Array 1 319415-320675 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAELWM010000006.1 Enterobacter hormaechei strain 184B8 184B8_S79_R1_(paired)_contig_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================= ================== 319415 28 100.0 32 ............................ GTGTTAACTCGCGATGGTGGTGGCCATGTTGG 319475 28 100.0 65 ............................ NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 319568 28 100.0 32 ............................ AATCAGCAGCTGATCCATACAAGGGTTCTTTT 319628 28 100.0 32 ............................ CGTAGACACAGCGGCAACAAAGCGATCGTAAA 319688 28 100.0 32 ............................ TGACGACGGCACGACTGTCGCGATGTTTTTAT 319748 28 100.0 32 ............................ TCGCACGGACGGTGATCCGTTGGGCATGAATC 319808 28 100.0 32 ............................ GTCCAGGTCTGCGGTGAGCGCTTTTAGTTGCT 319868 28 100.0 32 ............................ ATTACCATCCGGGCCTTTACCGTTTACTGTTT 319928 28 100.0 32 ............................ AGCAGGTAGACGACGCGCGCCACAGACTGTGT 319988 28 100.0 32 ............................ CTTCCCGCGTCGGTCACGCAATCGGACATGAC 320048 28 100.0 32 ............................ AGTTCAAGGCTGGCATCTTTGAGCAGTATTAC 320108 28 100.0 32 ............................ GTGGAGTTCGCCCGTTTCTGGGTCGAAGACCA 320168 28 100.0 32 ............................ GCATTTTGAGGCCCATCGTTTTGATGGTCTTC 320228 28 100.0 32 ............................ ATCGCATCCTTGACGGGCTTCGCCAGCGCAAG 320288 28 100.0 32 ............................ TTTGAAGCCGGTATAAGTATCTGCACCAAATG 320348 28 100.0 32 ............................ CATAACGACACCTTTCAAAATCGTTAATTAAC 320408 28 100.0 32 ............................ TGATTGAGCATTAACAGGGGCAGACTGTAGAC 320468 28 100.0 32 ............................ CTGACGGGTCCCGATTTTGCGCTGGGCGTGAA 320528 28 100.0 32 ............................ CTGCTCTTCGCGAAGACCAGTTAAAACATAAC 320588 28 100.0 32 ............................ GTAGACCCCGCGATGAATATTCCATACTTAGA 320648 28 78.6 0 ...................T.A..CCCC | ========== ====== ====== ====== ============================ ================================================================= ================== 21 28 99.0 34 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGTCTTGGTGCTTATCTGGACGTAGTCAAAACTGAACTCGCAGAATCAATGTGTGATTTCCGGGTAGTTGAATTTGACGACGAGGCGGAACGGCCGAAGGAAAAAGAGTGGCTTCTGGAGGATACCGAAACCAAATGCGATTACTGCCGGGCATTAAACCACGCGCTGCTGGTGTCGTATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACATATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAGCCTGTAATTCATATCATTAATTAAGTTTAGTGTCGTGCGTCGGGGGAGGGGTTCCGGCGCGGTATGGCGAAACCCTTTTTTCGAGCGGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCCAAATATTCACTCCAGCTATTTTAAAACCCATAATCATCACCACAATCCTCTTTGTATTTTAAATAAAATCAATACTCATTCACCCCACAACCATATTTCCTCATATATATTATTCACAAAAATAATACATTAAATATGTCAGAGGTTTTTTATCTCGATATTCCGACAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTAATCTCCGCTAACATACCTCGCATTCAACATATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCATCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTAGAGAAATGCCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCTTTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTAATGTTGGGAATGGGAACATCCGTGACGCAAATGGCGATGCGGGAGTTCGCGCGAGC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 330152-331018 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAELWM010000006.1 Enterobacter hormaechei strain 184B8 184B8_S79_R1_(paired)_contig_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 330152 28 100.0 32 ............................ TCCTCCAGTGCCGCGCCTTCGATCGCTTCACC 330212 28 100.0 32 ............................ AGCACGAATACAAAAGCAGTAGTCATCAACTT 330272 28 100.0 32 ............................ CTCAGCTGTAATGCGCTCCACGCTGTTGATAC 330332 28 100.0 32 ............................ TCCATCGCTACGGCCTGGTTGATTACCATTTT 330392 28 100.0 32 ............................ GGTGAGCGCAGCAGCATGACGGCGCTGAAGAA 330452 28 100.0 32 ............................ ATTGCACTGAAACTATCCAGCGCACGGAAAAA 330512 28 100.0 32 ............................ GTTATGGATTTCGACGCCAGTAGGGAATGACA 330572 28 96.4 32 ..........A................. TGACTGCCCAGGGTGATTTTGTACCGCCGAAA 330632 28 100.0 32 ............................ AGTCGAATTGTTGCCAGTCGGCTTTATCCATA 330692 28 100.0 32 ............................ TGGAGCCTGAAAGGTGATGCGCCAGCTCCGGC 330752 28 100.0 32 ............................ GACAACATCAACAATCGTCATTGCTGCCATCA 330812 28 100.0 32 ............................ GATGGGGAGCGGCAAAACACAGGCGCTGCTTC 330872 28 100.0 32 ............................ GCTACGGCTGCGGGTATGAATCCGGTTTTATC 330932 28 100.0 32 ............................ TCATCGAGTGTAAGGCTGTGTGATTTTATTGT 330992 27 71.4 0 ......CA.......AC..A.AC.-... | ========== ====== ====== ====== ============================ ================================ ================== 15 28 97.9 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTGATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCTATCAGCCGCATGCCTCTGCTTGCAGGCAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTGAGGGGGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGACCCTAATTTTTGACCAAAATGTAATCTATTGATTTTTCGGTTAAATATCCTGGAGCGCAAAAAAAGGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGGTATTATTTCA # Right flank : ACCCGAAACAACCCAACCAATCGTTCAAATAATCGACTGTACTAACAAAAAAATAAGGCCGGGTATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCGTATTGCCCAAGCGTCACGGTACAACCGAACAGAAAGCGCATTCGTAAAGGGGAGACGACA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //