Array 1 45431-46847 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJJF01000006.1 Campylobacter lanienae strain P0034 .11822_4_26.6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 45431 37 100.0 35 ..................................... ACAAGGCATTAGGTCAGCTCAAGCAGCTAGAAGAC 45503 37 100.0 35 ..................................... ACAAGGCATTAGGTCAGCTCAAGCAGCTAGAAGAC 45575 37 100.0 37 ..................................... AATTAAATCGCTTTTGATAATCTCGCTTCTAAATCTT 45649 37 100.0 37 ..................................... AGAATTAGCGGATTTATTGGAAGCTATGGCGAGTGGT 45723 37 100.0 35 ..................................... TAATGATGATTTAGAAATTCAAAGATTTATCAAGC 45795 37 100.0 35 ..................................... AAAGATATTTTCACAGCCTTAATGCGTGATTTTGC 45867 37 100.0 35 ..................................... AAAATATAATTTATAAGAATAGCCACCACGAATGA 45939 37 100.0 36 ..................................... TGATTCATAACTGGGTCTTGATTATGATTCATAACT 46012 37 100.0 38 ..................................... TGAAACGATAGACAAACGTGAAATCATTAAAGAAATAA 46087 37 100.0 35 ..................................... GAATTAATCGCTAAAAAAGAAGCTAATCAATAAAG 46159 37 100.0 35 ..................................... TTATAATGGTTATAAAGGTAAAATCATCACTAAAG 46231 37 100.0 36 ..................................... ATACAAGCAGCTCTATACTTAGAAATTACAGAGTAT 46304 37 100.0 35 ..................................... AGTTGGTAGCACTTCGTTACATATCCAATCTTGAA 46376 37 100.0 37 ..................................... CATAACCTTGAAAATAATAAAGCAAGTCTTCAAATAT 46450 37 100.0 36 ..................................... TAGGCGTATTTGTTGTGTTGATTCTCAAACCTTGAT 46523 37 100.0 35 ..................................... AAATATCAAAAAAGCGGTTGATTTAGATAATCAAT 46595 37 100.0 35 ..................................... ACTTGGTCGCTCTAAAGAGTGTAAAGTGTATTATG 46667 37 100.0 35 ..................................... ACTAATCTCGTCCCAATTTACTTTTTTAGCTTGTT 46739 37 100.0 35 ..................................... CAGGGCTAAAATGATAGCACGAGACCAAACGCAAA 46811 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 20 37 100.0 36 GTTTCAAACCAAGTTGGATTGTGGTATAATTTGCAAC # Left flank : TTATAAGAGAGAGAAAAAAACTTCTCTTACTCTAAATCTAAAATAAGAGAAAATGAAGTTAAAGATAAAGAGATTTATTTGGGGAGATGATTAATAGCAATAATACATTATCATAATAATTATTTATAAATCTAAAAATTTTTTTTAATTTTTGATATTTTTAAATAATTCTATTATTTATAGCTTGAGTTAATATTTCCATTTTACTCTCCTAAAAATTGTTTAAAAACTTCTCTACATTATCACGCTCACAATATTTATAATATTGTGTAGCGATACGCATTAAAATCATCTCTCTCTTAAACTTATCAGCTCTGGCTCATCACTTTGATAAATTTTATATAACGAAGCATTTACTAAATCTATATCATCAAAATTAGCCGCTATACCTAATTCTGGGGCAATCTCATCATAAAATAGCTCTATTTGCTCCTCTTTTGTAAGCACAATTCTAAAAGCATTTATAAAGTCTTGAGTGTTTGTAAAATTTTTGTATTTGT # Right flank : CTGCGCACAAAATGCCCTGTTTTAGGGATTTTGTGCTTAGTTAATTGTAAAATTTTTTCCACTTAGAAAAAAATCGCAAAAAGTGGCGAATTTGTGGAAAAATATGTTATAATCCAAGCGCAAATTATACCATAATCTAGCTTATAGCGTTTGAAATCACCACAAGGTGTTTTCATATCGGGGCAACTGCCTTTGGCACCCCCGGTTATTCTCTATCATCACAATAATTTTTAAACTCACATTGCGCACAAGCTGTAATGCTAGCTGAGCTTTGGGGGAAATATCCTTTTTCTAATAGATCTTGAATTTGCGTTAGTGTTTTATCAAAATAAGCTAAATCCTCTTGATAAATTTCAAAGATTTTAAATTTTAGATTATTTGAGTAGCATAAAATCACCCTATGAAAAGGCTTTTTAAAGTGTTTGCTAGCAAGTTTAGAATATGCTATAAGCTGCATTTTTGCGCCCTTGCTTAAAATTGGCTTTGATTGGTTTTTAAAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAACCAAGTTGGATTGTGGTATAATTTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //