Array 1 110133-110287 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWXC01000043.1 Prevotella sp. BV3P1 contig00009, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 110133 28 96.4 32 ..................A......... TAGGAATAACTTGTAGTTGGGAGGAGTTAGCA 110193 28 100.0 39 ............................ CGGACATTAGCTTTGCAATCAAGTAGTTTGTAGTTATTG 110260 28 96.4 0 ...........A................ | ========== ====== ====== ====== ============================ ======================================= ================== 3 28 97.6 36 GGAGTAACTTGGAGTTAGGGGGAGTTAA # Left flank : TTGAGCAATAAGTCTGATGCCTATGCCTTGGTGCGTGCCAAACGACTGAACGTTCCTTCCGTTGTCGTGTCCAAGGCCGAGTTTGGCAAGACCGATGAGGTGCTGAAGCTACTTGATGAGCATCACATTGATTTCATTGTGTTGGCTGGGTTCTTGCTGATGATTCCCGACTATCTCATCCAGACTTACCACCGACGCATGATTAACCTGCATCCAGCTTTGCTGCCTAAGTTTGGCGGCAAGGGCATGTACGGACACCATGTGCACGAAGCGGTGAAGGCCGCTGGCGAAACCGAGACAGGCTTCACCGTTCATTGGGTCAGTTCGGTATGCGATGGTGGAGAGATCATCGCTCAGTTCCGCACCCCACTTCTCCCATCCGACAGTGTCGACGAAATTGCGGAGAAAGAGCACCAACTGGAGATGAAGCATTTCCCGCAAGTGATTGAGCAGGTTGTTCGGGATTTCTTGGGAGATAGTAAAAATAGTAGGAGTTAGCA # Right flank : ACGGACAATAGCTTTGCAAATGAATCACTTCTTTGGCGACGCTATTGTCCGTTAACTTCTATTTACTCCCCATTAACTCCCGTTACCTCCCATTAACTTGATTGGCAACGCTAATGTCCGTTAATTTTTATTTACTCCCCATTTACAGCCGTTGGCGGGAACCTTCTGCGTGTAGGCCCATGCTTGGCAGATACGGCTCCAGTGACAAACGTGCTGCCGGTTTTCAACAACTGTACCGTGGCATGCGTCATCGGCTCGTTCGTTTCTTTGTCTACCAGTGTTCCTGTAATCTGTCGTTCTTGTGTCCATGCGGCCATTGACATCATCATCAAGGCCAGCATGGTGAGGAGTTTTCGCTTCATCTGTTTAGTTTCGTTTACCTTTCTCATCGGCCTTGTTGTGGTTTCCTGAGCCGAGATACCTTATTATATGTGATGTTCAAAAAGCAATAAAGTTTAATTTTGGGCGGAAAATTTACCATCGTCTATGATTTTGTTACA # Questionable array : NO Score: 2.55 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAGTAACTTGGAGTTAGGGGGAGTTAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 10010-11880 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWXC01000007.1 Prevotella sp. BV3P1 contig00002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 10010 36 100.0 30 .................................... ACAATAAGCTAAAACGGTAGCATATTCATC 10076 36 100.0 29 .................................... GCCTCCAGCGAGGTAGGAGCTATCGCTAT 10141 36 100.0 30 .................................... AAAAACAACATTGTCAATGTCTTCCTCAAA 10207 36 100.0 30 .................................... AAAAGAAAGCAAAACAGATGCAAGAGGAGT 10273 36 100.0 30 .................................... TTGTCGAGAGTTGTTTGATAGTTACATCAA 10339 36 100.0 30 .................................... AAAGAACCTCCAGTGGTGAAGCCCTTGTCA 10405 36 100.0 29 .................................... CCTACTGGGCAGTCATTGTATCGGAGCCA 10470 36 100.0 30 .................................... AAAGCTCTTTCGGGTTCAGACAGTCTACCC 10536 36 100.0 30 .................................... CTGGTGCGGATGCTGTTATGTTCAAATCAA 10602 36 100.0 30 .................................... GCACGAAGACAGAATTGTTTACGACCTGTG 10668 36 100.0 30 .................................... GGAAGATGTTGAAGCTATTGTAGATGCAAG 10734 36 100.0 30 .................................... GAAGCCTGCCTGCACCTCAAAGAGGGAATA 10800 36 100.0 30 .................................... AAAACAATTACTTATAATCGCACAAAGACA 10866 36 100.0 30 .................................... AGAGTTACGGCAAGATGATTGTTCCCGGAG 10932 36 100.0 29 .................................... CGCCGACAAACGCATTGAGTTAAACAACA 10997 36 100.0 30 .................................... AAGATGGGTATATTAAAGCAAATATCTGCA 11063 36 100.0 30 .................................... AGGCGTACCAATTCGCATCGTTGTCCATAT 11129 36 97.2 30 ...................................T GTTATGCCGATGCGTGTTTTATCGTTACCG 11195 36 100.0 30 .................................... TTACTTGTTCCACTCATCTTCTGAATAGGT 11261 36 97.2 27 .....T.............................. TAGCCTCCCCTGCCCCCCGAACGAGGG 11324 36 100.0 29 .................................... AGTGCGCTAATATGCGTGCATAACCCGTG 11389 36 100.0 29 .................................... GCACTGGTTCTCTCACTTGTCATTGTTTC 11454 36 100.0 29 .................................... ATGTTGAACCTAAGAAGGAGGAAACGGCA 11519 36 100.0 29 .................................... AAGCTGACGGCCTGATTCATCTGTAATAG 11584 36 100.0 29 .................................... AGGGTAGTCTTTAAAGCAGCCTTAGTATT 11649 36 100.0 29 .................................... ACATAGGACGCAATATAGTAGGCTGTGTT 11714 36 97.2 29 .................................G.. CCAAGATGGACGAAGTAGAGCGACGCGTA 11779 36 97.2 30 ..........................G......... ATGTAAAGTACCAGCGGAGTTCACCGTCGT 11845 36 91.7 0 ..........A.................G...A... | ========== ====== ====== ====== ==================================== ============================== ================== 29 36 99.3 30 GTTGTGGTTTGATGTAGAATCAAGATATAAAGCAAC # Left flank : CCATGACAATGGCTTCTCTTGTGAAATATTATGCCAAAGAAGTAAAGAAAATCAGTTTGCCTCTTTTGAAATGAGTGAGAACCGGCTAAATGCTTATCATGTTATGTGGTTGTTTGTAATGTTCGATTTACCCACTGTTACAAAGAAAGATAAGACGGAGGCTGCACGTTTTCGCAAAGAATTAGAGAAAGATGGATTTACGATGTATCAATATAGCATCTATATTAGATATTGCGGTTCGCAGGAAAGCGCAAACGTTCATATCAAAAGGGTTAAATCAATCTTAACACCAAGTGGTAAAGTTAGTATTTTAACAGTAACAGACAAACAGTATTCAAAGATTATCAATATGTGGGGTGAAATTAAACAAAAAGCTCCAGAAACACCTATTCAGTTAGAATTTTTTTAGTACATTTGCAGTAAAGATGATATATTCGAACTACTTCTTGTATGAAAATATTTGTATAATGTGCTTATATTCAATATTTTAAATAGTACAT # Right flank : CTCGTTTCAATTTCTCTTTTAACTTGTTTGGTTCTGGTATCTTGTCAGATATCAGGACTAACATCTGGTTATAATCATTTATCAAAACAACAAAAAGAAAAAATAATTGATTACAATGGTAAAATCGATAATATATCCGATTTTACTAATGTTTATAACGTTACTGTAGAACAAGTAAAAGAATATCTTTCAAATCATAACAACGTTATAATATATGATTATACACCATTTTGTAAGTCTTCTTTATGTTTACCTCTAAACACATTAGAAGATATATGTAAGAAAAACAATACAGATTTACTTGTTATTTCAAACATTTATGATGACATTTTTTTAGGTGTCACAAATAATTTTCCTATTTTAATGATAAAAACAAGTGTATATAATACTAAATCAAGGGCAAAATATATCGATAAATTTTATCAATCTTTAATCGGTTTAAATCAAAAAGAAATTGTTTATGCAAGCTACCATTATTTTCAGAATGGAACTTATATAAA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATGTAGAATCAAGATATAAAGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //