Array 1 58206-54398 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGQAN010000016.1 Shewanella algae strain LC2016-6 NODE_16_length_100242_cov_152.903500, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 58205 28 100.0 32 ............................ TTTTCCCCCTTTCCCCTCTTCCTCCCTCTCCC 58145 28 100.0 32 ............................ TTGCTGGTTATGATGTGCAAGTTTACGGTGAT 58085 28 100.0 32 ............................ AGCATATCAGCCTCCGAATATTATGGCGCGAC 58025 28 100.0 32 ............................ AACGAAAGTGGCAACAGTCGAAAGGTCCACAG 57965 28 100.0 32 ............................ CATTAGCGATATTAGCGATTCAACGCAAACTG 57905 28 100.0 32 ............................ GAAACGAAAGGGGTGTTTACCGACCTGACAGC 57845 28 100.0 32 ............................ GCTACCAGCTTCATCGACGTCTTAGGTGTTTC 57785 28 100.0 32 ............................ GCCCAGCTCGGCGCCTTACAGTGTGGGCAGGC 57725 28 100.0 32 ............................ ATAACCATCAGGTTCCCACCCTGAGTCACCGA 57665 28 100.0 32 ............................ GAAACCGTCTGAAACCGTAACGGCCAGACCCA 57605 28 100.0 32 ............................ AATGACTGAATTGATTCTTGGTTGTGCGATTG 57545 28 100.0 32 ............................ TCCTTAGATTGATTTAACAACGTTGCGAGCGA 57485 28 100.0 32 ............................ TGCATTCAATACAGCAGCAGTCTCTCCCAGTT 57425 28 100.0 32 ............................ TTACGGCGTCTGAGCAAAACGATGATGAATTG 57365 28 100.0 32 ............................ GGTACTCAGGTTGATAATGTCAAAGATTTTAA 57305 28 100.0 32 ............................ AAACTCGCTCCCTACGGCCATTTTCTCCACCC 57245 28 100.0 32 ............................ ATGAACGGACGGAAACAAGATTTTGCAGTTCA 57185 28 100.0 32 ............................ TCAATCATTTGTTTTTGTATCTCTTCCATTCT 57125 28 100.0 32 ............................ ATTAACTTACGACGTTCTTCGTCTTTTTTGTA 57065 28 100.0 32 ............................ TCCTCAGAGCGCACAGCTTCAAGTTGGCCAGC 57005 28 100.0 32 ............................ TGCCGCAATGGTATCCGGACTTTGAGGGCACA 56945 28 100.0 32 ............................ AGTAAGGCCGTGATCCTTCACCAGCTCGGCCA 56885 28 100.0 32 ............................ TAAGTGAAGGAGTTCAAACAATGAAAATGCCA 56825 28 100.0 32 ............................ AGGCGGAAAAGTCGTCAGCAGTAAGATGGCTG 56765 28 100.0 32 ............................ TGTATCGGGTGACGCTATCGAATGCGCCATCC 56705 28 100.0 32 ............................ GGTTATGTTGACGACTGGATCCCAAGCTACGA 56645 28 100.0 32 ............................ ATGGCAGACAGCACAGTGATCACGGACTGATC 56585 28 100.0 32 ............................ TATAGTCCCCATTGATGCGCCATATAACGTTT 56525 28 100.0 32 ............................ TGACGATGGACCGGAGGCAGCATGAGCCACAA 56465 28 100.0 32 ............................ TGATATAGGCCCGGCTCCGGGCGTTTCTCGGG 56405 28 100.0 32 ............................ AGCGAGCCGAAACAATACTAAGGGCGGTTCTC 56345 28 100.0 32 ............................ CCAGTTGACCGGCGTCTTTCATGGCGTTGATT 56285 28 100.0 32 ............................ AATCTAGTACAGGCTTCCAGTCTGCATCACTG 56225 28 100.0 32 ............................ TGTTGGGTGCGAGTGCCTGTTAAAGTCAGGAA 56165 28 100.0 32 ............................ CACTGGAACGGGTAAGGCGTGATATTGCCTAG 56105 28 100.0 32 ............................ TGTGAGCTTCTCGTTAGGGTCAATCAGATACT 56045 28 100.0 32 ............................ GATTGGGTCGGTAAAAAATGATAGGGGTTATT 55985 28 100.0 32 ............................ TGTTAACCAGGTCGCGGCGGCAGCGAAGGCGC 55925 28 100.0 32 ............................ ATTGGGGCCAGGATGGTCACGCTTTTTCTATG 55865 28 100.0 32 ............................ TGCACAGTATCGATACGGCGAAAAGGAAGAAA 55805 28 100.0 32 ............................ TCTGTAGAGTTTAAAGTCTACCCTGGCGGCCC 55745 28 100.0 32 ............................ TATAAGCGCGGCTGAGCCGAAACTGAACGTTG 55685 28 100.0 32 ............................ ATACGGTTTCTTCGGGTTCACCACTTTGGCCC 55625 28 100.0 32 ............................ TAAAGTATCCAATCCGACCAAGCAGGAAGCCA 55565 28 100.0 32 ............................ TGTTGGAGATTTGGGGCTAACTGGACGCATCC 55505 28 100.0 32 ............................ GTAACGGAAGCGCCAAAAACTGAACCCGTAAC 55445 28 100.0 32 ............................ CATCGGCGAACATCCAGCATTGCTTGTTGGGC 55385 28 100.0 32 ............................ GCCGTCACATTGCAAAATTGGGGGCGGGGAAA 55325 28 100.0 32 ............................ ACTGGCGCGGGCTGAACTTTCAGCACCATGTG 55265 28 100.0 32 ............................ CAACCCCTTGTAATCCGGGTTTGGCTCAATAC 55205 28 100.0 32 ............................ TTTTTCCCAGCGTTGCCAGGTGCGAGGCTCAC 55145 28 100.0 32 ............................ TCAATAACTTTTCGACGATTGTCACTTTTAAT 55085 28 100.0 32 ............................ TACGGCCATTTTCTCCACTCGGGTCGGGTCAT 55025 28 100.0 32 ............................ TGTCCAGGGCTCCAAAGTCTGGCCCATCGTTT 54965 28 100.0 32 ............................ GCCAGAGTCTCTGATGAGTCGATGCGAAATCC 54905 28 100.0 32 ............................ AATTCTGAAGGGAACGTGCAGCACAGAGCTAA 54845 28 100.0 32 ............................ TGGCGATACCAGTGGCACAGGTCGAACCGACA 54785 28 100.0 32 ............................ AGCAGCCTGCTTCAAAATGTCAGCAGTTGTTT 54725 28 100.0 32 ............................ TGTTGGCGGTATGCCCACCGATGCGACACCTG 54665 28 100.0 32 ............................ GTTACTTATGAGCCGTCTCGGGGTCGGACCGA 54605 28 100.0 32 ............................ GACCAGGACGACGCGATCATCAAGCGTTACGA 54545 28 100.0 32 ............................ TGTATTTGCGGCGCTGGTCGCCGGACGAGATC 54485 28 100.0 32 ............................ GGGCAAGCGCATTGTCTTGACCATTCCGACCA 54425 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 64 28 100.0 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTCAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCTGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACTGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATTGAAAGATATCCGCAAAGCACACCTGTGGATGGGCAGTTCGATTGCTACGGGCTAAGTCGTAAAGTTAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGCATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTGGTATTCAACAGGGTAAAAATAGCTTTTTTATCCTAACCACCTGTTGTGACTTTCTTTTATTGATTTATTCTATT # Right flank : GTTCTTCTGGTGATGACCTTTCCCCCGAATTTATCACTCGGCCCCAGCAAAATCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAAGTGATCTGAATAGTGGCCCGGCTCAAGGCAGCATATCCACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCATCGCTGACCGATAACTGGAAGCGTCCTGCTCTGGGTGGGCGCCATTCCAGGGTTTGTCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCTATGTGTTCATTGGCCACACTTTGGCGCAGGCTGTAGGTGACGCCCTTCAAGGGGGAGCGGATAAGCGGGGCAGTGTAGCTAACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGATGGCCAGAAGGCAAACACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //