Array 1 876847-870510 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGLH01000003.1 Bifidobacterium asteroides strain ESL0170 Ga0133549_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 876846 32 100.0 35 ................................ GTTCCTGCTGCGGGTTCCGGGGAGGCGTTGTAGTC 876779 32 100.0 35 ................................ CCGCCAACCACATACATGTAGTCGGGAGGCAGCTC 876712 32 100.0 34 ................................ CGTAGGCCACACAACCGCCTCTTACAAGGTCGAT 876646 32 100.0 35 ................................ TTGAAACAAAAAAGTAGAAATTAAGGAAGAATGAT 876579 32 100.0 35 ................................ AAGGCAAGCAGAATACGGCTCCCACTGCCCGGCTC 876512 32 100.0 33 ................................ CCGGAGACTCGGGGTTGGTGTCCACATTCGGGG 876447 32 100.0 35 ................................ TCCGAAAAATATGGTCCGTCATTGACCATGGTCAT 876380 32 100.0 34 ................................ CCGATTGCTGTCGGAACCGTTCCCGCCATTGCTG 876314 32 100.0 34 ................................ GCTGTCCGTCACCAGGTCGTATCTGGCCCAGCAG 876248 32 100.0 36 ................................ CCGGGGCATCGGCAAAACCTATGCATGGTCGCGCTG 876180 32 100.0 34 ................................ CGCTCTACGACGATTCGCCCATGGTGGTGTGCGC 876114 32 100.0 36 ................................ TGCTTTTCGTCGCATTGGATGATCAATGGTACACTC 876046 32 100.0 34 ................................ GTAACGGAATTGAATTTCAGCCCGAACACTCCCG 875980 32 100.0 34 ................................ TTGTACCATTCGGCTAATTGGGCGGGGCTTGTCT 875914 32 100.0 36 ................................ AGAAGAACCTCCCTCATCCTGTTCGCATGGACACGG 875846 32 100.0 33 ................................ ACAAAATTTGCGCCGACATTGCTTTCCGTATTC 875781 32 100.0 34 ................................ TGTGTGCATGTGCCGGCCATGTCGGGTGACACCG 875715 32 100.0 34 ................................ GCGTCCACATGGCAGGGGATGCGGATGAGCCTGC 875649 32 100.0 34 ................................ CTGACGCTCGTCCGCATGCTCATCGTCTGCCCAG 875583 32 100.0 35 ................................ TCAAAAGCCATCCGCACAGGCCGCCCACCCCGGTC 875516 32 100.0 34 ................................ CGCCTGCCCGTCGGCGAGTCGACCATCCGCTACT 875450 32 100.0 34 ................................ TGGATGGCGAAATGCCGGCTGGTGGTCGTCACGA 875384 32 100.0 34 ................................ TTCATGGCCCGTTCCAAGGACGATCCTTCACGTC 875318 32 100.0 34 ................................ CTGCCTAACGCGGGTCATAGGGCGGGGTCGATAG 875252 32 100.0 34 ................................ CTCAAGAATGGCGGAATATCAACAGTTATAGCAC 875186 32 100.0 34 ................................ TGGTACGTTTTGGCTTGAGCGAGGGCATTGGCAT 875120 32 100.0 35 ................................ ACGTCGCCGGAGCGCATCCAGTCGGTGCCCGGGTG 875053 32 100.0 34 ................................ GGGTAGATGCTCATCAGCTGCTCGTACTCGGATG 874987 32 100.0 33 ................................ TATTGGAGTCTATTGTTTCAGTAGAGTCTATGC 874922 32 100.0 35 ................................ CGTGTGGTCGACGAGGGGCAGGACACCTATGTGGA 874855 32 100.0 34 ................................ TATAATGTGCCGAAAGTGACGATAACCAAGCGTG 874789 32 100.0 35 ................................ CATTGTGTCGCTGAGCATGTCGTATAGGTCTTTAT 874722 32 100.0 33 ................................ CTGGCGGACGGCGGCCAGGTGGCCGACCTGATG 874657 32 100.0 34 ................................ TGGTATGCCTCGTTGCTGTAGGGGTCCCAGTAGA 874591 32 100.0 34 ................................ TTCAAAACCGCATGGTCCAAGGTCACCGGAGTTG 874525 32 100.0 36 ................................ CTGGTTGGTGGCCGTTGTGTTGTAGCTGTTCTGCAG 874457 32 100.0 34 ................................ TGATGAATATGATGAATTTAATATCATGAAGAAT 874391 32 100.0 35 ................................ ATATCGCCTATCTGGCCGATCGCCTTGTCCGCGCG 874324 32 100.0 36 ................................ GTGAAACCAGCCACCAGATCCAGCAGGGGGCCTCCA 874256 32 100.0 33 ................................ ACCCACAGCACGTCTATCGCTCCGGTCTTGGTC 874191 32 100.0 33 ................................ TACAAGGAGCGCGTGCATATCGCCCAGAAGCCC 874126 32 100.0 34 ................................ CACCGGTACGTGACCCTGGTCGAAGCATGACGGG 874060 32 100.0 33 ................................ GTCGACATCGGCAAAAACATGATCATAGGCCTG 873995 32 100.0 33 ................................ GGGAGACCGGAGCGGGGGCGTTTTTTGTTTGTT 873930 32 100.0 35 ................................ TCGCGTATTCGGGGGGAGGTGAAGCATGAGGAATC 873863 32 100.0 34 ................................ CGGTTACGAGTTTGACCACAAGCCACTCAGTGTC 873797 32 100.0 35 ................................ AGCTTGGGTGAGATTATCCGAATCAGCAGCCACCT 873730 32 100.0 35 ................................ TGTTGCCGAATACGGTCAGCTTGTATGGCTTAAAC 873663 32 100.0 36 ................................ GCCGTGCGAGCTGATTTTCAACGCCGGTGCCTCGAA 873595 32 100.0 34 ................................ TCCCTGCCGACGCCTACTCCCTAAGCACCCAGCG 873529 32 100.0 34 ................................ CTTCTCAGCCTTGATCTCCTCCGCTGTGGGCTCC 873463 32 100.0 35 ................................ AGGGATTTCCTTCATATCGTCGGATTCCGCGTCTT 873396 32 100.0 34 ................................ ATGGCTCCGGGAAGTAAATCAACATAGACATCCA 873330 32 100.0 34 ................................ TGGTGCCCACTCCGGGTGACGTGACGGACTACTC 873264 32 100.0 34 ................................ GCGGGCTCCCTGTCCACGGTGCTGCCTGTCGCGT 873198 32 100.0 34 ................................ CGGGCGGTGCGCAGCCCGCCGCGCCCGGCCATCT 873132 32 100.0 35 ................................ TTAACAAGTCGAAGCTCAAGGCTCATGAGCTTGGC 873065 32 100.0 34 ................................ ATGACTGCTCCTCGCTATAGGGTCCCCAGGCTTT 872999 32 100.0 33 ................................ GTGGAACGCGGCCATATCGGAATCGCCAACGAA 872934 32 100.0 34 ................................ CCTGGTTGTTGACCATGACCAGGCGCGGCCAGTC 872868 32 100.0 34 ................................ ATGACCCCTGAGGTTCATGCCGCCATCGACGTGA 872802 32 100.0 35 ................................ ACTGAGCTGATGAAGGCGGCGATCCAGGGCCGCAG 872735 32 100.0 35 ................................ TCCGGCGAGACCAGCGTGCCCGTCAGCTCTCTGGG 872668 32 100.0 34 ................................ GTCGTGGTACCCGCCGACCCTGCTGTATTGTCTG 872602 32 100.0 35 ................................ CAGCGGTGGTACGGGCTTGACCTGGACGATCTGGG 872535 32 100.0 35 ................................ CTCGACCCCACGATCAGCACGGGCCCGTTCCACCG 872468 32 100.0 35 ................................ GGTGCGGATCATGAGCATGGCCTGCTGGGGCGTGA 872401 32 100.0 35 ................................ AGCCAATCTTTGAGTAGTGGGGACTTGGTGGTGGG 872334 32 100.0 35 ................................ CACTGGCTGTACGACAGTGCGATCCGACCGGTATG 872267 32 100.0 34 ................................ CGGTACAGCGTGCCGCCCTCCCGGGCGGGCAGGC 872201 32 100.0 36 ................................ TATGCTCCTCTGCATAGCGGTCCACGAATTCCTGAT 872133 32 100.0 35 ................................ GGCGAGGCGAACGCCTACACGGAGGCCCTGCGCGC 872066 32 100.0 35 ................................ TCGACCACGCCCTTGGTCGTCACGTACCCCATCTG 871999 32 100.0 34 ................................ CTGGATTGGGAGCCGCCAGCAAGCCATAGGGGTG 871933 32 96.9 34 ......................A......... TGGTTCGTTTTGAAAGTCTTGCCGAAAGAAACGA 871867 32 100.0 34 ................................ CATGTGCCCGGTTCCACGCCAGGCGGCGACACCG 871801 32 96.9 35 ........T....................... TCGTAAGGTTTCGGCAGTCCAGCCTCGTCAGGGTG 871734 32 100.0 35 ................................ CACCCTCCAACGGGGCTCGCTGCCATGCTTCGCAG 871667 32 100.0 34 ................................ CCAGCGTCCGGAGGAGGAGTAGCATGGGGTGGCC 871601 32 100.0 35 ................................ ATCATCGACCTGGCCGACTGGAGGCAAGGCGGACG 871534 32 100.0 35 ................................ ACCGAGGTCATCAAGCGAGAAGCGCCAGAGGATTA 871467 32 100.0 34 ................................ CATTAGACTGAGAAATAAATACATCACCAGTATC 871401 32 100.0 33 ................................ ACAAAATCATCACAAATGGGCGCCGCCACACAA 871336 32 100.0 36 ................................ ACCGACTCTCACAGGACGCTCAGCAAGGTGCTGCTG 871268 32 100.0 33 ................................ TATTGTCCTGACCATTGGTGCATAGACCATGAT 871203 32 100.0 34 ................................ GTCGCTGACCCCTTCCGAGAAGGATTTGTGCGTG 871137 32 100.0 35 ................................ CCTGACTCTCAAGGTAGGAATCCAGAAGGTTTCTC 871070 32 100.0 34 ................................ CTTTGCGCAGCCAGTCAGCGCTGATGATGCGCAT 871004 32 100.0 35 ................................ ACGATACCTCGCGGCGACACCGGCCTGCAGGGCCC 870937 32 100.0 34 ................................ AAGGACATGCTGGTCACGTCCACTCAGGGCACTG 870871 32 100.0 33 ................................ ATCAACATTTGTAAATTTCATAGGTGCATGCCC 870806 32 100.0 34 ................................ TTGATCGAATCCCTCAGGACATGCCGCTTGGCAT 870740 32 100.0 33 ................................ ATTGGTCATGAGCGTATTGACCAGATTGGCTGT 870675 32 100.0 34 ................................ TGGATCAAGACGGCCAGGGGCTTGTGAATAATCG 870609 32 93.8 35 ............G...........G....... TACGACACCGTGGCGCTTTCCACCCTTCGGCAGTG 870542 32 81.2 0 ...A..........A.A...A..A.......A | G [870513] ========== ====== ====== ====== ================================ ==================================== ================== 96 32 99.7 34 GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Left flank : CATCAGCTTGCCGCTATGACCGGCCTGGGGGAGCGCAGCTTCATTAGGGTATTCAAAAGGGCAACCGGTTATACGCCTCATGCCTATGTTATGGATGCGCGCATCAATTCGGCTCGAAGCATGCTCAGCAATTCCTCCAAGCCTGTCGAGCAGATAGCCCTAAATTGCGGGTATTCCAAGCTGTCCGTCTTTTGCAGCGCTTTTAAGTCAAAAGTAGGTATGTCTCCTATGGAGTACCGTCGTCGTACTTTGTAAATATTGTAAATGATGGATTAAATCGATGACCGCGTCAAGCACATATTCCGTAATGAAGAGTATCTTGGTGGAGTCCGTTATGTTTCATAGTCCAGCTGTAGTTAAGAGACTCCTATGGATAATTGCATCTGGTCTGTATAGTATGTGCTCTGTAATGAAATTGGCATAACATGCATAGACGGATTAAGTCGCCATGAGGCGAGGGTTGAAATATTACCACATCACGGGCATCAACAAAATGTCGC # Right flank : CCGATTGTGCTACTTTGAATTACCCAGACAGCATTGTTTTCTAGCGGGGACATGCAGTAAATCTGTTCTTTCCTCAGAACTCTGTTATGAATTGTATTCCTTCTAAACATGAGTATGAGTTGCTGCACGGGCATAGTGTCAATCTTTTTTATGTCATTCTCTTGCTCATAGCCGCGAGAATGATCCCAAGCAGTGGACCCGGACCTGAACCTTTCAGTAGTATAGAAATACTAATGGTGCTCTCAGCATCCGCGGGAATGATTCTGCAGGACATCGGATGGATGCCCTGTAGATTCACAAAGATGAGAGGAGATGAATGGCTATGGATGAGGATTTCATGAGAAAAATGGCATCCAAGGAAAAGGCCTGTACCACTTATGACCATATTCCCCAGAAGAGGATCGATGACTATGCATCAGAGCATCCTATCACTGACGACATGGATGATGTAGAGCGCCGGGTCTGGGATTCGCTGGATGATGAGGACAGGCGAATGATCC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //