Array 1 100289-98582 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDGZ01000001.1 Corynebacterium sp. LK28 contig02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 100288 29 96.6 32 ............................C CGTGGAGACGTGTTTGAGGCAGGTGCGCACAG 100227 29 96.6 32 ............................T TCATAATGTTCAGCAACCCACCGTTAATCTGC 100166 29 96.6 32 ............................C TCGTGGCTGTCCGGCTCGCTAGGGCGAATCTT 100105 29 96.6 32 ............................T GGATTCGGTAAGTAGCGCCCTTGTGCGACTGG 100044 29 96.6 32 ........A.................... GCGTTCGCAGAGCGCTTGGAGAAGCCCGCGAA 99983 29 96.6 32 ............................C GTGGCTGTGGCAAAGCGTCCTGCAACCCGTTT 99922 29 100.0 32 ............................. GAGCTGGGCAAGTCGCCGGAGGACGTGCAGAA 99861 29 96.6 32 ............................C CTCGGCTGCCTTCTCCTGCGATTTAGCGGAAA 99800 29 96.6 32 ............................T GGTGGGGGGTCTATGGGGGAATCGCTGCACGG 99739 29 100.0 32 ............................. TTTGAGGAAGCGCGCGATCCCGAGAAGGCAGC 99678 29 100.0 32 ............................. ACGTGAAGTCTGATTCCGGTGAGGCTGCTAAG 99617 29 96.6 32 ............................C AACAGGAAAGAAGTATGAACTGCTGGAAGGTA 99556 29 100.0 32 ............................. CTAGTGCCCCACGAGGCGTAAATACCCGCAGC 99495 29 96.6 32 ............................C GACCGATAGCACCCCGCACAATGACCACACAC 99434 29 100.0 32 ............................. CATGAGCGAAGACCACGCCCTGCAGATCGCCT 99373 29 100.0 32 ............................. GAGTACCGACAATGGCTAAGAACCTAGAGCAA 99312 29 96.6 32 ............................T GCCACGGCGTAGCAGACCCAGGACGCCAATGG 99251 29 96.6 32 ............................C ATGTGCAGATTGTCCCCCTCAGACTGGTTCGA 99190 29 100.0 32 ............................. CGGTCGACTTTTCCAACGGTCATGATTCCACC 99129 29 96.6 32 ............................T ACAGGTGCAACGCAATAGGCTGCGAAGAGTCG 99068 29 96.6 32 ............................C AACTCCCGCCTTCGCTTCGCTCAGTTGTGCTG 99007 29 100.0 32 ............................. GATGTAGGGGTGATCCGCGCGGGCGTCGCCCT 98946 29 96.6 32 ............................T TATCGACTAGCTAGCTCACTGCGTGAATCTCG 98884 27 86.2 0 .....................G.C.-..- - C,A [98861,98873] Deletion [98858] 98856 29 89.7 32 ...................C....C...C TATGAGATCGGTAAATCCACCCCACGGAGGTC 98795 29 96.6 32 ............................T GCATACCGTCCCCGCCCGTATACGGGAGTGAT 98734 29 100.0 32 ............................. GTAGCTGACGATAAGACGAAGGCTGCGCAGGC 98673 29 96.6 32 ............................C TGATCCCACCGCTCAGCGAGATCCGCCGTCTC 98612 29 86.2 0 ........................CTTA. | CG [98586] ========== ====== ====== ====== ============================= ================================ ================== 29 29 96.7 31 GTGCTCCCCGCGCCAGCGGGGATGAGCCG # Left flank : ATCGATTCCGAATTGTTGCTCTGGTCGGATTTAGAGGTTGTCGCTTCAGGACATAACTGGTCGAACGAAGGACCAGTGGAATGATGGTTCTGGTTGTTTCTGCGTGCCCTGCAGGACTTCGCGGTGATCTAACACGGTGGCTTTTGGAGATTTCACCGGGAGTGTTCGTGGGGCGTCCCAGCGCCCGAGTGCGTGACCAGGTTTGGGAGCGCACGTGCGATCTGGTGAATGACGGTCGGGCAATCATGGTGTTTCAAGCAGCGAACGAGCAAGGATTTGATTTCAAAACCCACCGGCATAACTGGGTTCCGACTGACTTCGACGGAGTGAACCTGATTACGCGACCGAATAACCGAGCACCATCATCACGACGGCGTGGGTGGAGCAAAGCACGGCGAAGATAGATGCGTGGGATGCAGTTCGCGGGTCCAGCGGCTGGTAGTTAAAACAAGTTGAACTAGAATCGGCTTTAAGGCTCAAAGAACCACAGCTCAGAGAGT # Right flank : GCCCGTTCTAGCGACAATCTGGACGGCTCGCTGCAGGGGATTTACTTAACCGGAACCTCTTTTCGCAGGAATGCCAGCTGCTCCTCAATGATCTCCGAGAACAGCGGCTCCACGTAGGGGTCGAAGTGGCCGCCCTCGTGAATGTGAATCGTAGCGCGCTGGACCTTGCCAGCTGCTTTGAGAGCGACATTTGTTGGAGTGACGGCGTCATGAGACATCACCTGGAAAAGCGCCGGGCAGGAAACATTCCCGGCCGTCCGCGCCGGCGAATAGAAACCAATCAACGCCAGAATGCTGTTCGACGTGGCCGGTGTACCAACTCACGCGCCTATTCTTCCGCTTCTATAGGTAGGGGAAATAGGCTCTGACGTGCCGTTTTCTGTGGGGCCAGCGGGGCTCGAACCCGCGACCAGCGGATTATGAGTCCGCGGCTCTAACCGACTGAGCTATAGCCCCAGTATGCGTCGCCACTCGATGGAGTGGCTTGCTAACAAAAGATT # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:-0.09, 8:1, 9:0.42, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //