......................... ACGCCGCGAGGCGACCGACCCACAGCCGACTT 162308 29 100.0 32 ............................. GGCACCCCGGCGGCGCCGAGCGCGGACGTTCC 162247 29 100.0 32 ............................. ATGACGACCTCGTCGCCATCCGCCAGCGCCAA 162186 29 100.0 26 ............................. GGTCCGGCACCGCCGCCGACGCCGGT 162131 29 96.6 0 .........................C... | ========== ====== ====== ====== ============================= ================================= ================== 43 29 99.6 32 CTGCTCCCCGCACGCGCGGGGATGGTCCC # Left flank : TCCCGATGTCGTGCACCCCGGCCAGCCAGACGGCGAGCCGTCGCGCATCGCGTTGTCCGTCGGGGAACGCCGAACCGATGAGCGCCCGGACGTTGGCGGGCAACCACGTGTCCCACAGCAGCCCGGCGATCGCGGCGCCGTCCTCCATGTGCCGCCACAACGGCAGCCAGCCGTCGGAGTCCCGGTCATGCTTGGCCCACACCGTACGGGCGGGGCCGGTGAGTCTGGCGCGGAGCCCGGAGCGGGCGGCGCCTTGCCTTGCGGTGGTCATGGGAGACGGATACAGGGGGCGGGCGGGGCAGGATGGTCATACGATGAAACTCGTGCGAATACCGGGTGAGTTGGGGAGGATGGCCGCGAGGATGGCAGGTCGCCTATACAATGCCCCTTCGACTTGCGCTACTTAGCCCATCAATGAGCACCTTGAGGTCGTTATGTCGGATTGCATGAAAGTGGTCAGAAACCCCGGCCCCGCCGACTAAAGTCGCAGGTCACGCAGT # Right flank : GGAGACCCACTGAGAACCCGTACAAGACAGTGTCAGTGCGCGGGTTGACTGTCAGCTGAGCACCACGCCGCAACACCACGCAAGAAGGCACTGAACTCATCAGCCGTGATCACCAGCATGGGTCCATAGACATTCTTACTGTCACGCAGTGCACGACCGCCGTCAGGCAGCACGGCCACTTCTACGCAATTTCCGTTGTTTCCCGAGTAGGAGGACTTCACCCACTCCACTCCGGCAGCCGAAGAGAACCCATCGCACGGCTTCATGATCTTCCCATTTCCCTTATGGCGTCCGTGATGAGCGCCCGAGACTTGCTGACGTTTGCAGCCGCCATGTTGAGCCGCCGGAACAACTTCGTGTATGTCTCCACGTCGGGCACCTCCTCGTAATACAGCGTGCTGGTAGGTGACTCCGTATAAACGATCTCAGTCTCCGCGGAAGCCGGGAAACCCATGATCACGAACGGGCCGAAAAGGCAGGCGTTCATGGGGTCTTCCCTC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 174670-175492 **** Predicted by CRISPRDetect 2.4 *** >NZ_SSBK01000009.1 Streptomyces sp. A0958 NODE_9_length_213048_cov_173.809136, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 174670 29 100.0 32 ............................. GATCCGGAACTGTCGGAATCGTCAGGGGAGAA 174731 29 100.0 32 ............................. CACGTCGGCATCGTGACCGCCGTACTGTCGGG 174792 29 100.0 32 ............................. GGCCGTCGTCGGCACCGCTGTTCAGCCGATGA 174853 29 100.0 32 ............................. GACGTGCAGACCGAGGCGGCCACCTACACCGA 174914 29 100.0 32 ............................. ACCGCATCGTCCGCAAGGCTGCCCGCGATCTG 174975 29 100.0 32 ............................. CTGGATGAGGACCAGAAGGCGACGCGCGAGCA 175036 29 100.0 33 ............................. CGTGAGGTCGAACGAGACGTTCGTAAGCGGGAG 175098 29 100.0 32 ............................. TCGCCACCGACGCCGAGGAGCGGCGCCGGACG 175159 29 100.0 32 ............................. GTCCAGGCCGGCGGGAGAGCCGGCTAGCTGGG 175220 29 100.0 32 ............................. TGGTTGCCGGGGTTGCCACTTGGACGTGGGGA 175281 29 100.0 32 ............................. TGCGTTGGGTACTCGGCGTACGTATCGAGCAG 175342 29 100.0 32 ............................. AGGTCATTCGCGTCGGCGATCTCTGTCAGCTC 175403 28 96.6 32 ................-............ CACGAGCAGGAGATCAGCCGAGTCCAGGTCGA 175463 29 82.8 0 ...........C.C.C.......C.C... | T [175490] ========== ====== ====== ====== ============================= ================================= ================== 14 29 98.5 32 CTGCTCCCCGCGCGCGCGGGGATGGTCCC # Left flank : TACGGCGGCCCGGATGTCTACGAGGACGAGGAGATGCTCTGGTGACGGTGATCGTGCTCACCAACTGCCCGGCCGGCCTACGTGGCTTCCTCACGCGCTGGCTCCTGGAGATCTCCGCGGGCGTCTTCATCGGCAACCCCTCGGCGAGGGTCCGCGACGTGCTCTGGGCGGAAGTCCAGGAGTACGCGGACCAGGGCCGCGCCCTCCTGGCCCACACCGCCAACACCGAGCAGGGCTTCACCTTCCGGACGCACGACCACAAGTGGCACCCGACCGACCACGAGGGCCTGACCCTGATCCGCCGCCCGGCCGAGGGCACAGCGACGAGGAAGCAGCCGCCGGAGGGCCCGAAACCGGGCTGGAGCAGAGCGGCCAAGAGGCGGCGGTTCGGGAGGGGGTGAGCGTTCGATGTGCGGGAAGTTGTTTTGGGTGTATTGCCGGTTTCGGTGAAAGTGGTGCGGAACGGCTTTCTGGCGTCGTAAAGTCGCAGGTCAGGAAGC # Right flank : CTCACCCCGCCCCCAACGACTCCCCGAACCTCGCAGCCAACGGCATCCGCAACCCCAACGGCGGCGGGGCCGCCAGCGCATCGGCCACCGGGCGGGCGAAGGTGTGGCCGAAGAGGGCGCCCCGTACGAAATCGGAAGCCAGCGCAGCGACCTCCGCGCGGTGTTGGCGCAACGCGTGGCCGTCGGAGTGGACCTCGAAGCGGCAGGTGTCGCGGTTGGACTTCTTGGCGCGTTCGGCGAGGTGGAAGGACAACTCCGGGTCGCAGCGCGCGTCGTTGGTGCCGTGGATGAGGAGGACGGGGCGGCCGACCAGGTGCTTGACCGGTTCGGGTTCGGCCGAGGGGTCGGCCGGGAGCCAGGGGGCCAGGGCCAGGACCGCGCCGACCGCTGGGTGGCCGCCGGCGCGAAGGGCCGCGCGGGCGCCCATGCCGTAGCCGGCGAGGCAGACGGGGACGTCGCCGTAGCGGCGTACCGCCTCGTCCACCGCCCACTCGGCGTCC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 234649-234315 **** Predicted by CRISPRDetect 2.4 *** >NZ_SSBK01000002.1 Streptomyces sp. A0958 NODE_2_length_387000_cov_170.188377, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 234648 29 100.0 32 ............................. CGGTCAGAGTGGTGGGGCCCGTTCCACGACGC 234587 29 100.0 32 ............................. CGCGAAGGCGTCTACGTCCAGCTGACCCGCGG 234526 29 100.0 32 ............................. GATGCAGAGGAAGGCGAGCAGGACGAGAGCGA 234465 29 100.0 32 ............................. CGCGAAGGCGTCTACGTCCAGCTGACCCGCGG 234404 29 100.0 32 ............................. CTCGGCCACTGCATCGGGCACCCCTATGAGGC 234343 29 93.1 0 A.............A.............. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 98.9 32 CTGCTCCCCGCACGCGCGGGGATGGTCCC # Left flank : ACTGCACGTACATCGCCGCAGAGAAACAGAACGGCGCCCAGCCCCACTGGTTCTACAGCCGCAACGACCGCTCCTGGGCCTGCATCCTGGTCCAGGACGGCGAGGACACCGCCCGCGTCTGGCAGCACGGCCCTCGCCGGCTCTGGAACGAAGTACGAGCCGCACACAACTGGTGGACGACCCAAGGCTGCCCGGACTGGCCCCGCTTCGGCCTCACGGTCACCGACACGTGCCAACGCCTGTGGCTGGACGAGCCGGGGAACTACCTTTAACCGTCCGGTGATACCGCGTTCGGCGGTACGGGGCGCAACACGCACCCGAGGCGGTCCGCTGACACGACGGCGGGCCGCCCCGCACCGGCGGAACGGGTACGGCCGCTGGGGTTGTTGGCTTAAGCTGCCGCGCATGCCCGTCGTGGGAGCCTTGAGGCAGCTATGCCGGACTACGCGAAAGCGGCCAGAAACCCGACCCCCGTGAGGCAAAGCCCCAGCTCGCACAGC # Right flank : CCTACCAGCGAGGGCGCCCGGTGAGCACGACCCTGTTTCCCGCACGCAGGCGGGCACGCCCGGCTACGGTGGCCCCGCATGACCCACAGCCGCACCCACACCGGCATCGAGATCACGGCCGACCTGATCCGGGACCTCCTGCGCGACCAGCACCCGGACCTGGCCGACCGGCCCCTGAGGCTCGGCGCCCGGGGCTGGGACAACCAGCTGTGGCGGCTCGGTGACGGCCTCGCCGTACGGTTGCCGTGGGCGACGGAGTCCGCGGACGATCTGCTGCTCAAGGAACACACCTGGCTGCCCGCCCTCGCCCCGCGCCTTCCGCTGCCGGTCCCCGTCCCGCAGCGCCTGGGCGTACCCACCGCACGCTTCCCACGGCCCTGGCTCGTCACCACCTGGGTGCCGGGCGAGCCCGCCGACCGCGCCCCGGCCATGCGCGGTGAGGAGGCGGCCGACACCTTGGCCGCGTTCCTGACGGCCCTGCACCGCCCCGCCCCCGCCGG # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [25.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //