Array 1 149076-148463 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP013615.1 Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	==============================	====================================	==================
    149075	    30	 100.0	    36	..............................	GTCGGAAAACTCTTATATTTCCTACTATTAAATTCA	
    149009	    30	 100.0	    36	..............................	AAAAGGTATAAGGGAAGAGTTGTTATTCATATATAG	
    148943	    30	 100.0	    36	..............................	ATACTCCTAATTTTTATATAAAGCATATGAAAAAAA	
    148877	    30	 100.0	    35	..............................	ATATAAAATAAAAAAAGATGTTTATTATGAAGAGT 	
    148812	    30	  96.7	    35	.............................C	TTAGATACTTCTTTCAAAAAGTACGTTAATATTGT 	
    148747	    30	  86.7	    36	...........G...TA.C...........	TATTGCAATATTAATTTAGAAGTAATAGAAGATGAA	
    148681	    30	 100.0	    36	..............................	TCTAAATACTGGTTTATGTATTTAGCCTTAACTCCA	
    148615	    30	 100.0	    31	..............................	AGATAAGAGCGTTTCAGAAGCTTTAAGCTCT     	
    148554	    30	  96.7	    33	...C..........................	ATATGCAAAACACCCACTTAGGTGTAAAGAAAA   	
    148491	    29	  86.7	     0	...............TA........-..T.	|                                   	
==========	======	======	======	==============================	====================================	==================
        10	    30	  96.7	    35	ATTTAACTTTAACAAGTGTTGTATTGAAAT	                                    	       

# Left flank :   CTCATTTCAGTATATAATTTAAACTTTATTCAAAAAAAGAACAACTTAGATACAATACCTAATGTTGTTCTTTTTGATTTATATTTTAATAATTGTAATAACTTGGGGGAAGCTATTGCCAAAAAAAATATAAACAACTCATTTTATTTAACTTATAATATTATGAATTTCTGACTTTATTATAATTTCTTTTTTGACTATTGTCAATAATAAATTATTATCTAAAAAATTATAATTTTCATATATACAATTACTTAATAAACCTATATACATTTCAAACGTAATTGACAAAATTATTGTTTAAATATATAATTTTTGTATAAGTTTTACCAGTAATTTTTAATAAAAATTATCTTAAAAGCATTGATATATCTTTATTTAAGCACTATTTAAGGCTTTTATAATATTAATTTTGTATTGACTGGTAAAATTTAATATAAATATAGGCACATTCTACTTTTAGAGTTTTTTTATTTTTTAAGAATGGCTTGTTTTCAAGT
# Right flank :  ATGAAAATAGCAATTATATATCTATGTAATTGCTATTTTTTATTTTTAAAGCAATTTACTAATATAAAAAATTATAATTTTAGTATTTCTTTATATAATATATAGAAACTAAATTATAGAAAGGATTAAATATAAAAAAAATAAAATACAAAAGATAATATATAGTAAAGGTTATGTAAGTATAGAAACTTTAATAGTAACAGGTCTTATAATAGCCACAGGAGCTTTCCTAATATCTAAATTAGTACTGAAAGGCAAAGATGTTGCTATATCAAATGATAACAATATGATTAATGCAGGTAAAGTTATAGATAATACTTCATTCAGTAATAATACTTCTGAAAACTCTATAGCTAAAATTCAATCACCTATCAAAGAGGAATCTACACATAATATAGAAAATACATCTGATTTAGCTGACTATAATTATGCTATTATAGATGATAAACTTATTGAAGAACAAATAAAAATTAGAAATAGTCTAATCGATTCAGGAGATT

# Questionable array : NO	 Score: 9.10
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTTAACTTTAACAAGTGTTGTATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:80.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-1.20,-0.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [83.3-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,4.91   Confidence: HIGH] 

# Array family : NA
//