Array 1 1271020-1273547 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012745.1 Klebsiella pneumoniae subsp. pneumoniae strain TGH13 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1271020 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 1271081 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 1271142 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 1271203 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 1271265 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 1271326 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 1271387 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 1271448 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 1271509 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 1271570 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 1271631 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 1271692 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 1271753 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 1271814 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 1271875 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 1271936 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 1271997 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 1272058 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 1272119 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 1272180 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 1272241 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 1272302 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 1272363 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 1272424 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 1272485 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 1272546 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 1272607 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 1272668 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 1272729 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 1272790 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 1272851 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 1272912 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 1272973 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 1273034 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 1273095 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 1273156 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 1273217 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 1273278 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 1273339 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 1273400 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 1273461 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 1273519 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //