Array 1 63411-64538 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIGYY010000113.1 Pseudomonas aeruginosa strain 8066_S7 8066-S7-MH-C114, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 63411 29 100.0 32 ............................. GTCGTGACCGTGCCGATCTATGTGGTTGTCGT 63472 29 100.0 32 ............................. CCCTCGAGGAGGCCGCGCAGCGGCTCGCCAAG 63533 29 100.0 32 ............................. CAGGCTGCTTTTACCGGCGCCGTTGTGTCCGG 63594 29 100.0 32 ............................. TGGGAGGAGCGGGAAGGAAGTGACGACCAGGT 63655 29 100.0 32 ............................. CGTGCAGTCGGTAAGAATCATCGCGCTGCCGC 63716 29 100.0 33 ............................. CTTCTATCCGAAACCCAGGTCACGCCAGACAAC 63778 29 100.0 32 ............................. GCCCCAAAAAGCGTTGGCGTCATCGGCTGGCT 63839 29 100.0 32 ............................. TCGTAGCCCTCCGGGAGGGATTCGAACTTGTA 63900 29 100.0 32 ............................. CCTCCGACGTGGAGGTTGAGGCGGATGGCTAC 63961 29 100.0 32 ............................. TGGAACTTCAGGTCCTTGTTGGTCAGGCGCTT 64022 29 100.0 32 ............................. CTCCCGTGAGCACTCAGGGCATCCAGTCGGCT 64083 29 100.0 32 ............................. AAAGCCATCGGGGCACGCATCGTTGCGCCAGC 64144 29 100.0 32 ............................. GCGATCTGAGCACCTGCGGATGCGTAGATGTA 64205 29 100.0 32 ............................. TAGGTGTGCTGGGCGTAGTCGGTGGAGTTCTG 64266 29 100.0 32 ............................. GCCGTGTCGTTCGATGGTGATGTCGTGCTGCT 64327 29 100.0 32 ............................. AGGTATTCCTTGCCCTTGGCCAGGAGCACGCC 64388 29 100.0 32 ............................. TCATCGATCGTGGCGGCTGCACTGGCTGCCTG 64449 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCG 64510 28 79.3 0 A..........A..C..-.....A....T | C [64514] ========== ====== ====== ====== ============================= ================================= ================== 19 29 98.4 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTTGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACTGGCCGCGCCGAGGCTGAGCAACAGTTTCCCGACCGCTCCTCCGTTGGCCAGGAAGGCCGGTGGATGGTCGAGGGTGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTGCGGAGTCTTGCTCGGTTCCGGTTGAGGTGGTGGGTCGTATGGAATATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGAATGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTGGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : TGTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCATGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTGATCACCAGTGTCAGCCGCCAGTTGCCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTGGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGCTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCTGTGGCGGAAGGAAATAGATTGTGAACAGGCGGCAAGTGAAGGTTGTTAGTGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGGAGTTCCTGCTAATTTGGACAGGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGGAGCAGGCGCATCCCTCGCTGGCTGCTCCTTGACGAGCGTCA # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 73711-75754 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIGYY010000113.1 Pseudomonas aeruginosa strain 8066_S7 8066-S7-MH-C114, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 73711 29 100.0 32 ............................. TGCGGGTTGTTGCTCATCGGGAATGGGTCCTA 73772 29 100.0 32 ............................. TTTCGTCGTGCGACTCATACACTGGCGCCTCC 73833 29 100.0 33 ............................. GTAGGTGGTCAGCGCCTGCGTGGTCGTCTGGTT 73895 29 100.0 32 ............................. ACTTGCCTTGATGACCTCGCGCTTTTCCTGCT 73956 29 100.0 32 ............................. TCGTAGTCTACGATGAAGCGCGGGTCGGTTTC 74017 29 100.0 32 ............................. TTGAACAGCAAGGACGCTGTACTCAAGCCCGC 74078 29 100.0 32 ............................. TTGATGGTGCGGTAGGCTGCTTTGCCCTCCTC 74139 29 100.0 32 ............................. CACGTTTCGGTCGGCTATCGCGTCCTGCGCGC 74200 29 100.0 32 ............................. TGTTGGAACCCGCTAGCGCGGGCGAGCAGGCG 74261 29 100.0 32 ............................. TCTATGGGAGGTGGGGAGTGAACGAGACCGTA 74322 29 100.0 32 ............................. GCGTTTCCACGCAGGCAGATGCTCGCCACCAC 74383 29 100.0 32 ............................. TAACGGCCCGCCCCTTCACGCGACCTCCCGCG 74444 29 100.0 32 ............................. CCAAGAAAGAACGCCGAAAGGCCGTTAGGAAA 74505 29 100.0 32 ............................. ACGTTGAGTACGTCGGCGCCGTACTTTTCGTC 74566 29 100.0 32 ............................. CGGGCCTTGGCAGCGAGCAGGGCCTTCATGCC 74627 29 96.6 32 .................T........... CGCACTGATGCCAGAGCCGGAGTCGCGACCGG 74688 29 100.0 32 ............................. GCGCTTCACGGAGACGGCCTGCTGTTCCCTGC 74749 29 100.0 32 ............................. TTCAGCAGGGCGTCAGGGATGGCATCGTGTCC 74810 29 100.0 32 ............................. GCTACTGTCGAAGCCGGCACCACTCTGGACGC 74871 29 100.0 32 ............................. GCCGGATTCCGCTGCCGGGCTACATCATCCCG 74932 29 100.0 33 ............................. CGGGGCATGACTTCAACCCACCCCCAGCCCTCC 74994 29 100.0 32 ............................. TCGCACTTCCAGCCATGGCTGGACAAAGCGGC 75055 29 100.0 32 ............................. GCAGTCAAGGCTGCCGGCGGCCAGTCCGCCCT 75116 29 100.0 32 ............................. GTGTAGCGGAACCGGGCGGCGCCGCCGGCGAG 75177 29 100.0 32 ............................. GCCAGCAGGGATGCCAGCACGCAGCCAGTCGC 75238 29 100.0 32 ............................. CAGTGACGGCAGCAGACGCGGCGATGCTGGAT 75299 29 100.0 32 ............................. TCGGTAGACGCACAGATGGTCGAGCAACTTCG 75360 29 100.0 32 ............................. GCGCAGGGCAAAGCCAAGGTCACCGCCGGCAC 75421 29 96.6 32 ...........A................. TTCGAGGTCAGCGGCTTCGGCCCCGGCGAGCA 75482 29 96.6 32 ...........A................. CCGGGAATGAACGTTCCCATGTCGGCTACGCC 75543 29 96.6 32 ...........A................. GTCGCCAGGCCCACGTCGGCGGATCACCAACA 75604 29 96.6 32 ...........A................. ATGTAGCTGTTACGCGGTCCCGCGGTGCTGAG 75665 29 96.6 32 ...........A................. GTGATGGAGCGGACCGCCCCGAGCACCGCAGA 75726 29 93.1 0 ........T..A................. | ========== ====== ====== ====== ============================= ================================= ================== 34 29 99.2 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : TGACCCGCATCATTCCCACCATCGAAGAGGTACTGGCCGCCGGCGGCGTCGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGCCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGGCACAGGACGCAAGGGTGAGCTTCCTGGCCGTAGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTTCTTCTTTAAAAACAATTCTGTACGGTAAGT # Right flank : GTGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGCCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGCCGGGTCAACCGGAACGTCGAGCGGCTACCAGGCGCTGCTGCAGGCGCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGATGGCGGGCTGGGCGGGAACCGGCCAGAGCAGGGAGAGACCGGGTTGCCGGTCGGCGGGGGGAATCTCGACCATCAGGTCCTTGTAGCGTTCGATGATTGCGTCGACGTGGGTCTTTTCCTTTTCATCCTTCGTCATGCTGGGTACTCCGTTTCTGAGAGTCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //